Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1140:A1008
Extra
PDB:
ATOM 1 O3' C A1139 -117.712 -93.686 -17.428 1.00 0.01 O
ATOM 2 P A A1140 -117.528 -94.654 -16.173 1.00 0.01 P
ATOM 3 OP1 A A1140 -118.124 -93.949 -15.007 1.00 0.01 O
ATOM 4 OP2 A A1140 -116.109 -95.059 -16.119 1.00 0.01 O
ATOM 5 O5' A A1140 -118.410 -95.908 -16.581 1.00 0.01 O
ATOM 6 C5' A A1140 -119.762 -95.734 -16.964 1.00 0.01 C
ATOM 7 C4' A A1140 -120.322 -96.971 -17.597 1.00 0.01 C
ATOM 8 O4' A A1140 -119.707 -97.180 -18.879 1.00 0.01 O
ATOM 9 C3' A A1140 -120.058 -98.275 -16.883 1.00 0.01 C
ATOM 10 O3' A A1140 -120.852 -98.455 -15.725 1.00 0.01 O
ATOM 11 C2' A A1140 -120.331 -99.268 -17.996 1.00 0.01 C
ATOM 12 O2' A A1140 -121.723 -99.358 -18.279 1.00 0.01 O
ATOM 13 C1' A A1140 -119.652 -98.555 -19.152 1.00 0.01 C
ATOM 14 N9 A A1140 -118.249 -98.943 -19.253 1.00 0.01 N
ATOM 15 C8 A A1140 -117.103 -98.322 -18.833 1.00 0.01 C
ATOM 16 N7 A A1140 -116.014 -99.016 -19.092 1.00 0.01 N
ATOM 17 C5 A A1140 -116.503-100.158 -19.708 1.00 0.01 C
ATOM 18 C6 A A1140 -115.906-101.296 -20.224 1.00 0.01 C
ATOM 19 N6 A A1140 -114.598-101.516 -20.228 1.00 0.01 N
ATOM 20 N1 A A1140 -116.698-102.227 -20.753 1.00 0.01 N
ATOM 21 C2 A A1140 -117.994-102.023 -20.770 1.00 0.01 C
ATOM 22 N3 A A1140 -118.691-101.012 -20.324 1.00 0.01 N
ATOM 23 C4 A A1140 -117.868-100.120 -19.804 1.00 0.01 C
ATOM 24 P U A1141 -120.221 -99.092 -14.395 1.00 0.01 P
ATOM 25 OP1 U A1141 -120.983 -98.568 -13.279 1.00 0.01 O
ATOM 26 OP2 U A1141 -118.783 -98.868 -14.409 1.00 0.01 O
ATOM 27 O5' U A1141 -120.504-100.633 -14.592 1.00 0.01 O
TER
ATOM 1 O3' A B1007 -113.794-111.335 -24.811 1.00 0.01 O
ATOM 2 P U B1008 -114.347-110.401 -25.968 1.00 0.01 P
ATOM 3 OP1 U B1008 -114.789-111.283 -27.037 1.00 0.01 O
ATOM 4 OP2 U B1008 -113.322-109.385 -26.266 1.00 0.01 O
ATOM 5 O5' U B1008 -115.591-109.720 -25.295 1.00 0.01 O
ATOM 6 C5' U B1008 -116.839-110.333 -25.348 1.00 0.01 C
ATOM 7 C4' U B1008 -117.869-109.451 -24.764 1.00 0.01 C
ATOM 8 O4' U B1008 -117.459-109.026 -23.448 1.00 0.01 O
ATOM 9 C3' U B1008 -118.076-108.154 -25.479 1.00 0.01 C
ATOM 10 O3' U B1008 -118.798-108.284 -26.667 1.00 0.01 O
ATOM 11 C2' U B1008 -118.760-107.314 -24.427 1.00 0.01 C
ATOM 12 O2' U B1008 -120.119-107.693 -24.286 1.00 0.01 O
ATOM 13 C1' U B1008 -117.987-107.747 -23.188 1.00 0.01 C
ATOM 14 N1 U B1008 -116.892-106.857 -22.929 1.00 0.01 N
ATOM 15 C2 U B1008 -117.192-105.696 -22.278 1.00 0.01 C
ATOM 16 O2 U B1008 -118.291-105.412 -21.905 1.00 0.01 O
ATOM 17 N3 U B1008 -116.170-104.863 -22.049 1.00 0.01 N
ATOM 18 C4 U B1008 -114.895-105.084 -22.441 1.00 0.01 C
ATOM 19 O4 U B1008 -114.089-104.216 -22.165 1.00 0.01 O
ATOM 20 C5 U B1008 -114.634-106.315 -23.137 1.00 0.01 C
ATOM 21 C6 U B1008 -115.643-107.155 -23.365 1.00 0.01 C
ATOM 22 P G B1009 -118.470-107.289 -27.860 1.00 0.01 P
