Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYO:F5:E6
Extra
PDB:
ATOM 1 O3' A A 4 43.556 20.602 50.801 1.00 82.83 O
ATOM 2 P A A 5 44.591 21.827 50.749 1.00 79.18 P
ATOM 3 OP1 A A 5 43.821 23.096 50.695 1.00 83.95 O
ATOM 4 OP2 A A 5 45.577 21.518 49.681 1.00 73.02 O
ATOM 5 O5' A A 5 45.353 21.743 52.145 1.00 67.04 O
ATOM 6 C5' A A 5 44.629 21.631 53.364 1.00 58.23 C
ATOM 7 C4' A A 5 45.557 21.253 54.492 1.00 58.32 C
ATOM 8 O4' A A 5 46.167 19.962 54.208 1.00 61.95 O
ATOM 9 C3' A A 5 46.754 22.159 54.704 1.00 51.25 C
ATOM 10 O3' A A 5 46.409 23.333 55.433 1.00 46.53 O
ATOM 11 C2' A A 5 47.693 21.249 55.488 1.00 49.85 C
ATOM 12 O2' A A 5 47.328 21.140 56.850 1.00 43.33 O
ATOM 13 C1' A A 5 47.459 19.906 54.793 1.00 44.22 C
ATOM 14 N9 A A 5 48.435 19.611 53.743 1.00 36.94 N
ATOM 15 C8 A A 5 48.246 19.621 52.384 1.00 39.93 C
ATOM 16 N7 A A 5 49.323 19.326 51.696 1.00 31.45 N
ATOM 17 C5 A A 5 50.285 19.099 52.666 1.00 37.89 C
ATOM 18 C6 A A 5 51.643 18.743 52.586 1.00 43.24 C
ATOM 19 N6 A A 5 52.288 18.540 51.431 1.00 34.81 N
ATOM 20 N1 A A 5 52.325 18.599 53.746 1.00 36.77 N
ATOM 21 C2 A A 5 51.675 18.800 54.900 1.00 32.72 C
ATOM 22 N3 A A 5 50.400 19.134 55.103 1.00 41.41 N
ATOM 23 C4 A A 5 49.753 19.269 53.932 1.00 42.24 C
ATOM 24 P U A 6 47.326 24.649 55.288 1.00 46.22 P
ATOM 25 OP1 U A 6 46.678 25.777 56.001 1.00 42.12 O
ATOM 26 OP2 U A 6 47.679 24.794 53.857 1.00 42.26 O
ATOM 27 O5' U A 6 48.666 24.267 56.055 1.00 45.94 O
TER
ATOM 1 O3' A B 5 62.102 15.398 53.532 1.00 37.86 O
ATOM 2 P U B 6 61.195 14.078 53.487 1.00 39.69 P
ATOM 3 OP1 U B 6 62.049 12.966 53.959 1.00 35.96 O
ATOM 4 OP2 U B 6 60.573 14.009 52.144 1.00 33.24 O
ATOM 5 O5' U B 6 60.065 14.362 54.574 1.00 36.65 O
ATOM 6 C5' U B 6 60.420 14.580 55.937 1.00 43.58 C
ATOM 7 C4' U B 6 59.236 15.088 56.729 1.00 41.18 C
ATOM 8 O4' U B 6 58.869 16.415 56.274 1.00 51.62 O
ATOM 9 C3' U B 6 57.953 14.285 56.620 1.00 41.75 C
ATOM 10 O3' U B 6 57.981 13.185 57.521 1.00 45.80 O
ATOM 11 C2' U B 6 56.923 15.320 57.039 1.00 43.91 C
ATOM 12 O2' U B 6 56.939 15.523 58.433 1.00 44.38 O
ATOM 13 C1' U B 6 57.463 16.571 56.344 1.00 44.82 C
ATOM 14 N1 U B 6 56.954 16.717 54.972 1.00 49.13 N
ATOM 15 C2 U B 6 55.676 17.218 54.809 1.00 44.70 C
ATOM 16 O2 U B 6 54.981 17.562 55.746 1.00 56.88 O
ATOM 17 N3 U B 6 55.244 17.301 53.506 1.00 40.85 N
ATOM 18 C4 U B 6 55.948 16.941 52.372 1.00 48.50 C
ATOM 19 O4 U B 6 55.399 17.001 51.267 1.00 45.03 O
ATOM 20 C5 U B 6 57.273 16.451 52.626 1.00 48.28 C
ATOM 21 C6 U B 6 57.718 16.358 53.884 1.00 43.19 C
