Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A497:A505
Extra
PDB:
ATOM 1 O3' A A 496 -21.963-113.602 23.077 1.00 0.01 O
ATOM 2 P G A 497 -23.090-114.257 23.987 1.00 0.01 P
ATOM 3 OP1 G A 497 -22.684-115.644 24.239 1.00 0.01 O
ATOM 4 OP2 G A 497 -24.381-114.002 23.342 1.00 0.01 O
ATOM 5 O5' G A 497 -23.010-113.412 25.307 1.00 0.01 O
ATOM 6 C5' G A 497 -21.830-113.347 26.046 1.00 0.01 C
ATOM 7 C4' G A 497 -21.787-112.082 26.808 1.00 0.01 C
ATOM 8 O4' G A 497 -22.125-110.995 25.926 1.00 0.01 O
ATOM 9 C3' G A 497 -22.795-111.939 27.923 1.00 0.01 C
ATOM 10 O3' G A 497 -22.416-112.629 29.080 1.00 0.01 O
ATOM 11 C2' G A 497 -22.808-110.446 28.117 1.00 0.01 C
ATOM 12 O2' G A 497 -21.634-110.038 28.804 1.00 0.01 O
ATOM 13 C1' G A 497 -22.700-109.959 26.679 1.00 0.01 C
ATOM 14 N9 G A 497 -23.994-109.611 26.091 1.00 0.01 N
ATOM 15 C8 G A 497 -24.599-110.201 25.014 1.00 0.01 C
ATOM 16 N7 G A 497 -25.714-109.615 24.704 1.00 0.01 N
ATOM 17 C5 G A 497 -25.821-108.572 25.619 1.00 0.01 C
ATOM 18 C6 G A 497 -26.810-107.583 25.799 1.00 0.01 C
ATOM 19 O6 G A 497 -27.842-107.376 25.182 1.00 0.01 O
ATOM 20 N1 G A 497 -26.503-106.752 26.849 1.00 0.01 N
ATOM 21 C2 G A 497 -25.397-106.841 27.631 1.00 0.01 C
ATOM 22 N2 G A 497 -25.296-105.937 28.611 1.00 0.01 N
ATOM 23 N3 G A 497 -24.470-107.747 27.472 1.00 0.01 N
ATOM 24 C4 G A 497 -24.753-108.563 26.467 1.00 0.01 C
ATOM 25 P U A 498 -23.514-113.126 30.124 1.00 0.01 P
ATOM 26 OP1 U A 498 -22.812-113.933 31.135 1.00 0.01 O
ATOM 27 OP2 U A 498 -24.591-113.753 29.346 1.00 0.01 O
ATOM 28 O5' U A 498 -24.026-111.773 30.771 1.00 0.01 O
TER
ATOM 1 O3' A B 504 -36.730-101.639 27.395 1.00 0.01 O
ATOM 2 P G B 505 -35.943-101.545 26.014 1.00 0.01 P
ATOM 3 OP1 G B 505 -36.564-100.443 25.255 1.00 0.01 O
ATOM 4 OP2 G B 505 -35.903-102.899 25.411 1.00 0.01 O
ATOM 5 O5' G B 505 -34.511-101.122 26.483 1.00 0.01 O
ATOM 6 C5' G B 505 -34.371-100.088 27.430 1.00 0.01 C
ATOM 7 C4' G B 505 -33.215 -99.206 27.092 1.00 0.01 C
ATOM 8 O4' G B 505 -31.993 -99.854 27.518 1.00 0.01 O
ATOM 9 C3' G B 505 -33.036 -98.928 25.625 1.00 0.01 C
ATOM 10 O3' G B 505 -32.407 -97.669 25.493 1.00 0.01 O
ATOM 11 C2' G B 505 -32.082-100.034 25.204 1.00 0.01 C
ATOM 12 O2' G B 505 -31.355 -99.768 24.025 1.00 0.01 O
ATOM 13 C1' G B 505 -31.175-100.104 26.414 1.00 0.01 C
ATOM 14 N9 G B 505 -30.542-101.395 26.615 1.00 0.01 N
ATOM 15 C8 G B 505 -30.747-102.525 25.887 1.00 0.01 C
ATOM 16 N7 G B 505 -30.013-103.520 26.294 1.00 0.01 N
ATOM 17 C5 G B 505 -29.298-103.014 27.359 1.00 0.01 C
ATOM 18 C6 G B 505 -28.344-103.639 28.175 1.00 0.01 C
ATOM 19 O6 G B 505 -27.947-104.794 28.111 1.00 0.01 O
ATOM 20 N1 G B 505 -27.853-102.788 29.147 1.00 0.01 N
ATOM 21 C2 G B 505 -28.250-101.489 29.297 1.00 0.01 C
ATOM 22 N2 G B 505 -27.656-100.818 30.294 1.00 0.01 N
ATOM 23 N3 G B 505 -29.143-100.891 28.525 1.00 0.01 N
ATOM 24 C4 G B 505 -29.618-101.707 27.577 1.00 0.01 C
ATOM 25 P A B 506 -32.958 -96.598 24.447 1.00 0.01 P
