Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2420:A2434
Extra
PDB:
ATOM 1 O3' A A2419 71.696 -28.555 -10.760 1.00 25.53 O
ATOM 2 P A A2420 73.038 -27.851 -11.294 1.00 32.84 P
ATOM 3 OP1 A A2420 72.623 -26.623 -12.008 1.00 38.98 O
ATOM 4 OP2 A A2420 73.842 -28.887 -12.037 1.00 31.14 O
ATOM 5 O5' A A2420 73.771 -27.456 -9.945 1.00 28.37 O
ATOM 6 C5' A A2420 73.207 -26.474 -9.119 1.00 32.99 C
ATOM 7 C4' A A2420 73.976 -26.294 -7.857 1.00 33.02 C
ATOM 8 O4' A A2420 74.028 -27.533 -7.126 1.00 39.69 O
ATOM 9 C3' A A2420 75.422 -25.905 -7.996 1.00 30.76 C
ATOM 10 O3' A A2420 75.594 -24.541 -8.338 1.00 32.77 O
ATOM 11 C2' A A2420 75.952 -26.261 -6.619 1.00 37.62 C
ATOM 12 O2' A A2420 75.527 -25.305 -5.663 1.00 47.02 O
ATOM 13 C1' A A2420 75.199 -27.561 -6.350 1.00 36.18 C
ATOM 14 N9 A A2420 75.985 -28.744 -6.730 1.00 33.08 N
ATOM 15 C8 A A2420 76.026 -29.530 -7.863 1.00 30.29 C
ATOM 16 N7 A A2420 76.881 -30.517 -7.812 1.00 25.95 N
ATOM 17 C5 A A2420 77.444 -30.351 -6.553 1.00 28.35 C
ATOM 18 C6 A A2420 78.417 -31.048 -5.831 1.00 27.69 C
ATOM 19 N6 A A2420 79.081 -32.115 -6.237 1.00 29.63 N
ATOM 20 N1 A A2420 78.691 -30.600 -4.605 1.00 33.92 N
ATOM 21 C2 A A2420 78.074 -29.520 -4.102 1.00 35.42 C
ATOM 22 N3 A A2420 77.144 -28.772 -4.667 1.00 36.96 N
ATOM 23 C4 A A2420 76.888 -29.269 -5.889 1.00 32.66 C
ATOM 24 P C A2421 77.026 -24.013 -8.839 1.00 37.73 P
ATOM 25 OP1 C A2421 76.881 -22.581 -9.201 1.00 34.36 O
ATOM 26 OP2 C A2421 77.503 -24.963 -9.890 1.00 33.56 O
ATOM 27 O5' C A2421 77.915 -24.147 -7.517 1.00 29.43 O
TER
ATOM 1 O3' G B2433 87.253 -34.573 -0.318 1.00 38.95 O
ATOM 2 P U B2434 85.888 -35.217 0.200 1.00 45.21 P
ATOM 3 OP1 U B2434 86.109 -35.702 1.581 1.00 59.32 O
ATOM 4 OP2 U B2434 85.439 -36.180 -0.838 1.00 38.52 O
ATOM 5 O5' U B2434 84.926 -33.974 0.231 1.00 41.36 O
ATOM 6 C5' U B2434 85.017 -33.025 1.260 1.00 29.48 C
ATOM 7 C4' U B2434 84.137 -31.850 0.974 1.00 33.87 C
ATOM 8 O4' U B2434 84.322 -31.425 -0.401 1.00 40.04 O
ATOM 9 C3' U B2434 82.639 -32.077 1.059 1.00 24.89 C
ATOM 10 O3' U B2434 82.150 -32.145 2.390 1.00 31.22 O
ATOM 11 C2' U B2434 82.128 -30.874 0.296 1.00 34.42 C
ATOM 12 O2' U B2434 82.268 -29.706 1.087 1.00 37.19 O
ATOM 13 C1' U B2434 83.146 -30.793 -0.850 1.00 36.58 C
ATOM 14 N1 U B2434 82.678 -31.488 -2.044 1.00 31.51 N
ATOM 15 C2 U B2434 81.529 -31.047 -2.625 1.00 28.68 C
ATOM 16 O2 U B2434 80.907 -30.092 -2.195 1.00 38.40 O
ATOM 17 N3 U B2434 81.125 -31.756 -3.713 1.00 28.50 N
ATOM 18 C4 U B2434 81.753 -32.830 -4.272 1.00 37.14 C
ATOM 19 O4 U B2434 81.287 -33.369 -5.274 1.00 45.19 O
ATOM 20 C5 U B2434 82.952 -33.216 -3.603 1.00 45.46 C
ATOM 21 C6 U B2434 83.369 -32.546 -2.529 1.00 37.05 C
ATOM 22 P U B2435 80.923 -33.126 2.747 1.00 38.45 P
ATOM 23 OP1 U B2435 80.761 -33.109 4.225 1.00 29.41 O
ATOM 24 OP2 U B2435 81.185 -34.422 2.068 1.00 33.07 O
ATOM 25 O5' U B2435 79.689 -32.402 2.065 1.00 33.41 O
TER
ATOM 2 P A A2420 73.038 -27.851 -11.294 1.00 32.84 P
