Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0492:0500
Extra
PDB:
ATOM 1 O3' G A 491 11.923 167.999 63.343 1.00 55.63 O
ATOM 2 P G A 492 11.534 166.718 62.450 1.00 55.53 P
ATOM 3 OP1 G A 492 10.175 166.993 61.914 1.00 57.32 O
ATOM 4 OP2 G A 492 11.779 165.472 63.218 1.00 53.58 O
ATOM 5 O5' G A 492 12.556 166.758 61.233 1.00 51.73 O
ATOM 6 C5' G A 492 12.426 167.735 60.196 1.00 49.26 C
ATOM 7 C4' G A 492 13.483 167.518 59.146 1.00 49.95 C
ATOM 8 O4' G A 492 14.795 167.660 59.758 1.00 51.01 O
ATOM 9 C3' G A 492 13.520 166.127 58.538 1.00 50.56 C
ATOM 10 O3' G A 492 12.549 165.946 57.521 1.00 51.87 O
ATOM 11 C2' G A 492 14.950 166.052 58.023 1.00 51.01 C
ATOM 12 O2' G A 492 15.152 166.777 56.825 1.00 50.56 O
ATOM 13 C1' G A 492 15.701 166.736 59.168 1.00 49.95 C
ATOM 14 N9 G A 492 16.113 165.768 60.187 1.00 49.59 N
ATOM 15 C8 G A 492 15.685 165.678 61.495 1.00 47.90 C
ATOM 16 N7 G A 492 16.219 164.677 62.141 1.00 46.50 N
ATOM 17 C5 G A 492 17.055 164.072 61.208 1.00 46.73 C
ATOM 18 C6 G A 492 17.892 162.933 61.322 1.00 45.20 C
ATOM 19 O6 G A 492 18.074 162.207 62.304 1.00 45.17 O
ATOM 20 N1 G A 492 18.557 162.667 60.130 1.00 44.42 N
ATOM 21 C2 G A 492 18.434 163.401 58.974 1.00 44.84 C
ATOM 22 N2 G A 492 19.147 162.988 57.917 1.00 44.49 N
ATOM 23 N3 G A 492 17.664 164.462 58.857 1.00 46.07 N
ATOM 24 C4 G A 492 17.006 164.738 60.002 1.00 47.53 C
ATOM 25 P C A 493 11.955 164.479 57.242 1.00 52.93 P
ATOM 26 OP1 C A 493 10.849 164.632 56.263 1.00 54.46 O
ATOM 27 OP2 C A 493 11.697 163.808 58.542 1.00 53.55 O
ATOM 28 O5' C A 493 13.142 163.713 56.506 1.00 51.57 O
TER
ATOM 1 O3' A B 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 2 P G B 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 3 OP1 G B 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 4 OP2 G B 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 5 O5' G B 500 24.138 154.750 62.215 1.00 45.29 O
ATOM 6 C5' G B 500 25.266 154.545 61.357 1.00 48.01 C
ATOM 7 C4' G B 500 26.085 155.808 61.271 1.00 49.60 C
ATOM 8 O4' G B 500 25.314 156.829 60.581 1.00 49.18 O
ATOM 9 C3' G B 500 26.486 156.414 62.614 1.00 50.51 C
ATOM 10 O3' G B 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 11 C2' G B 500 25.381 157.437 62.849 1.00 51.07 C
ATOM 12 O2' G B 500 25.751 158.487 63.721 1.00 50.39 O
ATOM 13 C1' G B 500 25.163 157.952 61.426 1.00 51.09 C
ATOM 14 N9 G B 500 23.861 158.564 61.169 1.00 52.07 N
ATOM 15 C8 G B 500 22.776 158.617 62.012 1.00 52.01 C
ATOM 16 N7 G B 500 21.769 159.277 61.509 1.00 52.95 N
ATOM 17 C5 G B 500 22.211 159.677 60.255 1.00 52.37 C
ATOM 18 C6 G B 500 21.557 160.431 59.251 1.00 52.51 C
ATOM 19 O6 G B 500 20.430 160.931 59.282 1.00 50.27 O
ATOM 20 N1 G B 500 22.359 160.586 58.124 1.00 52.84 N
ATOM 21 C2 G B 500 23.631 160.086 57.986 1.00 52.55 C
ATOM 22 N2 G B 500 24.244 160.318 56.818 1.00 52.76 N
ATOM 23 N3 G B 500 24.257 159.400 58.924 1.00 52.89 N
ATOM 24 C4 G B 500 23.493 159.232 60.023 1.00 52.08 C
