Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1218:A1927
Extra
PDB:
ATOM 1 O3' A A1217 55.620 -71.356 2.453 1.00 30.90 O
ATOM 2 P A A1218 54.116 -71.039 2.982 1.00 33.27 P
ATOM 3 OP1 A A1218 54.141 -69.697 3.616 1.00 23.11 O
ATOM 4 OP2 A A1218 53.671 -72.218 3.804 1.00 38.18 O
ATOM 5 O5' A A1218 53.277 -70.980 1.630 1.00 26.40 O
ATOM 6 C5' A A1218 53.323 -69.838 0.788 1.00 25.34 C
ATOM 7 C4' A A1218 52.550 -70.071 -0.489 1.00 27.03 C
ATOM 8 O4' A A1218 52.952 -71.326 -1.065 1.00 32.51 O
ATOM 9 C3' A A1218 51.052 -70.183 -0.346 1.00 24.03 C
ATOM 10 O3' A A1218 50.427 -68.915 -0.385 1.00 32.09 O
ATOM 11 C2' A A1218 50.669 -71.064 -1.514 1.00 27.95 C
ATOM 12 O2' A A1218 50.607 -70.297 -2.691 1.00 38.31 O
ATOM 13 C1' A A1218 51.870 -71.969 -1.640 1.00 23.81 C
ATOM 14 N9 A A1218 51.707 -73.252 -0.962 1.00 32.63 N
ATOM 15 C8 A A1218 52.212 -73.605 0.271 1.00 31.43 C
ATOM 16 N7 A A1218 51.938 -74.844 0.583 1.00 32.10 N
ATOM 17 C5 A A1218 51.247 -75.327 -0.537 1.00 29.19 C
ATOM 18 C6 A A1218 50.690 -76.566 -0.857 1.00 28.68 C
ATOM 19 N6 A A1218 50.723 -77.643 -0.071 1.00 33.01 N
ATOM 20 N1 A A1218 50.070 -76.674 -2.042 1.00 34.55 N
ATOM 21 C2 A A1218 50.007 -75.623 -2.863 1.00 32.99 C
ATOM 22 N3 A A1218 50.493 -74.413 -2.678 1.00 32.08 N
ATOM 23 C4 A A1218 51.107 -74.351 -1.491 1.00 29.99 C
ATOM 24 P C A1219 49.042 -68.649 0.384 1.00 34.77 P
ATOM 25 OP1 C A1219 48.781 -67.205 0.279 1.00 36.07 O
ATOM 26 OP2 C A1219 49.143 -69.268 1.731 1.00 34.64 O
ATOM 27 O5' C A1219 47.996 -69.452 -0.489 1.00 32.04 O
TER
ATOM 1 O3' G B1926 43.697 -84.571 -2.706 1.00 24.28 O
ATOM 2 P U B1927 45.102 -84.741 -3.484 1.00 29.15 P
ATOM 3 OP1 U B1927 44.911 -85.742 -4.562 1.00 25.18 O
ATOM 4 OP2 U B1927 46.141 -84.989 -2.447 1.00 37.02 O
ATOM 5 O5' U B1927 45.331 -83.315 -4.112 1.00 23.16 O
ATOM 6 C5' U B1927 44.414 -82.794 -5.034 1.00 26.09 C
ATOM 7 C4' U B1927 44.826 -81.431 -5.486 1.00 26.65 C
ATOM 8 O4' U B1927 44.747 -80.505 -4.379 1.00 30.64 O
ATOM 9 C3' U B1927 46.251 -81.296 -5.946 1.00 25.65 C
ATOM 10 O3' U B1927 46.474 -81.791 -7.238 1.00 28.93 O
ATOM 11 C2' U B1927 46.483 -79.807 -5.812 1.00 26.98 C
ATOM 12 O2' U B1927 45.791 -79.109 -6.820 1.00 36.07 O
ATOM 13 C1' U B1927 45.782 -79.549 -4.492 1.00 32.04 C
ATOM 14 N1 U B1927 46.704 -79.733 -3.378 1.00 32.35 N
ATOM 15 C2 U B1927 47.475 -78.662 -3.103 1.00 29.95 C
ATOM 16 O2 U B1927 47.331 -77.641 -3.720 1.00 26.69 O
ATOM 17 N3 U B1927 48.377 -78.845 -2.094 1.00 31.67 N
ATOM 18 C4 U B1927 48.578 -79.990 -1.359 1.00 30.58 C
ATOM 19 O4 U B1927 49.427 -80.031 -0.461 1.00 31.12 O
ATOM 20 C5 U B1927 47.740 -81.070 -1.751 1.00 34.20 C
ATOM 21 C6 U B1927 46.857 -80.923 -2.732 1.00 33.39 C
