ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U0B:A14:A45

Extra

PDB:
ATOM 1 O3' A A 13 75.668 41.497 -2.681 1.00 37.48 O
ATOM 2 P G A 14 76.774 42.210 -1.757 1.00 38.23 P
ATOM 3 OP1 G A 14 77.881 41.238 -1.675 1.00 36.91 O
ATOM 4 OP2 G A 14 76.166 42.727 -0.518 1.00 38.79 O
ATOM 5 O5' G A 14 77.242 43.478 -2.599 1.00 38.17 O
ATOM 6 C5' G A 14 77.909 43.329 -3.846 1.00 40.70 C
ATOM 7 C4' G A 14 78.060 44.674 -4.494 1.00 39.89 C
ATOM 8 O4' G A 14 76.728 45.186 -4.760 1.00 41.01 O
ATOM 9 C3' G A 14 78.699 45.736 -3.608 1.00 41.53 C
ATOM 10 O3' G A 14 80.116 45.733 -3.711 1.00 40.04 O
ATOM 11 C2' G A 14 78.117 47.021 -4.176 1.00 41.17 C
ATOM 12 O2' G A 14 78.776 47.437 -5.356 1.00 44.17 O
ATOM 13 C1' G A 14 76.691 46.580 -4.508 1.00 42.05 C
ATOM 14 N9 G A 14 75.768 46.823 -3.405 1.00 44.69 N
ATOM 15 C8 G A 14 75.400 45.944 -2.418 1.00 44.80 C
ATOM 16 N7 G A 14 74.560 46.461 -1.562 1.00 45.56 N
ATOM 17 C5 G A 14 74.360 47.758 -2.016 1.00 47.36 C
ATOM 18 C6 G A 14 73.539 48.797 -1.504 1.00 48.89 C
ATOM 19 O6 G A 14 72.813 48.781 -0.514 1.00 51.44 O
ATOM 20 N1 G A 14 73.622 49.947 -2.279 1.00 46.35 N
ATOM 21 C2 G A 14 74.401 50.085 -3.400 1.00 47.00 C
ATOM 22 N2 G A 14 74.348 51.272 -4.019 1.00 45.34 N
ATOM 23 N3 G A 14 75.175 49.129 -3.884 1.00 45.49 N
ATOM 24 C4 G A 14 75.100 47.998 -3.150 1.00 44.73 C
ATOM 25 P C A 15 81.001 46.215 -2.461 1.00 44.10 P
ATOM 26 OP1 C A 15 82.417 45.948 -2.794 1.00 45.74 O
ATOM 27 OP2 C A 15 80.427 45.641 -1.219 1.00 43.95 O
ATOM 28 O5' C A 15 80.769 47.793 -2.405 1.00 50.26 O
TER

ATOM 1 O3' A B 44 64.157 52.773 5.144 1.00 54.74 O
ATOM 2 P G B 45 65.076 53.610 6.168 1.00 56.53 P
ATOM 3 OP1 G B 45 64.134 54.078 7.214 1.00 59.86 O
ATOM 4 OP2 G B 45 65.884 54.598 5.419 1.00 54.00 O
ATOM 5 O5' G B 45 66.059 52.509 6.777 1.00 60.15 O
ATOM 6 C5' G B 45 65.584 51.189 7.073 1.00 60.41 C
ATOM 7 C4' G B 45 66.633 50.156 6.694 1.00 61.66 C
ATOM 8 O4' G B 45 66.831 50.190 5.262 1.00 62.20 O
ATOM 9 C3' G B 45 68.010 50.384 7.304 1.00 62.92 C
ATOM 10 O3' G B 45 68.049 49.754 8.604 1.00 66.28 O
ATOM 11 C2' G B 45 69.002 49.866 6.257 1.00 61.62 C
ATOM 12 O2' G B 45 69.552 48.591 6.465 1.00 67.66 O
ATOM 13 C1' G B 45 68.169 49.866 4.970 1.00 60.22 C
ATOM 14 N9 G B 45 68.624 50.717 3.875 1.00 57.29 N
ATOM 15 C8 G B 45 68.363 52.053 3.676 1.00 58.27 C
ATOM 16 N7 G B 45 68.929 52.529 2.595 1.00 55.79 N
ATOM 17 C5 G B 45 69.599 51.440 2.053 1.00 55.84 C
ATOM 18 C6 G B 45 70.411 51.342 0.892 1.00 55.13 C
ATOM 19 O6 G B 45 70.729 52.239 0.092 1.00 54.73 O
ATOM 20 N1 G B 45 70.884 50.043 0.710 1.00 52.97 N
ATOM 21 C2 G B 45 70.624 48.980 1.544 1.00 54.07 C
ATOM 22 N2 G B 45 71.169 47.791 1.202 1.00 50.66 N
ATOM 23 N3 G B 45 69.884 49.067 2.635 1.00 54.97 N
ATOM 24 C4 G B 45 69.410 50.312 2.827 1.00 55.82 C
ATOM 25 P U B 46 68.088 48.136 8.741 1.00 63.78 P
ATOM 26 OP1 U B 46 69.406 47.761 9.317 1.00 61.69 O
ATOM 27 OP2 U B 46 67.643 47.521 7.464 1.00 62.66 O
ATOM 28 O5' U B 46 67.019 47.809 9.876 1.00 63.89 O
TER

Atoms:
OP1: (77.881,41.238,-1.675)
OP2: (76.166,42.727,-0.518)
C3': (78.699,45.736,-3.608)
C1': (76.691,46.580,-4.508)
C5': (77.909,43.329,-3.846)
O6: (72.813,48.781,-0.514)
O4': (76.728,45.186,-4.760)
C8: (75.400,45.944,-2.418)
C2: (74.401,50.085,-3.400)
C6: (73.539,48.797,-1.504)
C5: (74.360,47.758,-2.016)
C4: (75.100,47.998,-3.150)
P: (76.774,42.210,-1.757)
C4': (78.060,44.674,-4.494)
C2': (78.117,47.021,-4.176)
O2': (78.776,47.437,-5.356)
N1: (73.622,49.947,-2.279)
N2: (74.348,51.272,-4.019)
N3: (75.175,49.129,-3.884)
N7: (74.560,46.461,-1.562)
N9: (75.768,46.823,-3.405)
O5': (77.242,43.478,-2.599)
O3': (80.116,45.733,-3.711)
OP1: (64.134,54.078,7.214)
OP2: (65.884,54.598,5.419)
C3': (68.010,50.384,7.304)
C1': (68.169,49.866,4.970)
C5': (65.584,51.189,7.073)
O6: (70.729,52.239,0.092)
O4': (66.831,50.190,5.262)
C8: (68.363,52.053,3.676)
C2: (70.624,48.980,1.544)
C6: (70.411,51.342,0.892)
C5: (69.599,51.440,2.053)
C4: (69.410,50.312,2.827)
P: (65.076,53.610,6.168)
C4': (66.633,50.156,6.694)
C2': (69.002,49.866,6.257)
O2': (69.552,48.591,6.465)
N1: (70.884,50.043,0.710)
N2: (71.169,47.791,1.202)
N3: (69.884,49.067,2.635)
N7: (68.929,52.529,2.595)
N9: (68.624,50.717,3.875)
O5': (66.059,52.509,6.777)
O3': (68.049,49.754,8.604)
Image (generated by PyMOL):
PyMOL image
show in jmol