ATOM 25 P A B 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 26 OP1 A B 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 27 OP2 A B 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 28 O5' A B 501 30.096 156.306 62.806 1.00 52.29 O
TER
ATOM 2 P G A 492 11.534 166.718 62.450 1.00 55.53 P
ATOM 3 OP1 G A 492 10.175 166.993 61.914 1.00 57.32 O
ATOM 4 OP2 G A 492 11.779 165.472 63.218 1.00 53.58 O
ATOM 5 O5' G A 492 12.556 166.758 61.233 1.00 51.73 O
ATOM 6 C5' G A 492 12.426 167.735 60.196 1.00 49.26 C
ATOM 7 C4' G A 492 13.483 167.518 59.146 1.00 49.95 C
ATOM 8 O4' G A 492 14.795 167.660 59.758 1.00 51.01 O
ATOM 9 C3' G A 492 13.520 166.127 58.538 1.00 50.56 C
ATOM 10 O3' G A 492 12.549 165.946 57.521 1.00 51.87 O
ATOM 11 C2' G A 492 14.950 166.052 58.023 1.00 51.01 C
ATOM 12 O2' G A 492 15.152 166.777 56.825 1.00 50.56 O
ATOM 13 C1' G A 492 15.701 166.736 59.168 1.00 49.95 C
ATOM 14 N9 G A 492 16.113 165.768 60.187 1.00 49.59 N
ATOM 15 C8 G A 492 15.685 165.678 61.495 1.00 47.90 C
ATOM 16 N7 G A 492 16.219 164.677 62.141 1.00 46.50 N
ATOM 17 C5 G A 492 17.055 164.072 61.208 1.00 46.73 C
ATOM 18 C6 G A 492 17.892 162.933 61.322 1.00 45.20 C
ATOM 19 O6 G A 492 18.074 162.207 62.304 1.00 45.17 O
ATOM 20 N1 G A 492 18.557 162.667 60.130 1.00 44.42 N
ATOM 21 C2 G A 492 18.434 163.401 58.974 1.00 44.84 C
ATOM 22 N2 G A 492 19.147 162.988 57.917 1.00 44.49 N
ATOM 23 N3 G A 492 17.664 164.462 58.857 1.00 46.07 N
ATOM 24 C4 G A 492 17.006 164.738 60.002 1.00 47.53 C
ATOM 25 P C A 493 11.955 164.479 57.242 1.00 52.93 P
ATOM 26 OP1 C A 493 10.849 164.632 56.263 1.00 54.46 O
ATOM 27 OP2 C A 493 11.697 163.808 58.542 1.00 53.55 O
ATOM 28 O5' C A 493 13.142 163.713 56.506 1.00 51.57 O
TER
ATOM 1 O3' A B 499 23.562 152.321 62.329 1.00 47.73 O
ATOM 2 P G B 500 23.694 153.628 63.248 1.00 45.76 P
ATOM 3 OP1 G B 500 24.812 153.395 64.189 1.00 46.37 O
ATOM 4 OP2 G B 500 22.354 153.989 63.783 1.00 44.93 O
ATOM 5 O5' G B 500 24.138 154.750 62.215 1.00 45.29 O
ATOM 6 C5' G B 500 25.266 154.545 61.357 1.00 48.01 C
ATOM 7 C4' G B 500 26.085 155.808 61.271 1.00 49.60 C
ATOM 8 O4' G B 500 25.314 156.829 60.581 1.00 49.18 O
ATOM 9 C3' G B 500 26.486 156.414 62.614 1.00 50.51 C
ATOM 10 O3' G B 500 27.734 157.084 62.464 1.00 52.98 O
ATOM 11 C2' G B 500 25.381 157.437 62.849 1.00 51.07 C
ATOM 12 O2' G B 500 25.751 158.487 63.721 1.00 50.39 O
ATOM 13 C1' G B 500 25.163 157.952 61.426 1.00 51.09 C
ATOM 14 N9 G B 500 23.861 158.564 61.169 1.00 52.07 N
ATOM 15 C8 G B 500 22.776 158.617 62.012 1.00 52.01 C
ATOM 16 N7 G B 500 21.769 159.277 61.509 1.00 52.95 N
ATOM 17 C5 G B 500 22.211 159.677 60.255 1.00 52.37 C
ATOM 18 C6 G B 500 21.557 160.431 59.251 1.00 52.51 C
ATOM 19 O6 G B 500 20.430 160.931 59.282 1.00 50.27 O
ATOM 20 N1 G B 500 22.359 160.586 58.124 1.00 52.84 N
ATOM 21 C2 G B 500 23.631 160.086 57.986 1.00 52.55 C
ATOM 22 N2 G B 500 24.244 160.318 56.818 1.00 52.76 N