ATOM 23 OP1 G B1009 -119.039-107.874 -29.098 1.00 0.01 O
ATOM 24 OP2 G B1009 -117.023-107.035 -27.815 1.00 0.01 O
ATOM 25 O5' G B1009 -119.264-105.987 -27.435 1.00 0.01 O
TER
ATOM 2 P A A1140 -117.528 -94.654 -16.173 1.00 0.01 P
ATOM 3 OP1 A A1140 -118.124 -93.949 -15.007 1.00 0.01 O
ATOM 4 OP2 A A1140 -116.109 -95.059 -16.119 1.00 0.01 O
ATOM 5 O5' A A1140 -118.410 -95.908 -16.581 1.00 0.01 O
ATOM 6 C5' A A1140 -119.762 -95.734 -16.964 1.00 0.01 C
ATOM 7 C4' A A1140 -120.322 -96.971 -17.597 1.00 0.01 C
ATOM 8 O4' A A1140 -119.707 -97.180 -18.879 1.00 0.01 O
ATOM 9 C3' A A1140 -120.058 -98.275 -16.883 1.00 0.01 C
ATOM 10 O3' A A1140 -120.852 -98.455 -15.725 1.00 0.01 O
ATOM 11 C2' A A1140 -120.331 -99.268 -17.996 1.00 0.01 C
ATOM 12 O2' A A1140 -121.723 -99.358 -18.279 1.00 0.01 O
ATOM 13 C1' A A1140 -119.652 -98.555 -19.152 1.00 0.01 C
ATOM 14 N9 A A1140 -118.249 -98.943 -19.253 1.00 0.01 N
ATOM 15 C8 A A1140 -117.103 -98.322 -18.833 1.00 0.01 C
ATOM 16 N7 A A1140 -116.014 -99.016 -19.092 1.00 0.01 N
ATOM 17 C5 A A1140 -116.503-100.158 -19.708 1.00 0.01 C
ATOM 18 C6 A A1140 -115.906-101.296 -20.224 1.00 0.01 C
ATOM 19 N6 A A1140 -114.598-101.516 -20.228 1.00 0.01 N
ATOM 20 N1 A A1140 -116.698-102.227 -20.753 1.00 0.01 N
ATOM 21 C2 A A1140 -117.994-102.023 -20.770 1.00 0.01 C
ATOM 22 N3 A A1140 -118.691-101.012 -20.324 1.00 0.01 N
ATOM 23 C4 A A1140 -117.868-100.120 -19.804 1.00 0.01 C
ATOM 24 P U A1141 -120.221 -99.092 -14.395 1.00 0.01 P
ATOM 25 OP1 U A1141 -120.983 -98.568 -13.279 1.00 0.01 O
ATOM 26 OP2 U A1141 -118.783 -98.868 -14.409 1.00 0.01 O
ATOM 27 O5' U A1141 -120.504-100.633 -14.592 1.00 0.01 O
TER
ATOM 1 O3' A B1007 -113.794-111.335 -24.811 1.00 0.01 O
ATOM 2 P U B1008 -114.347-110.401 -25.968 1.00 0.01 P
ATOM 3 OP1 U B1008 -114.789-111.283 -27.037 1.00 0.01 O
ATOM 4 OP2 U B1008 -113.322-109.385 -26.266 1.00 0.01 O
ATOM 5 O5' U B1008 -115.591-109.720 -25.295 1.00 0.01 O
ATOM 6 C5' U B1008 -116.839-110.333 -25.348 1.00 0.01 C
ATOM 7 C4' U B1008 -117.869-109.451 -24.764 1.00 0.01 C
ATOM 8 O4' U B1008 -117.459-109.026 -23.448 1.00 0.01 O
ATOM 9 C3' U B1008 -118.076-108.154 -25.479 1.00 0.01 C
ATOM 10 O3' U B1008 -118.798-108.284 -26.667 1.00 0.01 O
ATOM 11 C2' U B1008 -118.760-107.314 -24.427 1.00 0.01 C
ATOM 12 O2' U B1008 -120.119-107.693 -24.286 1.00 0.01 O
ATOM 13 C1' U B1008 -117.987-107.747 -23.188 1.00 0.01 C
ATOM 14 N1 U B1008 -116.892-106.857 -22.929 1.00 0.01 N
ATOM 15 C2 U B1008 -117.192-105.696 -22.278 1.00 0.01 C
ATOM 16 O2 U B1008 -118.291-105.412 -21.905 1.00 0.01 O
ATOM 17 N3 U B1008 -116.170-104.863 -22.049 1.00 0.01 N
ATOM 18 C4 U B1008 -114.895-105.084 -22.441 1.00 0.01 C
ATOM 19 O4 U B1008 -114.089-104.216 -22.165 1.00 0.01 O
ATOM 20 C5 U B1008 -114.634-106.315 -23.137 1.00 0.01 C
ATOM 21 C6 U B1008 -115.643-107.155 -23.365 1.00 0.01 C
ATOM 22 P G B1009 -118.470-107.289 -27.860 1.00 0.01 P
