Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A435:A25
Extra
PDB:
ATOM 1 O3' G A 434 35.263 127.615 33.131 1.00 43.11 O
ATOM 2 P A A 435 34.563 127.820 34.558 1.00 42.81 P
ATOM 3 OP1 A A 435 33.096 127.744 34.349 1.00 44.39 O
ATOM 4 OP2 A A 435 35.143 129.039 35.184 1.00 42.14 O
ATOM 5 O5' A A 435 35.008 126.490 35.309 1.00 42.02 O
ATOM 6 C5' A A 435 34.539 125.224 34.793 1.00 40.82 C
ATOM 7 C4' A A 435 35.100 124.062 35.565 1.00 39.59 C
ATOM 8 O4' A A 435 36.532 124.041 35.465 1.00 38.00 O
ATOM 9 C3' A A 435 34.800 124.023 37.043 1.00 39.62 C
ATOM 10 O3' A A 435 33.527 123.435 37.221 1.00 41.49 O
ATOM 11 C2' A A 435 35.913 123.126 37.550 1.00 39.17 C
ATOM 12 O2' A A 435 35.665 121.767 37.241 1.00 37.78 O
ATOM 13 C1' A A 435 37.078 123.599 36.680 1.00 39.62 C
ATOM 14 N9 A A 435 37.829 124.718 37.249 1.00 42.43 N
ATOM 15 C8 A A 435 37.774 126.050 36.899 1.00 42.07 C
ATOM 16 N7 A A 435 38.598 126.808 37.582 1.00 43.28 N
ATOM 17 C5 A A 435 39.234 125.921 38.440 1.00 43.83 C
ATOM 18 C6 A A 435 40.225 126.097 39.417 1.00 44.45 C
ATOM 19 N6 A A 435 40.802 127.266 39.700 1.00 43.56 N
ATOM 20 N1 A A 435 40.619 125.010 40.105 1.00 45.67 N
ATOM 21 C2 A A 435 40.062 123.829 39.818 1.00 44.63 C
ATOM 22 N3 A A 435 39.142 123.532 38.917 1.00 43.78 N
ATOM 23 C4 A A 435 38.762 124.635 38.253 1.00 43.74 C
ATOM 24 P G A 436 32.674 123.758 38.534 1.00 43.23 P
ATOM 25 OP1 G A 436 31.326 123.157 38.277 1.00 42.81 O
ATOM 26 OP2 G A 436 32.792 125.219 38.796 1.00 40.07 O
ATOM 27 O5' G A 436 33.407 122.911 39.680 1.00 44.19 O
TER
ATOM 1 O3' C B 24 47.226 124.903 47.709 1.00 36.32 O
ATOM 2 P U B 25 48.099 124.476 46.427 1.00 33.51 P
ATOM 3 OP1 U B 25 49.275 123.711 46.869 1.00 33.54 O
ATOM 4 OP2 U B 25 48.286 125.692 45.611 1.00 35.11 O
ATOM 5 O5' U B 25 47.156 123.457 45.661 1.00 34.11 O
ATOM 6 C5' U B 25 46.777 122.220 46.273 1.00 33.51 C
ATOM 7 C4' U B 25 45.678 121.560 45.484 1.00 33.58 C
ATOM 8 O4' U B 25 44.476 122.369 45.512 1.00 31.91 O
ATOM 9 C3' U B 25 45.956 121.383 44.008 1.00 34.07 C
ATOM 10 O3' U B 25 46.798 120.267 43.773 1.00 37.34 O
ATOM 11 C2' U B 25 44.558 121.175 43.468 1.00 32.94 C
ATOM 12 O2' U B 25 44.108 119.868 43.768 1.00 32.73 O
ATOM 13 C1' U B 25 43.774 122.197 44.297 1.00 32.89 C
ATOM 14 N1 U B 25 43.717 123.492 43.604 1.00 34.52 N
ATOM 15 C2 U B 25 42.752 123.661 42.627 1.00 35.42 C
ATOM 16 O2 U B 25 41.934 122.814 42.354 1.00 36.50 O
ATOM 17 N3 U B 25 42.792 124.868 41.975 1.00 35.86 N
ATOM 18 C4 U B 25 43.674 125.905 42.190 1.00 36.16 C
ATOM 19 O4 U B 25 43.636 126.887 41.452 1.00 35.55 O
ATOM 20 C5 U B 25 44.623 125.673 43.231 1.00 36.11 C
ATOM 21 C6 U B 25 44.612 124.507 43.890 1.00 35.98 C
