Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:51113:51286
Extra
PDB:
ATOM 1 O3' U A1112 94.825 -1.812 245.979 1.00 40.58 O
ATOM 2 P A A1113 95.202 -0.817 247.160 1.00 35.15 P
ATOM 3 OP1 A A1113 95.786 0.372 246.504 1.00 34.97 O
ATOM 4 OP2 A A1113 96.006 -1.592 248.163 1.00 34.97 O
ATOM 5 O5' A A1113 93.801 -0.469 247.805 1.00 35.48 O
ATOM 6 C5' A A1113 93.593 -0.546 249.199 1.00 35.52 C
ATOM 7 C4' A A1113 92.130 -0.695 249.497 1.00 35.91 C
ATOM 8 O4' A A1113 91.724 -2.044 249.249 1.00 36.10 O
ATOM 9 C3' A A1113 91.706 -0.456 250.928 1.00 36.01 C
ATOM 10 O3' A A1113 91.595 0.915 251.250 1.00 35.97 O
ATOM 11 C2' A A1113 90.395 -1.175 250.997 1.00 36.40 C
ATOM 12 O2' A A1113 89.421 -0.399 250.368 1.00 36.63 O
ATOM 13 C1' A A1113 90.682 -2.397 250.131 1.00 36.39 C
ATOM 14 N9 A A1113 91.113 -3.554 250.955 1.00 36.34 N
ATOM 15 C8 A A1113 92.316 -4.149 251.007 1.00 36.05 C
ATOM 16 N7 A A1113 92.341 -5.103 251.895 1.00 36.11 N
ATOM 17 C5 A A1113 91.102 -5.167 252.471 1.00 36.45 C
ATOM 18 C6 A A1113 90.501 -5.997 253.439 1.00 36.69 C
ATOM 19 N6 A A1113 91.103 -6.977 254.086 1.00 36.61 N
ATOM 20 N1 A A1113 89.215 -5.833 253.772 1.00 37.04 N
ATOM 21 C2 A A1113 88.566 -4.882 253.119 1.00 37.15 C
ATOM 22 N3 A A1113 88.999 -4.059 252.176 1.00 36.96 N
ATOM 23 C4 A A1113 90.325 -4.226 251.890 1.00 36.60 C
ATOM 24 P G A1114 91.812 1.398 252.758 1.00 38.57 P
ATOM 25 OP1 G A1114 91.898 2.905 252.715 1.00 38.50 O
ATOM 26 OP2 G A1114 92.970 0.609 253.303 1.00 38.30 O
ATOM 27 O5' G A1114 90.462 0.931 253.477 1.00 38.97 O
TER
ATOM 1 O3' C B1285 85.403 -12.613 260.375 1.00 40.55 O
ATOM 2 P U B1286 85.218 -12.993 258.827 1.00 42.76 P
ATOM 3 OP1 U B1286 84.158 -14.007 258.779 1.00 43.20 O
ATOM 4 OP2 U B1286 86.538 -13.333 258.255 1.00 42.39 O
ATOM 5 O5' U B1286 84.727 -11.619 258.194 1.00 42.74 O
ATOM 6 C5' U B1286 83.370 -11.283 258.057 1.00 43.12 C
ATOM 7 C4' U B1286 83.216 -10.082 257.172 1.00 43.02 C
ATOM 8 O4' U B1286 84.094 -9.023 257.631 1.00 42.67 O
ATOM 9 C3' U B1286 83.613 -10.266 255.717 1.00 42.88 C
ATOM 10 O3' U B1286 82.621 -10.941 254.964 1.00 43.23 O
ATOM 11 C2' U B1286 83.851 -8.830 255.284 1.00 42.66 C
ATOM 12 O2' U B1286 82.622 -8.161 255.127 1.00 42.98 O
ATOM 13 C1' U B1286 84.543 -8.257 256.522 1.00 42.43 C
ATOM 14 N1 U B1286 86.032 -8.379 256.407 1.00 41.99 N
ATOM 15 C2 U B1286 86.788 -7.454 255.677 1.00 41.67 C
ATOM 16 O2 U B1286 86.298 -6.479 255.163 1.00 41.73 O
ATOM 17 N3 U B1286 88.131 -7.699 255.572 1.00 41.30 N
ATOM 18 C4 U B1286 88.763 -8.797 256.118 1.00 41.23 C
ATOM 19 O4 U B1286 89.965 -8.996 255.992 1.00 40.90 O
ATOM 20 C5 U B1286 87.937 -9.685 256.851 1.00 41.56 C
ATOM 21 C6 U B1286 86.653 -9.465 256.957 1.00 41.92 C