ATOM 26 OP1 A B 506 -34.397 -96.877 24.251 1.00 0.01 O
ATOM 27 OP2 A B 506 -32.049 -96.645 23.272 1.00 0.01 O
ATOM 28 O5' A B 506 -32.773 -95.223 25.218 1.00 0.01 O
TER
ATOM 2 P G A 497 -23.090-114.257 23.987 1.00 0.01 P
ATOM 3 OP1 G A 497 -22.684-115.644 24.239 1.00 0.01 O
ATOM 4 OP2 G A 497 -24.381-114.002 23.342 1.00 0.01 O
ATOM 5 O5' G A 497 -23.010-113.412 25.307 1.00 0.01 O
ATOM 6 C5' G A 497 -21.830-113.347 26.046 1.00 0.01 C
ATOM 7 C4' G A 497 -21.787-112.082 26.808 1.00 0.01 C
ATOM 8 O4' G A 497 -22.125-110.995 25.926 1.00 0.01 O
ATOM 9 C3' G A 497 -22.795-111.939 27.923 1.00 0.01 C
ATOM 10 O3' G A 497 -22.416-112.629 29.080 1.00 0.01 O
ATOM 11 C2' G A 497 -22.808-110.446 28.117 1.00 0.01 C
ATOM 12 O2' G A 497 -21.634-110.038 28.804 1.00 0.01 O
ATOM 13 C1' G A 497 -22.700-109.959 26.679 1.00 0.01 C
ATOM 14 N9 G A 497 -23.994-109.611 26.091 1.00 0.01 N
ATOM 15 C8 G A 497 -24.599-110.201 25.014 1.00 0.01 C
ATOM 16 N7 G A 497 -25.714-109.615 24.704 1.00 0.01 N
ATOM 17 C5 G A 497 -25.821-108.572 25.619 1.00 0.01 C
ATOM 18 C6 G A 497 -26.810-107.583 25.799 1.00 0.01 C
ATOM 19 O6 G A 497 -27.842-107.376 25.182 1.00 0.01 O
ATOM 20 N1 G A 497 -26.503-106.752 26.849 1.00 0.01 N
ATOM 21 C2 G A 497 -25.397-106.841 27.631 1.00 0.01 C
ATOM 22 N2 G A 497 -25.296-105.937 28.611 1.00 0.01 N
ATOM 23 N3 G A 497 -24.470-107.747 27.472 1.00 0.01 N
ATOM 24 C4 G A 497 -24.753-108.563 26.467 1.00 0.01 C
ATOM 25 P U A 498 -23.514-113.126 30.124 1.00 0.01 P
ATOM 26 OP1 U A 498 -22.812-113.933 31.135 1.00 0.01 O
ATOM 27 OP2 U A 498 -24.591-113.753 29.346 1.00 0.01 O
ATOM 28 O5' U A 498 -24.026-111.773 30.771 1.00 0.01 O
TER
ATOM 1 O3' A B 504 -36.730-101.639 27.395 1.00 0.01 O
ATOM 2 P G B 505 -35.943-101.545 26.014 1.00 0.01 P
ATOM 3 OP1 G B 505 -36.564-100.443 25.255 1.00 0.01 O
ATOM 4 OP2 G B 505 -35.903-102.899 25.411 1.00 0.01 O
ATOM 5 O5' G B 505 -34.511-101.122 26.483 1.00 0.01 O
ATOM 6 C5' G B 505 -34.371-100.088 27.430 1.00 0.01 C
ATOM 7 C4' G B 505 -33.215 -99.206 27.092 1.00 0.01 C
ATOM 8 O4' G B 505 -31.993 -99.854 27.518 1.00 0.01 O
ATOM 9 C3' G B 505 -33.036 -98.928 25.625 1.00 0.01 C
ATOM 10 O3' G B 505 -32.407 -97.669 25.493 1.00 0.01 O
ATOM 11 C2' G B 505 -32.082-100.034 25.204 1.00 0.01 C
ATOM 12 O2' G B 505 -31.355 -99.768 24.025 1.00 0.01 O
ATOM 13 C1' G B 505 -31.175-100.104 26.414 1.00 0.01 C
ATOM 14 N9 G B 505 -30.542-101.395 26.615 1.00 0.01 N
ATOM 15 C8 G B 505 -30.747-102.525 25.887 1.00 0.01 C
ATOM 16 N7 G B 505 -30.013-103.520 26.294 1.00 0.01 N
ATOM 17 C5 G B 505 -29.298-103.014 27.359 1.00 0.01 C
ATOM 18 C6 G B 505 -28.344-103.639 28.175 1.00 0.01 C
ATOM 19 O6 G B 505 -27.947-104.794 28.111 1.00 0.01 O
ATOM 20 N1 G B 505 -27.853-102.788 29.147 1.00 0.01 N
ATOM 21 C2 G B 505 -28.250-101.489 29.297 1.00 0.01 C
ATOM 22 N2 G B 505 -27.656-100.818 30.294 1.00 0.01 N
ATOM 23 N3 G B 505 -29.143-100.891 28.525 1.00 0.01 N
ATOM 24 C4 G B 505 -29.618-101.707 27.577 1.00 0.01 C
ATOM 25 P A B 506 -32.958 -96.598 24.447 1.00 0.01 P