ATOM 22 P C B 26 47.529 120.116 42.350 1.00 38.80 P
ATOM 23 OP1 C B 26 48.430 118.944 42.422 1.00 38.16 O
ATOM 24 OP2 C B 26 48.072 121.440 41.996 1.00 39.60 O
ATOM 25 O5' C B 26 46.338 119.763 41.361 1.00 39.89 O
TER
ATOM 2 P A A 435 34.563 127.820 34.558 1.00 42.81 P
ATOM 3 OP1 A A 435 33.096 127.744 34.349 1.00 44.39 O
ATOM 4 OP2 A A 435 35.143 129.039 35.184 1.00 42.14 O
ATOM 5 O5' A A 435 35.008 126.490 35.309 1.00 42.02 O
ATOM 6 C5' A A 435 34.539 125.224 34.793 1.00 40.82 C
ATOM 7 C4' A A 435 35.100 124.062 35.565 1.00 39.59 C
ATOM 8 O4' A A 435 36.532 124.041 35.465 1.00 38.00 O
ATOM 9 C3' A A 435 34.800 124.023 37.043 1.00 39.62 C
ATOM 10 O3' A A 435 33.527 123.435 37.221 1.00 41.49 O
ATOM 11 C2' A A 435 35.913 123.126 37.550 1.00 39.17 C
ATOM 12 O2' A A 435 35.665 121.767 37.241 1.00 37.78 O
ATOM 13 C1' A A 435 37.078 123.599 36.680 1.00 39.62 C
ATOM 14 N9 A A 435 37.829 124.718 37.249 1.00 42.43 N
ATOM 15 C8 A A 435 37.774 126.050 36.899 1.00 42.07 C
ATOM 16 N7 A A 435 38.598 126.808 37.582 1.00 43.28 N
ATOM 17 C5 A A 435 39.234 125.921 38.440 1.00 43.83 C
ATOM 18 C6 A A 435 40.225 126.097 39.417 1.00 44.45 C
ATOM 19 N6 A A 435 40.802 127.266 39.700 1.00 43.56 N
ATOM 20 N1 A A 435 40.619 125.010 40.105 1.00 45.67 N
ATOM 21 C2 A A 435 40.062 123.829 39.818 1.00 44.63 C
ATOM 22 N3 A A 435 39.142 123.532 38.917 1.00 43.78 N
ATOM 23 C4 A A 435 38.762 124.635 38.253 1.00 43.74 C
ATOM 24 P G A 436 32.674 123.758 38.534 1.00 43.23 P
ATOM 25 OP1 G A 436 31.326 123.157 38.277 1.00 42.81 O
ATOM 26 OP2 G A 436 32.792 125.219 38.796 1.00 40.07 O
ATOM 27 O5' G A 436 33.407 122.911 39.680 1.00 44.19 O
TER
ATOM 1 O3' C B 24 47.226 124.903 47.709 1.00 36.32 O
ATOM 2 P U B 25 48.099 124.476 46.427 1.00 33.51 P
ATOM 3 OP1 U B 25 49.275 123.711 46.869 1.00 33.54 O
ATOM 4 OP2 U B 25 48.286 125.692 45.611 1.00 35.11 O
ATOM 5 O5' U B 25 47.156 123.457 45.661 1.00 34.11 O
ATOM 6 C5' U B 25 46.777 122.220 46.273 1.00 33.51 C
ATOM 7 C4' U B 25 45.678 121.560 45.484 1.00 33.58 C
ATOM 8 O4' U B 25 44.476 122.369 45.512 1.00 31.91 O
ATOM 9 C3' U B 25 45.956 121.383 44.008 1.00 34.07 C
ATOM 10 O3' U B 25 46.798 120.267 43.773 1.00 37.34 O
ATOM 11 C2' U B 25 44.558 121.175 43.468 1.00 32.94 C
ATOM 12 O2' U B 25 44.108 119.868 43.768 1.00 32.73 O
ATOM 13 C1' U B 25 43.774 122.197 44.297 1.00 32.89 C
ATOM 14 N1 U B 25 43.717 123.492 43.604 1.00 34.52 N
ATOM 15 C2 U B 25 42.752 123.661 42.627 1.00 35.42 C
ATOM 16 O2 U B 25 41.934 122.814 42.354 1.00 36.50 O
ATOM 17 N3 U B 25 42.792 124.868 41.975 1.00 35.86 N
ATOM 18 C4 U B 25 43.674 125.905 42.190 1.00 36.16 C
ATOM 19 O4 U B 25 43.636 126.887 41.452 1.00 35.55 O
ATOM 20 C5 U B 25 44.623 125.673 43.231 1.00 36.11 C