ATOM 22 P A B1287 82.922 -11.600 253.517 1.00 46.72 P
ATOM 23 OP1 A B1287 81.740 -12.370 253.158 1.00 47.17 O
ATOM 24 OP2 A B1287 84.206 -12.300 253.587 1.00 46.40 O
ATOM 25 O5' A B1287 83.050 -10.339 252.562 1.00 46.55 O
TER
ATOM 2 P A A1113 95.202 -0.817 247.160 1.00 35.15 P
ATOM 3 OP1 A A1113 95.786 0.372 246.504 1.00 34.97 O
ATOM 4 OP2 A A1113 96.006 -1.592 248.163 1.00 34.97 O
ATOM 5 O5' A A1113 93.801 -0.469 247.805 1.00 35.48 O
ATOM 6 C5' A A1113 93.593 -0.546 249.199 1.00 35.52 C
ATOM 7 C4' A A1113 92.130 -0.695 249.497 1.00 35.91 C
ATOM 8 O4' A A1113 91.724 -2.044 249.249 1.00 36.10 O
ATOM 9 C3' A A1113 91.706 -0.456 250.928 1.00 36.01 C
ATOM 10 O3' A A1113 91.595 0.915 251.250 1.00 35.97 O
ATOM 11 C2' A A1113 90.395 -1.175 250.997 1.00 36.40 C
ATOM 12 O2' A A1113 89.421 -0.399 250.368 1.00 36.63 O
ATOM 13 C1' A A1113 90.682 -2.397 250.131 1.00 36.39 C
ATOM 14 N9 A A1113 91.113 -3.554 250.955 1.00 36.34 N
ATOM 15 C8 A A1113 92.316 -4.149 251.007 1.00 36.05 C
ATOM 16 N7 A A1113 92.341 -5.103 251.895 1.00 36.11 N
ATOM 17 C5 A A1113 91.102 -5.167 252.471 1.00 36.45 C
ATOM 18 C6 A A1113 90.501 -5.997 253.439 1.00 36.69 C
ATOM 19 N6 A A1113 91.103 -6.977 254.086 1.00 36.61 N
ATOM 20 N1 A A1113 89.215 -5.833 253.772 1.00 37.04 N
ATOM 21 C2 A A1113 88.566 -4.882 253.119 1.00 37.15 C
ATOM 22 N3 A A1113 88.999 -4.059 252.176 1.00 36.96 N
ATOM 23 C4 A A1113 90.325 -4.226 251.890 1.00 36.60 C
ATOM 24 P G A1114 91.812 1.398 252.758 1.00 38.57 P
ATOM 25 OP1 G A1114 91.898 2.905 252.715 1.00 38.50 O
ATOM 26 OP2 G A1114 92.970 0.609 253.303 1.00 38.30 O
ATOM 27 O5' G A1114 90.462 0.931 253.477 1.00 38.97 O
TER
ATOM 1 O3' C B1285 85.403 -12.613 260.375 1.00 40.55 O
ATOM 2 P U B1286 85.218 -12.993 258.827 1.00 42.76 P
ATOM 3 OP1 U B1286 84.158 -14.007 258.779 1.00 43.20 O
ATOM 4 OP2 U B1286 86.538 -13.333 258.255 1.00 42.39 O
ATOM 5 O5' U B1286 84.727 -11.619 258.194 1.00 42.74 O
ATOM 6 C5' U B1286 83.370 -11.283 258.057 1.00 43.12 C
ATOM 7 C4' U B1286 83.216 -10.082 257.172 1.00 43.02 C
ATOM 8 O4' U B1286 84.094 -9.023 257.631 1.00 42.67 O
ATOM 9 C3' U B1286 83.613 -10.266 255.717 1.00 42.88 C
ATOM 10 O3' U B1286 82.621 -10.941 254.964 1.00 43.23 O
ATOM 11 C2' U B1286 83.851 -8.830 255.284 1.00 42.66 C
ATOM 12 O2' U B1286 82.622 -8.161 255.127 1.00 42.98 O
ATOM 13 C1' U B1286 84.543 -8.257 256.522 1.00 42.43 C
ATOM 14 N1 U B1286 86.032 -8.379 256.407 1.00 41.99 N
ATOM 15 C2 U B1286 86.788 -7.454 255.677 1.00 41.67 C
ATOM 16 O2 U B1286 86.298 -6.479 255.163 1.00 41.73 O
ATOM 17 N3 U B1286 88.131 -7.699 255.572 1.00 41.30 N
ATOM 18 C4 U B1286 88.763 -8.797 256.118 1.00 41.23 C
ATOM 19 O4 U B1286 89.965 -8.996 255.992 1.00 40.90 O