ATOM 23 OP1 G B1009 -119.039-107.874 -29.098 1.00 0.01 O
ATOM 24 OP2 G B1009 -117.023-107.035 -27.815 1.00 0.01 O
ATOM 25 O5' G B1009 -119.264-105.987 -27.435 1.00 0.01 O
TER
Atoms:
OP1: (-118.124,-93.949,-15.007)
OP2: (-116.109,-95.059,-16.119)
C3': (-120.058,-98.275,-16.883)
C1': (-119.652,-98.555,-19.152)
C5': (-119.762,-95.734,-16.964)
O4': (-119.707,-97.180,-18.879)
C8: (-117.103,-98.322,-18.833)
O2': (-121.723,-99.358,-18.279)
C6: (-115.906,-101.296,-20.224)
C5: (-116.503,-100.158,-19.708)
C4: (-117.868,-100.120,-19.804)
P: (-117.528,-94.654,-16.173)
C4': (-120.322,-96.971,-17.597)
C2': (-120.331,-99.268,-17.996)
C2: (-117.994,-102.023,-20.770)
N1: (-116.698,-102.227,-20.753)
N3: (-118.691,-101.012,-20.324)
N6: (-114.598,-101.516,-20.228)
N7: (-116.014,-99.016,-19.092)
N9: (-118.249,-98.943,-19.253)
O5': (-118.410,-95.908,-16.581)
O3': (-120.852,-98.455,-15.725)
OP2: (-116.109,-95.059,-16.119)
C3': (-120.058,-98.275,-16.883)
C1': (-119.652,-98.555,-19.152)
C5': (-119.762,-95.734,-16.964)
O4': (-119.707,-97.180,-18.879)
C8: (-117.103,-98.322,-18.833)
O2': (-121.723,-99.358,-18.279)
C6: (-115.906,-101.296,-20.224)
C5: (-116.503,-100.158,-19.708)
C4: (-117.868,-100.120,-19.804)
P: (-117.528,-94.654,-16.173)
C4': (-120.322,-96.971,-17.597)
C2': (-120.331,-99.268,-17.996)
C2: (-117.994,-102.023,-20.770)
N1: (-116.698,-102.227,-20.753)
N3: (-118.691,-101.012,-20.324)
N6: (-114.598,-101.516,-20.228)
N7: (-116.014,-99.016,-19.092)
N9: (-118.249,-98.943,-19.253)
O5': (-118.410,-95.908,-16.581)
O3': (-120.852,-98.455,-15.725)
C4: (-114.895,-105.084,-22.441)
N3: (-116.170,-104.863,-22.049)
OP1: (-114.789,-111.283,-27.037)
OP2: (-113.322,-109.385,-26.266)
C2: (-117.192,-105.696,-22.278)
C1': (-117.987,-107.747,-23.188)
C3': (-118.076,-108.154,-25.479)
O5': (-115.591,-109.720,-25.295)
O4': (-117.459,-109.026,-23.448)
C5': (-116.839,-110.333,-25.348)
P: (-114.347,-110.401,-25.968)
C4': (-117.869,-109.451,-24.764)
C2': (-118.760,-107.314,-24.427)
O2': (-120.119,-107.693,-24.286)
N1: (-116.892,-106.857,-22.929)
O4: (-114.089,-104.216,-22.165)
O2: (-118.291,-105.412,-21.905)
C6: (-115.643,-107.155,-23.365)
C5: (-114.634,-106.315,-23.137)
O3': (-118.798,-108.284,-26.667)
N3: (-116.170,-104.863,-22.049)
OP1: (-114.789,-111.283,-27.037)
OP2: (-113.322,-109.385,-26.266)
C2: (-117.192,-105.696,-22.278)
C1': (-117.987,-107.747,-23.188)
C3': (-118.076,-108.154,-25.479)
O5': (-115.591,-109.720,-25.295)
O4': (-117.459,-109.026,-23.448)
C5': (-116.839,-110.333,-25.348)
P: (-114.347,-110.401,-25.968)
C4': (-117.869,-109.451,-24.764)
C2': (-118.760,-107.314,-24.427)
O2': (-120.119,-107.693,-24.286)
N1: (-116.892,-106.857,-22.929)
O4: (-114.089,-104.216,-22.165)
O2: (-118.291,-105.412,-21.905)
C6: (-115.643,-107.155,-23.365)
C5: (-114.634,-106.315,-23.137)
O3': (-118.798,-108.284,-26.667)
Image (generated by PyMOL):