Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2F8K:B13:B3
Extra
PDB:
ATOM 1 O3' G A 12 2.141 -0.473 -37.129 1.00 27.05 O
ATOM 2 P A A 13 1.891 0.804 -38.034 1.00 27.55 P
ATOM 3 OP1 A A 13 1.920 0.398 -39.455 1.00 26.75 O
ATOM 4 OP2 A A 13 2.796 1.866 -37.550 1.00 26.78 O
ATOM 5 O5' A A 13 0.381 1.189 -37.678 1.00 26.94 O
ATOM 6 C5' A A 13 -0.691 0.312 -38.002 1.00 27.12 C
ATOM 7 C4' A A 13 -1.978 0.835 -37.382 1.00 27.73 C
ATOM 8 O4' A A 13 -1.832 0.994 -35.951 1.00 26.93 O
ATOM 9 C3' A A 13 -2.390 2.231 -37.818 1.00 27.39 C
ATOM 10 O3' A A 13 -2.902 2.224 -39.147 1.00 27.77 O
ATOM 11 C2' A A 13 -3.407 2.588 -36.739 1.00 27.19 C
ATOM 12 O2' A A 13 -4.666 1.972 -36.916 1.00 27.28 O
ATOM 13 C1' A A 13 -2.694 2.036 -35.514 1.00 27.30 C
ATOM 14 N9 A A 13 -1.857 3.023 -34.837 1.00 27.85 N
ATOM 15 C8 A A 13 -0.492 3.186 -34.960 1.00 28.05 C
ATOM 16 N7 A A 13 0.006 4.154 -34.220 1.00 28.03 N
ATOM 17 C5 A A 13 -1.110 4.661 -33.567 1.00 27.45 C
ATOM 18 C6 A A 13 -1.273 5.708 -32.637 1.00 27.31 C
ATOM 19 N6 A A 13 -0.272 6.459 -32.174 1.00 27.20 N
ATOM 20 N1 A A 13 -2.522 5.954 -32.192 1.00 27.66 N
ATOM 21 C2 A A 13 -3.542 5.210 -32.638 1.00 27.69 C
ATOM 22 N3 A A 13 -3.520 4.199 -33.505 1.00 27.67 N
ATOM 23 C4 A A 13 -2.263 3.976 -33.934 1.00 27.82 C
ATOM 24 P U A 14 -2.731 3.511 -40.079 1.00 27.23 P
ATOM 25 OP1 U A 14 -3.210 3.149 -41.425 1.00 26.75 O
ATOM 26 OP2 U A 14 -1.375 4.085 -39.923 1.00 26.74 O
ATOM 27 O5' U A 14 -3.756 4.514 -39.369 1.00 28.22 O
TER
ATOM 1 O3' A B 2 -4.962 13.332 -25.939 1.00 25.88 O
ATOM 2 P U B 3 -5.099 12.010 -25.054 1.00 25.16 P
ATOM 3 OP1 U B 3 -5.933 12.375 -23.895 1.00 24.27 O
ATOM 4 OP2 U B 3 -3.775 11.385 -24.841 1.00 25.66 O
ATOM 5 O5' U B 3 -5.891 11.022 -26.024 1.00 25.59 O
ATOM 6 C5' U B 3 -7.249 11.272 -26.375 1.00 24.99 C
ATOM 7 C4' U B 3 -7.689 10.249 -27.396 1.00 24.41 C
ATOM 8 O4' U B 3 -6.889 10.460 -28.580 1.00 24.49 O
ATOM 9 C3' U B 3 -7.389 8.795 -27.061 1.00 24.40 C
ATOM 10 O3' U B 3 -8.365 8.260 -26.233 1.00 24.65 O
ATOM 11 C2' U B 3 -7.481 8.187 -28.446 1.00 24.90 C
ATOM 12 O2' U B 3 -8.804 8.138 -28.942 1.00 26.22 O
ATOM 13 C1' U B 3 -6.695 9.216 -29.239 1.00 23.51 C
ATOM 14 N1 U B 3 -5.230 8.908 -29.361 1.00 23.22 N
ATOM 15 C2 U B 3 -4.820 8.116 -30.404 1.00 23.18 C
ATOM 16 O2 U B 3 -5.600 7.642 -31.212 1.00 23.21 O
ATOM 17 N3 U B 3 -3.461 7.892 -30.461 1.00 23.02 N
ATOM 18 C4 U B 3 -2.494 8.360 -29.586 1.00 23.55 C
ATOM 19 O4 U B 3 -1.309 8.072 -29.752 1.00 23.54 O
ATOM 20 C5 U B 3 -3.003 9.182 -28.521 1.00 23.53 C
ATOM 21 C6 U B 3 -4.318 9.416 -28.455 1.00 23.19 C