ATOM 26 OP1 A B 506 -34.397 -96.877 24.251 1.00 0.01 O
ATOM 27 OP2 A B 506 -32.049 -96.645 23.272 1.00 0.01 O
ATOM 28 O5' A B 506 -32.773 -95.223 25.218 1.00 0.01 O
TER
Atoms:
OP1: (-22.684,-115.644,24.239)
OP2: (-24.381,-114.002,23.342)
C3': (-22.795,-111.939,27.923)
C1': (-22.700,-109.959,26.679)
C5': (-21.830,-113.347,26.046)
O6: (-27.842,-107.376,25.182)
O4': (-22.125,-110.995,25.926)
C8: (-24.599,-110.201,25.014)
C2: (-25.397,-106.841,27.631)
C6: (-26.810,-107.583,25.799)
C5: (-25.821,-108.572,25.619)
C4: (-24.753,-108.563,26.467)
P: (-23.090,-114.257,23.987)
C4': (-21.787,-112.082,26.808)
C2': (-22.808,-110.446,28.117)
O2': (-21.634,-110.038,28.804)
N1: (-26.503,-106.752,26.849)
N2: (-25.296,-105.937,28.611)
N3: (-24.470,-107.747,27.472)
N7: (-25.714,-109.615,24.704)
N9: (-23.994,-109.611,26.091)
O5': (-23.010,-113.412,25.307)
O3': (-22.416,-112.629,29.080)
OP2: (-24.381,-114.002,23.342)
C3': (-22.795,-111.939,27.923)
C1': (-22.700,-109.959,26.679)
C5': (-21.830,-113.347,26.046)
O6: (-27.842,-107.376,25.182)
O4': (-22.125,-110.995,25.926)
C8: (-24.599,-110.201,25.014)
C2: (-25.397,-106.841,27.631)
C6: (-26.810,-107.583,25.799)
C5: (-25.821,-108.572,25.619)
C4: (-24.753,-108.563,26.467)
P: (-23.090,-114.257,23.987)
C4': (-21.787,-112.082,26.808)
C2': (-22.808,-110.446,28.117)
O2': (-21.634,-110.038,28.804)
N1: (-26.503,-106.752,26.849)
N2: (-25.296,-105.937,28.611)
N3: (-24.470,-107.747,27.472)
N7: (-25.714,-109.615,24.704)
N9: (-23.994,-109.611,26.091)
O5': (-23.010,-113.412,25.307)
O3': (-22.416,-112.629,29.080)
OP1: (-36.564,-100.443,25.255)
OP2: (-35.903,-102.899,25.411)
C3': (-33.036,-98.928,25.625)
C1': (-31.175,-100.104,26.414)
C5': (-34.371,-100.088,27.430)
O6: (-27.947,-104.794,28.111)
O4': (-31.993,-99.854,27.518)
C8: (-30.747,-102.525,25.887)
C2: (-28.250,-101.489,29.297)
C6: (-28.344,-103.639,28.175)
C5: (-29.298,-103.014,27.359)
C4: (-29.618,-101.707,27.577)
P: (-35.943,-101.545,26.014)
C4': (-33.215,-99.206,27.092)
C2': (-32.082,-100.034,25.204)
O2': (-31.355,-99.768,24.025)
N1: (-27.853,-102.788,29.147)
N2: (-27.656,-100.818,30.294)
N3: (-29.143,-100.891,28.525)
N7: (-30.013,-103.520,26.294)
N9: (-30.542,-101.395,26.615)
O5': (-34.511,-101.122,26.483)
O3': (-32.407,-97.669,25.493)
OP2: (-35.903,-102.899,25.411)
C3': (-33.036,-98.928,25.625)
C1': (-31.175,-100.104,26.414)
C5': (-34.371,-100.088,27.430)
O6: (-27.947,-104.794,28.111)
O4': (-31.993,-99.854,27.518)
C8: (-30.747,-102.525,25.887)
C2: (-28.250,-101.489,29.297)
C6: (-28.344,-103.639,28.175)
C5: (-29.298,-103.014,27.359)
C4: (-29.618,-101.707,27.577)
P: (-35.943,-101.545,26.014)
C4': (-33.215,-99.206,27.092)
C2': (-32.082,-100.034,25.204)
O2': (-31.355,-99.768,24.025)
N1: (-27.853,-102.788,29.147)
N2: (-27.656,-100.818,30.294)
N3: (-29.143,-100.891,28.525)
N7: (-30.013,-103.520,26.294)
N9: (-30.542,-101.395,26.615)
O5': (-34.511,-101.122,26.483)
O3': (-32.407,-97.669,25.493)
Image (generated by PyMOL):