ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHC:A129:A213

Extra

PDB:
ATOM 1 O3' G A 128 21.374 16.344 89.689 1.00140.27 O
ATOM 2 P A A 129 20.874 15.189 90.686 1.00164.69 P
ATOM 3 OP1 A A 129 20.126 15.848 91.778 1.00146.44 O
ATOM 4 OP2 A A 129 22.061 14.366 91.031 1.00134.81 O
ATOM 5 O5' A A 129 19.873 14.347 89.775 1.00169.09 O
ATOM 6 C5' A A 129 18.743 14.965 89.166 1.00169.09 C
ATOM 7 C4' A A 129 18.018 14.016 88.240 1.00169.39 C
ATOM 8 O4' A A 129 18.854 13.716 87.085 1.00168.53 O
ATOM 9 C3' A A 129 17.689 12.643 88.810 1.00172.75 C
ATOM 10 O3' A A 129 16.548 12.635 89.648 1.00174.79 O
ATOM 11 C2' A A 129 17.539 11.798 87.553 1.00169.36 C
ATOM 12 O2' A A 129 16.305 12.073 86.904 1.00169.05 O
ATOM 13 C1' A A 129 18.671 12.363 86.698 1.00164.60 C
ATOM 14 N9 A A 129 19.941 11.631 86.917 1.00130.77 N
ATOM 15 C8 A A 129 21.097 12.088 87.512 1.00125.06 C
ATOM 16 N7 A A 129 22.067 11.204 87.576 1.00118.43 N
ATOM 17 C5 A A 129 21.519 10.078 86.983 1.00120.66 C
ATOM 18 C6 A A 129 22.046 8.796 86.743 1.00117.79 C
ATOM 19 N6 A A 129 23.287 8.425 87.084 1.00116.40 N
ATOM 20 N1 A A 129 21.236 7.901 86.131 1.00118.95 N
ATOM 21 C2 A A 129 19.990 8.275 85.795 1.00121.46 C
ATOM 22 N3 A A 129 19.382 9.449 85.967 1.00123.00 N
ATOM 23 C4 A A 129 20.211 10.322 86.573 1.00126.20 C
ATOM 24 P A A 130 16.469 11.609 90.887 1.00181.48 P
ATOM 25 OP1 A A 130 15.191 11.871 91.591 1.00167.14 O
ATOM 26 OP2 A A 130 17.742 11.738 91.645 1.00161.96 O
ATOM 27 O5' A A 130 16.410 10.187 90.168 1.00182.01 O
TER

ATOM 1 O3' U B 212 24.186 -1.067 83.044 1.00125.00 O
ATOM 2 P U B 213 25.051 -0.334 81.917 1.00155.38 P
ATOM 3 OP1 U B 213 25.441 -1.367 80.930 1.00165.71 O
ATOM 4 OP2 U B 213 26.115 0.426 82.613 1.00155.63 O
ATOM 5 O5' U B 213 24.003 0.670 81.267 1.00130.11 O
ATOM 6 C5' U B 213 22.752 0.199 80.796 1.00133.99 C
ATOM 7 C4' U B 213 21.642 1.166 81.113 1.00136.59 C
ATOM 8 O4' U B 213 21.586 1.409 82.544 1.00136.47 O
ATOM 9 C3' U B 213 21.776 2.556 80.513 1.00140.45 C
ATOM 10 O3' U B 213 21.405 2.607 79.141 1.00143.32 O
ATOM 11 C2' U B 213 20.887 3.399 81.428 1.00138.82 C
ATOM 12 O2' U B 213 19.515 3.252 81.078 1.00136.02 O
ATOM 13 C1' U B 213 21.117 2.724 82.787 1.00134.19 C
ATOM 14 N1 U B 213 22.115 3.452 83.623 1.00127.68 N
ATOM 15 C2 U B 213 21.743 4.672 84.168 1.00126.22 C
ATOM 16 O2 U B 213 20.647 5.172 83.978 1.00129.93 O
ATOM 17 N3 U B 213 22.698 5.300 84.939 1.00123.26 N
ATOM 18 C4 U B 213 23.970 4.847 85.232 1.00123.44 C
ATOM 19 O4 U B 213 24.718 5.530 85.946 1.00121.58 O
ATOM 20 C5 U B 213 24.278 3.577 84.639 1.00125.73 C
ATOM 21 C6 U B 213 23.369 2.942 83.881 1.00127.11 C
ATOM 22 P C B 214 22.356 3.339 78.070 1.00144.41 P
ATOM 23 OP1 C B 214 22.056 2.752 76.742 1.00132.94 O
ATOM 24 OP2 C B 214 23.741 3.256 78.594 1.00129.02 O
ATOM 25 O5' C B 214 21.844 4.843 78.119 1.00143.87 O
TER

Atoms:
OP1: (20.126,15.848,91.778)
OP2: (22.061,14.366,91.031)
C3': (17.689,12.643,88.810)
C1': (18.671,12.363,86.698)
C5': (18.743,14.965,89.166)
O4': (18.854,13.716,87.085)
C8: (21.097,12.088,87.512)
O2': (16.305,12.073,86.904)
C6: (22.046,8.796,86.743)
C5: (21.519,10.078,86.983)
C4: (20.211,10.322,86.573)
P: (20.874,15.189,90.686)
C4': (18.018,14.016,88.240)
C2': (17.539,11.798,87.553)
C2: (19.990,8.275,85.795)
N1: (21.236,7.901,86.131)
N3: (19.382,9.449,85.967)
N6: (23.287,8.425,87.084)
N7: (22.067,11.204,87.576)
N9: (19.941,11.631,86.917)
O5': (19.873,14.347,89.775)
O3': (16.548,12.635,89.648)
C4: (23.970,4.847,85.232)
N3: (22.698,5.300,84.939)
OP1: (25.441,-1.367,80.930)
OP2: (26.115,0.426,82.613)
C2: (21.743,4.672,84.168)
C1': (21.117,2.724,82.787)
C3': (21.776,2.556,80.513)
O5': (24.003,0.670,81.267)
O4': (21.586,1.409,82.544)
C5': (22.752,0.199,80.796)
P: (25.051,-0.334,81.917)
C4': (21.642,1.166,81.113)
C2': (20.887,3.399,81.428)
O2': (19.515,3.252,81.078)
N1: (22.115,3.452,83.623)
O4: (24.718,5.530,85.946)
O2: (20.647,5.172,83.978)
C6: (23.369,2.942,83.881)
C5: (24.278,3.577,84.639)
O3': (21.405,2.607,79.141)
Image (generated by PyMOL):
PyMOL image
show in jmol