ATOM 22 P U B 7 57.405 11.753 57.061 1.00 50.42 P
ATOM 23 OP1 U B 7 58.074 10.745 57.915 1.00 41.74 O
ATOM 24 OP2 U B 7 57.492 11.621 55.586 1.00 30.62 O
ATOM 25 O5' U B 7 55.866 11.832 57.470 1.00 49.15 O
TER
ATOM 2 P A A 5 44.591 21.827 50.749 1.00 79.18 P
ATOM 3 OP1 A A 5 43.821 23.096 50.695 1.00 83.95 O
ATOM 4 OP2 A A 5 45.577 21.518 49.681 1.00 73.02 O
ATOM 5 O5' A A 5 45.353 21.743 52.145 1.00 67.04 O
ATOM 6 C5' A A 5 44.629 21.631 53.364 1.00 58.23 C
ATOM 7 C4' A A 5 45.557 21.253 54.492 1.00 58.32 C
ATOM 8 O4' A A 5 46.167 19.962 54.208 1.00 61.95 O
ATOM 9 C3' A A 5 46.754 22.159 54.704 1.00 51.25 C
ATOM 10 O3' A A 5 46.409 23.333 55.433 1.00 46.53 O
ATOM 11 C2' A A 5 47.693 21.249 55.488 1.00 49.85 C
ATOM 12 O2' A A 5 47.328 21.140 56.850 1.00 43.33 O
ATOM 13 C1' A A 5 47.459 19.906 54.793 1.00 44.22 C
ATOM 14 N9 A A 5 48.435 19.611 53.743 1.00 36.94 N
ATOM 15 C8 A A 5 48.246 19.621 52.384 1.00 39.93 C
ATOM 16 N7 A A 5 49.323 19.326 51.696 1.00 31.45 N
ATOM 17 C5 A A 5 50.285 19.099 52.666 1.00 37.89 C
ATOM 18 C6 A A 5 51.643 18.743 52.586 1.00 43.24 C
ATOM 19 N6 A A 5 52.288 18.540 51.431 1.00 34.81 N
ATOM 20 N1 A A 5 52.325 18.599 53.746 1.00 36.77 N
ATOM 21 C2 A A 5 51.675 18.800 54.900 1.00 32.72 C
ATOM 22 N3 A A 5 50.400 19.134 55.103 1.00 41.41 N
ATOM 23 C4 A A 5 49.753 19.269 53.932 1.00 42.24 C
ATOM 24 P U A 6 47.326 24.649 55.288 1.00 46.22 P
ATOM 25 OP1 U A 6 46.678 25.777 56.001 1.00 42.12 O
ATOM 26 OP2 U A 6 47.679 24.794 53.857 1.00 42.26 O
ATOM 27 O5' U A 6 48.666 24.267 56.055 1.00 45.94 O
TER
ATOM 1 O3' A B 5 62.102 15.398 53.532 1.00 37.86 O
ATOM 2 P U B 6 61.195 14.078 53.487 1.00 39.69 P
ATOM 3 OP1 U B 6 62.049 12.966 53.959 1.00 35.96 O
ATOM 4 OP2 U B 6 60.573 14.009 52.144 1.00 33.24 O
ATOM 5 O5' U B 6 60.065 14.362 54.574 1.00 36.65 O
ATOM 6 C5' U B 6 60.420 14.580 55.937 1.00 43.58 C
ATOM 7 C4' U B 6 59.236 15.088 56.729 1.00 41.18 C
ATOM 8 O4' U B 6 58.869 16.415 56.274 1.00 51.62 O
ATOM 9 C3' U B 6 57.953 14.285 56.620 1.00 41.75 C
ATOM 10 O3' U B 6 57.981 13.185 57.521 1.00 45.80 O
ATOM 11 C2' U B 6 56.923 15.320 57.039 1.00 43.91 C
ATOM 12 O2' U B 6 56.939 15.523 58.433 1.00 44.38 O
ATOM 13 C1' U B 6 57.463 16.571 56.344 1.00 44.82 C
ATOM 14 N1 U B 6 56.954 16.717 54.972 1.00 49.13 N
ATOM 15 C2 U B 6 55.676 17.218 54.809 1.00 44.70 C
ATOM 16 O2 U B 6 54.981 17.562 55.746 1.00 56.88 O
ATOM 17 N3 U B 6 55.244 17.301 53.506 1.00 40.85 N
ATOM 18 C4 U B 6 55.948 16.941 52.372 1.00 48.50 C
ATOM 19 O4 U B 6 55.399 17.001 51.267 1.00 45.03 O
ATOM 20 C5 U B 6 57.273 16.451 52.626 1.00 48.28 C