ATOM 22 P G B1928 47.840 -82.551 -7.529 1.00 28.87 P
ATOM 23 OP1 G B1928 47.878 -82.881 -8.965 1.00 31.80 O
ATOM 24 OP2 G B1928 47.925 -83.652 -6.539 1.00 23.67 O
ATOM 25 O5' G B1928 48.925 -81.421 -7.211 1.00 32.02 O
TER
ATOM 2 P A A1218 54.116 -71.039 2.982 1.00 33.27 P
ATOM 3 OP1 A A1218 54.141 -69.697 3.616 1.00 23.11 O
ATOM 4 OP2 A A1218 53.671 -72.218 3.804 1.00 38.18 O
ATOM 5 O5' A A1218 53.277 -70.980 1.630 1.00 26.40 O
ATOM 6 C5' A A1218 53.323 -69.838 0.788 1.00 25.34 C
ATOM 7 C4' A A1218 52.550 -70.071 -0.489 1.00 27.03 C
ATOM 8 O4' A A1218 52.952 -71.326 -1.065 1.00 32.51 O
ATOM 9 C3' A A1218 51.052 -70.183 -0.346 1.00 24.03 C
ATOM 10 O3' A A1218 50.427 -68.915 -0.385 1.00 32.09 O
ATOM 11 C2' A A1218 50.669 -71.064 -1.514 1.00 27.95 C
ATOM 12 O2' A A1218 50.607 -70.297 -2.691 1.00 38.31 O
ATOM 13 C1' A A1218 51.870 -71.969 -1.640 1.00 23.81 C
ATOM 14 N9 A A1218 51.707 -73.252 -0.962 1.00 32.63 N
ATOM 15 C8 A A1218 52.212 -73.605 0.271 1.00 31.43 C
ATOM 16 N7 A A1218 51.938 -74.844 0.583 1.00 32.10 N
ATOM 17 C5 A A1218 51.247 -75.327 -0.537 1.00 29.19 C
ATOM 18 C6 A A1218 50.690 -76.566 -0.857 1.00 28.68 C
ATOM 19 N6 A A1218 50.723 -77.643 -0.071 1.00 33.01 N
ATOM 20 N1 A A1218 50.070 -76.674 -2.042 1.00 34.55 N
ATOM 21 C2 A A1218 50.007 -75.623 -2.863 1.00 32.99 C
ATOM 22 N3 A A1218 50.493 -74.413 -2.678 1.00 32.08 N
ATOM 23 C4 A A1218 51.107 -74.351 -1.491 1.00 29.99 C
ATOM 24 P C A1219 49.042 -68.649 0.384 1.00 34.77 P
ATOM 25 OP1 C A1219 48.781 -67.205 0.279 1.00 36.07 O
ATOM 26 OP2 C A1219 49.143 -69.268 1.731 1.00 34.64 O
ATOM 27 O5' C A1219 47.996 -69.452 -0.489 1.00 32.04 O
TER
ATOM 1 O3' G B1926 43.697 -84.571 -2.706 1.00 24.28 O
ATOM 2 P U B1927 45.102 -84.741 -3.484 1.00 29.15 P
ATOM 3 OP1 U B1927 44.911 -85.742 -4.562 1.00 25.18 O
ATOM 4 OP2 U B1927 46.141 -84.989 -2.447 1.00 37.02 O
ATOM 5 O5' U B1927 45.331 -83.315 -4.112 1.00 23.16 O
ATOM 6 C5' U B1927 44.414 -82.794 -5.034 1.00 26.09 C
ATOM 7 C4' U B1927 44.826 -81.431 -5.486 1.00 26.65 C
ATOM 8 O4' U B1927 44.747 -80.505 -4.379 1.00 30.64 O
ATOM 9 C3' U B1927 46.251 -81.296 -5.946 1.00 25.65 C
ATOM 10 O3' U B1927 46.474 -81.791 -7.238 1.00 28.93 O
ATOM 11 C2' U B1927 46.483 -79.807 -5.812 1.00 26.98 C
ATOM 12 O2' U B1927 45.791 -79.109 -6.820 1.00 36.07 O
ATOM 13 C1' U B1927 45.782 -79.549 -4.492 1.00 32.04 C
ATOM 14 N1 U B1927 46.704 -79.733 -3.378 1.00 32.35 N
ATOM 15 C2 U B1927 47.475 -78.662 -3.103 1.00 29.95 C
ATOM 16 O2 U B1927 47.331 -77.641 -3.720 1.00 26.69 O
ATOM 17 N3 U B1927 48.377 -78.845 -2.094 1.00 31.67 N
ATOM 18 C4 U B1927 48.578 -79.990 -1.359 1.00 30.58 C
ATOM 19 O4 U B1927 49.427 -80.031 -0.461 1.00 31.12 O