ATOM 22 P C B 4 -8.032 7.037 -25.269 1.00 26.57 P
ATOM 23 OP1 C B 4 -9.236 6.887 -24.433 1.00 27.08 O
ATOM 24 OP2 C B 4 -6.702 7.223 -24.625 1.00 25.89 O
ATOM 25 O5' C B 4 -7.952 5.775 -26.258 1.00 25.83 O
TER
ATOM 2 P A A 13 1.891 0.804 -38.034 1.00 27.55 P
ATOM 3 OP1 A A 13 1.920 0.398 -39.455 1.00 26.75 O
ATOM 4 OP2 A A 13 2.796 1.866 -37.550 1.00 26.78 O
ATOM 5 O5' A A 13 0.381 1.189 -37.678 1.00 26.94 O
ATOM 6 C5' A A 13 -0.691 0.312 -38.002 1.00 27.12 C
ATOM 7 C4' A A 13 -1.978 0.835 -37.382 1.00 27.73 C
ATOM 8 O4' A A 13 -1.832 0.994 -35.951 1.00 26.93 O
ATOM 9 C3' A A 13 -2.390 2.231 -37.818 1.00 27.39 C
ATOM 10 O3' A A 13 -2.902 2.224 -39.147 1.00 27.77 O
ATOM 11 C2' A A 13 -3.407 2.588 -36.739 1.00 27.19 C
ATOM 12 O2' A A 13 -4.666 1.972 -36.916 1.00 27.28 O
ATOM 13 C1' A A 13 -2.694 2.036 -35.514 1.00 27.30 C
ATOM 14 N9 A A 13 -1.857 3.023 -34.837 1.00 27.85 N
ATOM 15 C8 A A 13 -0.492 3.186 -34.960 1.00 28.05 C
ATOM 16 N7 A A 13 0.006 4.154 -34.220 1.00 28.03 N
ATOM 17 C5 A A 13 -1.110 4.661 -33.567 1.00 27.45 C
ATOM 18 C6 A A 13 -1.273 5.708 -32.637 1.00 27.31 C
ATOM 19 N6 A A 13 -0.272 6.459 -32.174 1.00 27.20 N
ATOM 20 N1 A A 13 -2.522 5.954 -32.192 1.00 27.66 N
ATOM 21 C2 A A 13 -3.542 5.210 -32.638 1.00 27.69 C
ATOM 22 N3 A A 13 -3.520 4.199 -33.505 1.00 27.67 N
ATOM 23 C4 A A 13 -2.263 3.976 -33.934 1.00 27.82 C
ATOM 24 P U A 14 -2.731 3.511 -40.079 1.00 27.23 P
ATOM 25 OP1 U A 14 -3.210 3.149 -41.425 1.00 26.75 O
ATOM 26 OP2 U A 14 -1.375 4.085 -39.923 1.00 26.74 O
ATOM 27 O5' U A 14 -3.756 4.514 -39.369 1.00 28.22 O
TER
ATOM 1 O3' A B 2 -4.962 13.332 -25.939 1.00 25.88 O
ATOM 2 P U B 3 -5.099 12.010 -25.054 1.00 25.16 P
ATOM 3 OP1 U B 3 -5.933 12.375 -23.895 1.00 24.27 O
ATOM 4 OP2 U B 3 -3.775 11.385 -24.841 1.00 25.66 O
ATOM 5 O5' U B 3 -5.891 11.022 -26.024 1.00 25.59 O
ATOM 6 C5' U B 3 -7.249 11.272 -26.375 1.00 24.99 C
ATOM 7 C4' U B 3 -7.689 10.249 -27.396 1.00 24.41 C
ATOM 8 O4' U B 3 -6.889 10.460 -28.580 1.00 24.49 O
ATOM 9 C3' U B 3 -7.389 8.795 -27.061 1.00 24.40 C
ATOM 10 O3' U B 3 -8.365 8.260 -26.233 1.00 24.65 O
ATOM 11 C2' U B 3 -7.481 8.187 -28.446 1.00 24.90 C
ATOM 12 O2' U B 3 -8.804 8.138 -28.942 1.00 26.22 O
ATOM 13 C1' U B 3 -6.695 9.216 -29.239 1.00 23.51 C
ATOM 14 N1 U B 3 -5.230 8.908 -29.361 1.00 23.22 N
ATOM 15 C2 U B 3 -4.820 8.116 -30.404 1.00 23.18 C
ATOM 16 O2 U B 3 -5.600 7.642 -31.212 1.00 23.21 O
ATOM 17 N3 U B 3 -3.461 7.892 -30.461 1.00 23.02 N
ATOM 18 C4 U B 3 -2.494 8.360 -29.586 1.00 23.55 C
ATOM 19 O4 U B 3 -1.309 8.072 -29.752 1.00 23.54 O
ATOM 20 C5 U B 3 -3.003 9.182 -28.521 1.00 23.53 C