ATOM 20 C5 U B1286 87.937 -9.685 256.851 1.00 41.56 C
ATOM 21 C6 U B1286 86.653 -9.465 256.957 1.00 41.92 C
ATOM 22 P A B1287 82.922 -11.600 253.517 1.00 46.72 P
ATOM 23 OP1 A B1287 81.740 -12.370 253.158 1.00 47.17 O
ATOM 24 OP2 A B1287 84.206 -12.300 253.587 1.00 46.40 O
ATOM 25 O5' A B1287 83.050 -10.339 252.562 1.00 46.55 O
TER
Atoms:
OP1: (95.786,0.372,246.504)
OP2: (96.006,-1.592,248.163)
C3': (91.706,-0.456,250.928)
C1': (90.682,-2.397,250.131)
C5': (93.593,-0.546,249.199)
O4': (91.724,-2.044,249.249)
C8: (92.316,-4.149,251.007)
O2': (89.421,-0.399,250.368)
C6: (90.501,-5.997,253.439)
C5: (91.102,-5.167,252.471)
C4: (90.325,-4.226,251.890)
P: (95.202,-0.817,247.160)
C4': (92.130,-0.695,249.497)
C2': (90.395,-1.175,250.997)
C2: (88.566,-4.882,253.119)
N1: (89.215,-5.833,253.772)
N3: (88.999,-4.059,252.176)
N6: (91.103,-6.977,254.086)
N7: (92.341,-5.103,251.895)
N9: (91.113,-3.554,250.955)
O5': (93.801,-0.469,247.805)
O3': (91.595,0.915,251.250)
OP2: (96.006,-1.592,248.163)
C3': (91.706,-0.456,250.928)
C1': (90.682,-2.397,250.131)
C5': (93.593,-0.546,249.199)
O4': (91.724,-2.044,249.249)
C8: (92.316,-4.149,251.007)
O2': (89.421,-0.399,250.368)
C6: (90.501,-5.997,253.439)
C5: (91.102,-5.167,252.471)
C4: (90.325,-4.226,251.890)
P: (95.202,-0.817,247.160)
C4': (92.130,-0.695,249.497)
C2': (90.395,-1.175,250.997)
C2: (88.566,-4.882,253.119)
N1: (89.215,-5.833,253.772)
N3: (88.999,-4.059,252.176)
N6: (91.103,-6.977,254.086)
N7: (92.341,-5.103,251.895)
N9: (91.113,-3.554,250.955)
O5': (93.801,-0.469,247.805)
O3': (91.595,0.915,251.250)
C4: (88.763,-8.797,256.118)
N3: (88.131,-7.699,255.572)
OP1: (84.158,-14.007,258.779)
OP2: (86.538,-13.333,258.255)
C2: (86.788,-7.454,255.677)
C1': (84.543,-8.257,256.522)
C3': (83.613,-10.266,255.717)
O5': (84.727,-11.619,258.194)
O4': (84.094,-9.023,257.631)
C5': (83.370,-11.283,258.057)
P: (85.218,-12.993,258.827)
C4': (83.216,-10.082,257.172)
C2': (83.851,-8.830,255.284)
O2': (82.622,-8.161,255.127)
N1: (86.032,-8.379,256.407)
O4: (89.965,-8.996,255.992)
O2: (86.298,-6.479,255.163)
C6: (86.653,-9.465,256.957)
C5: (87.937,-9.685,256.851)
O3': (82.621,-10.941,254.964)
N3: (88.131,-7.699,255.572)
OP1: (84.158,-14.007,258.779)
OP2: (86.538,-13.333,258.255)
C2: (86.788,-7.454,255.677)
C1': (84.543,-8.257,256.522)
C3': (83.613,-10.266,255.717)
O5': (84.727,-11.619,258.194)
O4': (84.094,-9.023,257.631)
C5': (83.370,-11.283,258.057)
P: (85.218,-12.993,258.827)
C4': (83.216,-10.082,257.172)
C2': (83.851,-8.830,255.284)
O2': (82.622,-8.161,255.127)
N1: (86.032,-8.379,256.407)
O4: (89.965,-8.996,255.992)
O2: (86.298,-6.479,255.163)
C6: (86.653,-9.465,256.957)
C5: (87.937,-9.685,256.851)
O3': (82.621,-10.941,254.964)
Image (generated by PyMOL):