ATOM 23 N3 G B 500 24.257 159.400 58.924 1.00 52.89 N
ATOM 24 C4 G B 500 23.493 159.232 60.023 1.00 52.08 C
ATOM 25 P A B 501 28.871 156.942 63.593 1.00 52.54 P
ATOM 26 OP1 A B 501 28.434 155.961 64.624 1.00 53.14 O
ATOM 27 OP2 A B 501 29.242 158.319 63.997 1.00 52.33 O
ATOM 28 O5' A B 501 30.096 156.306 62.806 1.00 52.29 O
TER
Atoms:
OP1: (10.175,166.993,61.914)
OP2: (11.779,165.472,63.218)
C3': (13.520,166.127,58.538)
C1': (15.701,166.736,59.168)
C5': (12.426,167.735,60.196)
O6: (18.074,162.207,62.304)
O4': (14.795,167.660,59.758)
C8: (15.685,165.678,61.495)
C2: (18.434,163.401,58.974)
C6: (17.892,162.933,61.322)
C5: (17.055,164.072,61.208)
C4: (17.006,164.738,60.002)
P: (11.534,166.718,62.450)
C4': (13.483,167.518,59.146)
C2': (14.950,166.052,58.023)
O2': (15.152,166.777,56.825)
N1: (18.557,162.667,60.130)
N2: (19.147,162.988,57.917)
N3: (17.664,164.462,58.857)
N7: (16.219,164.677,62.141)
N9: (16.113,165.768,60.187)
O5': (12.556,166.758,61.233)
O3': (12.549,165.946,57.521)
OP2: (11.779,165.472,63.218)
C3': (13.520,166.127,58.538)
C1': (15.701,166.736,59.168)
C5': (12.426,167.735,60.196)
O6: (18.074,162.207,62.304)
O4': (14.795,167.660,59.758)
C8: (15.685,165.678,61.495)
C2: (18.434,163.401,58.974)
C6: (17.892,162.933,61.322)
C5: (17.055,164.072,61.208)
C4: (17.006,164.738,60.002)
P: (11.534,166.718,62.450)
C4': (13.483,167.518,59.146)
C2': (14.950,166.052,58.023)
O2': (15.152,166.777,56.825)
N1: (18.557,162.667,60.130)
N2: (19.147,162.988,57.917)
N3: (17.664,164.462,58.857)
N7: (16.219,164.677,62.141)
N9: (16.113,165.768,60.187)
O5': (12.556,166.758,61.233)
O3': (12.549,165.946,57.521)
OP1: (24.812,153.395,64.189)
OP2: (22.354,153.989,63.783)
C3': (26.486,156.414,62.614)
C1': (25.163,157.952,61.426)
C5': (25.266,154.545,61.357)
O6: (20.430,160.931,59.282)
O4': (25.314,156.829,60.581)
C8: (22.776,158.617,62.012)
C2: (23.631,160.086,57.986)
C6: (21.557,160.431,59.251)
C5: (22.211,159.677,60.255)
C4: (23.493,159.232,60.023)
P: (23.694,153.628,63.248)
C4': (26.085,155.808,61.271)
C2': (25.381,157.437,62.849)
O2': (25.751,158.487,63.721)
N1: (22.359,160.586,58.124)
N2: (24.244,160.318,56.818)
N3: (24.257,159.400,58.924)
N7: (21.769,159.277,61.509)
N9: (23.861,158.564,61.169)
O5': (24.138,154.750,62.215)
O3': (27.734,157.084,62.464)
OP2: (22.354,153.989,63.783)
C3': (26.486,156.414,62.614)
C1': (25.163,157.952,61.426)
C5': (25.266,154.545,61.357)
O6: (20.430,160.931,59.282)
O4': (25.314,156.829,60.581)
C8: (22.776,158.617,62.012)
C2: (23.631,160.086,57.986)
C6: (21.557,160.431,59.251)
C5: (22.211,159.677,60.255)
C4: (23.493,159.232,60.023)
P: (23.694,153.628,63.248)
C4': (26.085,155.808,61.271)
C2': (25.381,157.437,62.849)
O2': (25.751,158.487,63.721)
N1: (22.359,160.586,58.124)
N2: (24.244,160.318,56.818)
N3: (24.257,159.400,58.924)
N7: (21.769,159.277,61.509)
N9: (23.861,158.564,61.169)
O5': (24.138,154.750,62.215)
O3': (27.734,157.084,62.464)
Image (generated by PyMOL):