ATOM 21 C6 U B 3 -4.318 9.416 -28.455 1.00 23.19 C
ATOM 22 P C B 4 -8.032 7.037 -25.269 1.00 26.57 P
ATOM 23 OP1 C B 4 -9.236 6.887 -24.433 1.00 27.08 O
ATOM 24 OP2 C B 4 -6.702 7.223 -24.625 1.00 25.89 O
ATOM 25 O5' C B 4 -7.952 5.775 -26.258 1.00 25.83 O
TER
Atoms:
OP1: (1.920,0.398,-39.455)
OP2: (2.796,1.866,-37.550)
C3': (-2.390,2.231,-37.818)
C1': (-2.694,2.036,-35.514)
C5': (-0.691,0.312,-38.002)
O4': (-1.832,0.994,-35.951)
C8: (-0.492,3.186,-34.960)
O2': (-4.666,1.972,-36.916)
C6: (-1.273,5.708,-32.637)
C5: (-1.110,4.661,-33.567)
C4: (-2.263,3.976,-33.934)
P: (1.891,0.804,-38.034)
C4': (-1.978,0.835,-37.382)
C2': (-3.407,2.588,-36.739)
C2: (-3.542,5.210,-32.638)
N1: (-2.522,5.954,-32.192)
N3: (-3.520,4.199,-33.505)
N6: (-0.272,6.459,-32.174)
N7: (0.006,4.154,-34.220)
N9: (-1.857,3.023,-34.837)
O5': (0.381,1.189,-37.678)
O3': (-2.902,2.224,-39.147)
OP2: (2.796,1.866,-37.550)
C3': (-2.390,2.231,-37.818)
C1': (-2.694,2.036,-35.514)
C5': (-0.691,0.312,-38.002)
O4': (-1.832,0.994,-35.951)
C8: (-0.492,3.186,-34.960)
O2': (-4.666,1.972,-36.916)
C6: (-1.273,5.708,-32.637)
C5: (-1.110,4.661,-33.567)
C4: (-2.263,3.976,-33.934)
P: (1.891,0.804,-38.034)
C4': (-1.978,0.835,-37.382)
C2': (-3.407,2.588,-36.739)
C2: (-3.542,5.210,-32.638)
N1: (-2.522,5.954,-32.192)
N3: (-3.520,4.199,-33.505)
N6: (-0.272,6.459,-32.174)
N7: (0.006,4.154,-34.220)
N9: (-1.857,3.023,-34.837)
O5': (0.381,1.189,-37.678)
O3': (-2.902,2.224,-39.147)
C4: (-2.494,8.360,-29.586)
N3: (-3.461,7.892,-30.461)
OP1: (-5.933,12.375,-23.895)
OP2: (-3.775,11.385,-24.841)
C2: (-4.820,8.116,-30.404)
C1': (-6.695,9.216,-29.239)
C3': (-7.389,8.795,-27.061)
O5': (-5.891,11.022,-26.024)
O4': (-6.889,10.460,-28.580)
C5': (-7.249,11.272,-26.375)
P: (-5.099,12.010,-25.054)
C4': (-7.689,10.249,-27.396)
C2': (-7.481,8.187,-28.446)
O2': (-8.804,8.138,-28.942)
N1: (-5.230,8.908,-29.361)
O4: (-1.309,8.072,-29.752)
O2: (-5.600,7.642,-31.212)
C6: (-4.318,9.416,-28.455)
C5: (-3.003,9.182,-28.521)
O3': (-8.365,8.260,-26.233)
N3: (-3.461,7.892,-30.461)
OP1: (-5.933,12.375,-23.895)
OP2: (-3.775,11.385,-24.841)
C2: (-4.820,8.116,-30.404)
C1': (-6.695,9.216,-29.239)
C3': (-7.389,8.795,-27.061)
O5': (-5.891,11.022,-26.024)
O4': (-6.889,10.460,-28.580)
C5': (-7.249,11.272,-26.375)
P: (-5.099,12.010,-25.054)
C4': (-7.689,10.249,-27.396)
C2': (-7.481,8.187,-28.446)
O2': (-8.804,8.138,-28.942)
N1: (-5.230,8.908,-29.361)
O4: (-1.309,8.072,-29.752)
O2: (-5.600,7.642,-31.212)
C6: (-4.318,9.416,-28.455)
C5: (-3.003,9.182,-28.521)
O3': (-8.365,8.260,-26.233)
Image (generated by PyMOL):