ATOM 20 C5 U B1927 47.740 -81.070 -1.751 1.00 34.20 C
ATOM 21 C6 U B1927 46.857 -80.923 -2.732 1.00 33.39 C
ATOM 22 P G B1928 47.840 -82.551 -7.529 1.00 28.87 P
ATOM 23 OP1 G B1928 47.878 -82.881 -8.965 1.00 31.80 O
ATOM 24 OP2 G B1928 47.925 -83.652 -6.539 1.00 23.67 O
ATOM 25 O5' G B1928 48.925 -81.421 -7.211 1.00 32.02 O
TER
Atoms:
OP1: (54.141,-69.697,3.616)
OP2: (53.671,-72.218,3.804)
C3': (51.052,-70.183,-0.346)
C1': (51.870,-71.969,-1.640)
C5': (53.323,-69.838,0.788)
O4': (52.952,-71.326,-1.065)
C8: (52.212,-73.605,0.271)
O2': (50.607,-70.297,-2.691)
C6: (50.690,-76.566,-0.857)
C5: (51.247,-75.327,-0.537)
C4: (51.107,-74.351,-1.491)
P: (54.116,-71.039,2.982)
C4': (52.550,-70.071,-0.489)
C2': (50.669,-71.064,-1.514)
C2: (50.007,-75.623,-2.863)
N1: (50.070,-76.674,-2.042)
N3: (50.493,-74.413,-2.678)
N6: (50.723,-77.643,-0.071)
N7: (51.938,-74.844,0.583)
N9: (51.707,-73.252,-0.962)
O5': (53.277,-70.980,1.630)
O3': (50.427,-68.915,-0.385)
OP2: (53.671,-72.218,3.804)
C3': (51.052,-70.183,-0.346)
C1': (51.870,-71.969,-1.640)
C5': (53.323,-69.838,0.788)
O4': (52.952,-71.326,-1.065)
C8: (52.212,-73.605,0.271)
O2': (50.607,-70.297,-2.691)
C6: (50.690,-76.566,-0.857)
C5: (51.247,-75.327,-0.537)
C4: (51.107,-74.351,-1.491)
P: (54.116,-71.039,2.982)
C4': (52.550,-70.071,-0.489)
C2': (50.669,-71.064,-1.514)
C2: (50.007,-75.623,-2.863)
N1: (50.070,-76.674,-2.042)
N3: (50.493,-74.413,-2.678)
N6: (50.723,-77.643,-0.071)
N7: (51.938,-74.844,0.583)
N9: (51.707,-73.252,-0.962)
O5': (53.277,-70.980,1.630)
O3': (50.427,-68.915,-0.385)
C4: (48.578,-79.990,-1.359)
N3: (48.377,-78.845,-2.094)
OP1: (44.911,-85.742,-4.562)
OP2: (46.141,-84.989,-2.447)
C2: (47.475,-78.662,-3.103)
C1': (45.782,-79.549,-4.492)
C3': (46.251,-81.296,-5.946)
O5': (45.331,-83.315,-4.112)
O4': (44.747,-80.505,-4.379)
C5': (44.414,-82.794,-5.034)
P: (45.102,-84.741,-3.484)
C4': (44.826,-81.431,-5.486)
C2': (46.483,-79.807,-5.812)
O2': (45.791,-79.109,-6.820)
N1: (46.704,-79.733,-3.378)
O4: (49.427,-80.031,-0.461)
O2: (47.331,-77.641,-3.720)
C6: (46.857,-80.923,-2.732)
C5: (47.740,-81.070,-1.751)
O3': (46.474,-81.791,-7.238)
N3: (48.377,-78.845,-2.094)
OP1: (44.911,-85.742,-4.562)
OP2: (46.141,-84.989,-2.447)
C2: (47.475,-78.662,-3.103)
C1': (45.782,-79.549,-4.492)
C3': (46.251,-81.296,-5.946)
O5': (45.331,-83.315,-4.112)
O4': (44.747,-80.505,-4.379)
C5': (44.414,-82.794,-5.034)
P: (45.102,-84.741,-3.484)
C4': (44.826,-81.431,-5.486)
C2': (46.483,-79.807,-5.812)
O2': (45.791,-79.109,-6.820)
N1: (46.704,-79.733,-3.378)
O4: (49.427,-80.031,-0.461)
O2: (47.331,-77.641,-3.720)
C6: (46.857,-80.923,-2.732)
C5: (47.740,-81.070,-1.751)
O3': (46.474,-81.791,-7.238)
Image (generated by PyMOL):