ATOM 21 C6 U B 6 57.718 16.358 53.884 1.00 43.19 C
ATOM 22 P U B 7 57.405 11.753 57.061 1.00 50.42 P
ATOM 23 OP1 U B 7 58.074 10.745 57.915 1.00 41.74 O
ATOM 24 OP2 U B 7 57.492 11.621 55.586 1.00 30.62 O
ATOM 25 O5' U B 7 55.866 11.832 57.470 1.00 49.15 O
TER
Atoms:
OP1: (43.821,23.096,50.695)
OP2: (45.577,21.518,49.681)
C3': (46.754,22.159,54.704)
C1': (47.459,19.906,54.793)
C5': (44.629,21.631,53.364)
O4': (46.167,19.962,54.208)
C8: (48.246,19.621,52.384)
O2': (47.328,21.140,56.850)
C6: (51.643,18.743,52.586)
C5: (50.285,19.099,52.666)
C4: (49.753,19.269,53.932)
P: (44.591,21.827,50.749)
C4': (45.557,21.253,54.492)
C2': (47.693,21.249,55.488)
C2: (51.675,18.800,54.900)
N1: (52.325,18.599,53.746)
N3: (50.400,19.134,55.103)
N6: (52.288,18.540,51.431)
N7: (49.323,19.326,51.696)
N9: (48.435,19.611,53.743)
O5': (45.353,21.743,52.145)
O3': (46.409,23.333,55.433)
OP2: (45.577,21.518,49.681)
C3': (46.754,22.159,54.704)
C1': (47.459,19.906,54.793)
C5': (44.629,21.631,53.364)
O4': (46.167,19.962,54.208)
C8: (48.246,19.621,52.384)
O2': (47.328,21.140,56.850)
C6: (51.643,18.743,52.586)
C5: (50.285,19.099,52.666)
C4: (49.753,19.269,53.932)
P: (44.591,21.827,50.749)
C4': (45.557,21.253,54.492)
C2': (47.693,21.249,55.488)
C2: (51.675,18.800,54.900)
N1: (52.325,18.599,53.746)
N3: (50.400,19.134,55.103)
N6: (52.288,18.540,51.431)
N7: (49.323,19.326,51.696)
N9: (48.435,19.611,53.743)
O5': (45.353,21.743,52.145)
O3': (46.409,23.333,55.433)
C4: (55.948,16.941,52.372)
N3: (55.244,17.301,53.506)
OP1: (62.049,12.966,53.959)
OP2: (60.573,14.009,52.144)
C2: (55.676,17.218,54.809)
C1': (57.463,16.571,56.344)
C3': (57.953,14.285,56.620)
O5': (60.065,14.362,54.574)
O4': (58.869,16.415,56.274)
C5': (60.420,14.580,55.937)
P: (61.195,14.078,53.487)
C4': (59.236,15.088,56.729)
C2': (56.923,15.320,57.039)
O2': (56.939,15.523,58.433)
N1: (56.954,16.717,54.972)
O4: (55.399,17.001,51.267)
O2: (54.981,17.562,55.746)
C6: (57.718,16.358,53.884)
C5: (57.273,16.451,52.626)
O3': (57.981,13.185,57.521)
N3: (55.244,17.301,53.506)
OP1: (62.049,12.966,53.959)
OP2: (60.573,14.009,52.144)
C2: (55.676,17.218,54.809)
C1': (57.463,16.571,56.344)
C3': (57.953,14.285,56.620)
O5': (60.065,14.362,54.574)
O4': (58.869,16.415,56.274)
C5': (60.420,14.580,55.937)
P: (61.195,14.078,53.487)
C4': (59.236,15.088,56.729)
C2': (56.923,15.320,57.039)
O2': (56.939,15.523,58.433)
N1: (56.954,16.717,54.972)
O4: (55.399,17.001,51.267)
O2: (54.981,17.562,55.746)
C6: (57.718,16.358,53.884)
C5: (57.273,16.451,52.626)
O3': (57.981,13.185,57.521)
Image (generated by PyMOL):