ATOM 21 C6 U B 25 44.612 124.507 43.890 1.00 35.98 C
ATOM 22 P C B 26 47.529 120.116 42.350 1.00 38.80 P
ATOM 23 OP1 C B 26 48.430 118.944 42.422 1.00 38.16 O
ATOM 24 OP2 C B 26 48.072 121.440 41.996 1.00 39.60 O
ATOM 25 O5' C B 26 46.338 119.763 41.361 1.00 39.89 O
TER
Atoms:
OP1: (33.096,127.744,34.349)
OP2: (35.143,129.039,35.184)
C3': (34.800,124.023,37.043)
C1': (37.078,123.599,36.680)
C5': (34.539,125.224,34.793)
O4': (36.532,124.041,35.465)
C8: (37.774,126.050,36.899)
O2': (35.665,121.767,37.241)
C6: (40.225,126.097,39.417)
C5: (39.234,125.921,38.440)
C4: (38.762,124.635,38.253)
P: (34.563,127.820,34.558)
C4': (35.100,124.062,35.565)
C2': (35.913,123.126,37.550)
C2: (40.062,123.829,39.818)
N1: (40.619,125.010,40.105)
N3: (39.142,123.532,38.917)
N6: (40.802,127.266,39.700)
N7: (38.598,126.808,37.582)
N9: (37.829,124.718,37.249)
O5': (35.008,126.490,35.309)
O3': (33.527,123.435,37.221)
OP2: (35.143,129.039,35.184)
C3': (34.800,124.023,37.043)
C1': (37.078,123.599,36.680)
C5': (34.539,125.224,34.793)
O4': (36.532,124.041,35.465)
C8: (37.774,126.050,36.899)
O2': (35.665,121.767,37.241)
C6: (40.225,126.097,39.417)
C5: (39.234,125.921,38.440)
C4: (38.762,124.635,38.253)
P: (34.563,127.820,34.558)
C4': (35.100,124.062,35.565)
C2': (35.913,123.126,37.550)
C2: (40.062,123.829,39.818)
N1: (40.619,125.010,40.105)
N3: (39.142,123.532,38.917)
N6: (40.802,127.266,39.700)
N7: (38.598,126.808,37.582)
N9: (37.829,124.718,37.249)
O5': (35.008,126.490,35.309)
O3': (33.527,123.435,37.221)
C4: (43.674,125.905,42.190)
N3: (42.792,124.868,41.975)
OP1: (49.275,123.711,46.869)
OP2: (48.286,125.692,45.611)
C2: (42.752,123.661,42.627)
C1': (43.774,122.197,44.297)
C3': (45.956,121.383,44.008)
O5': (47.156,123.457,45.661)
O4': (44.476,122.369,45.512)
C5': (46.777,122.220,46.273)
P: (48.099,124.476,46.427)
C4': (45.678,121.560,45.484)
C2': (44.558,121.175,43.468)
O2': (44.108,119.868,43.768)
N1: (43.717,123.492,43.604)
O4: (43.636,126.887,41.452)
O2: (41.934,122.814,42.354)
C6: (44.612,124.507,43.890)
C5: (44.623,125.673,43.231)
O3': (46.798,120.267,43.773)
N3: (42.792,124.868,41.975)
OP1: (49.275,123.711,46.869)
OP2: (48.286,125.692,45.611)
C2: (42.752,123.661,42.627)
C1': (43.774,122.197,44.297)
C3': (45.956,121.383,44.008)
O5': (47.156,123.457,45.661)
O4': (44.476,122.369,45.512)
C5': (46.777,122.220,46.273)
P: (48.099,124.476,46.427)
C4': (45.678,121.560,45.484)
C2': (44.558,121.175,43.468)
O2': (44.108,119.868,43.768)
N1: (43.717,123.492,43.604)
O4: (43.636,126.887,41.452)
O2: (41.934,122.814,42.354)
C6: (44.612,124.507,43.890)
C5: (44.623,125.673,43.231)
O3': (46.798,120.267,43.773)
Image (generated by PyMOL):