ATOM 3 OP1 A A2420 72.623 -26.623 -12.008 1.00 38.98 O
ATOM 4 OP2 A A2420 73.842 -28.887 -12.037 1.00 31.14 O
ATOM 5 O5' A A2420 73.771 -27.456 -9.945 1.00 28.37 O
ATOM 6 C5' A A2420 73.207 -26.474 -9.119 1.00 32.99 C
ATOM 7 C4' A A2420 73.976 -26.294 -7.857 1.00 33.02 C
ATOM 8 O4' A A2420 74.028 -27.533 -7.126 1.00 39.69 O
ATOM 9 C3' A A2420 75.422 -25.905 -7.996 1.00 30.76 C
ATOM 10 O3' A A2420 75.594 -24.541 -8.338 1.00 32.77 O
ATOM 11 C2' A A2420 75.952 -26.261 -6.619 1.00 37.62 C
ATOM 12 O2' A A2420 75.527 -25.305 -5.663 1.00 47.02 O
ATOM 13 C1' A A2420 75.199 -27.561 -6.350 1.00 36.18 C
ATOM 14 N9 A A2420 75.985 -28.744 -6.730 1.00 33.08 N
ATOM 15 C8 A A2420 76.026 -29.530 -7.863 1.00 30.29 C
ATOM 16 N7 A A2420 76.881 -30.517 -7.812 1.00 25.95 N
ATOM 17 C5 A A2420 77.444 -30.351 -6.553 1.00 28.35 C
ATOM 18 C6 A A2420 78.417 -31.048 -5.831 1.00 27.69 C
ATOM 19 N6 A A2420 79.081 -32.115 -6.237 1.00 29.63 N
ATOM 20 N1 A A2420 78.691 -30.600 -4.605 1.00 33.92 N
ATOM 21 C2 A A2420 78.074 -29.520 -4.102 1.00 35.42 C
ATOM 22 N3 A A2420 77.144 -28.772 -4.667 1.00 36.96 N
ATOM 23 C4 A A2420 76.888 -29.269 -5.889 1.00 32.66 C
ATOM 24 P C A2421 77.026 -24.013 -8.839 1.00 37.73 P
ATOM 25 OP1 C A2421 76.881 -22.581 -9.201 1.00 34.36 O
ATOM 26 OP2 C A2421 77.503 -24.963 -9.890 1.00 33.56 O
ATOM 27 O5' C A2421 77.915 -24.147 -7.517 1.00 29.43 O
TER
ATOM 1 O3' G B2433 87.253 -34.573 -0.318 1.00 38.95 O
ATOM 2 P U B2434 85.888 -35.217 0.200 1.00 45.21 P
ATOM 3 OP1 U B2434 86.109 -35.702 1.581 1.00 59.32 O
ATOM 4 OP2 U B2434 85.439 -36.180 -0.838 1.00 38.52 O
ATOM 5 O5' U B2434 84.926 -33.974 0.231 1.00 41.36 O
ATOM 6 C5' U B2434 85.017 -33.025 1.260 1.00 29.48 C
ATOM 7 C4' U B2434 84.137 -31.850 0.974 1.00 33.87 C
ATOM 8 O4' U B2434 84.322 -31.425 -0.401 1.00 40.04 O
ATOM 9 C3' U B2434 82.639 -32.077 1.059 1.00 24.89 C
ATOM 10 O3' U B2434 82.150 -32.145 2.390 1.00 31.22 O
ATOM 11 C2' U B2434 82.128 -30.874 0.296 1.00 34.42 C
ATOM 12 O2' U B2434 82.268 -29.706 1.087 1.00 37.19 O
ATOM 13 C1' U B2434 83.146 -30.793 -0.850 1.00 36.58 C
ATOM 14 N1 U B2434 82.678 -31.488 -2.044 1.00 31.51 N
ATOM 15 C2 U B2434 81.529 -31.047 -2.625 1.00 28.68 C
ATOM 16 O2 U B2434 80.907 -30.092 -2.195 1.00 38.40 O
ATOM 17 N3 U B2434 81.125 -31.756 -3.713 1.00 28.50 N
ATOM 18 C4 U B2434 81.753 -32.830 -4.272 1.00 37.14 C
ATOM 19 O4 U B2434 81.287 -33.369 -5.274 1.00 45.19 O
ATOM 20 C5 U B2434 82.952 -33.216 -3.603 1.00 45.46 C
ATOM 21 C6 U B2434 83.369 -32.546 -2.529 1.00 37.05 C
ATOM 22 P U B2435 80.923 -33.126 2.747 1.00 38.45 P
ATOM 23 OP1 U B2435 80.761 -33.109 4.225 1.00 29.41 O
ATOM 24 OP2 U B2435 81.185 -34.422 2.068 1.00 33.07 O
ATOM 25 O5' U B2435 79.689 -32.402 2.065 1.00 33.41 O
TER
Atoms:
OP1: (72.623,-26.623,-12.008)
OP2: (73.842,-28.887,-12.037)
C3': (75.422,-25.905,-7.996)
C1': (75.199,-27.561,-6.350)
C5': (73.207,-26.474,-9.119)
O4': (74.028,-27.533,-7.126)
C8: (76.026,-29.530,-7.863)
O2': (75.527,-25.305,-5.663)
C6: (78.417,-31.048,-5.831)
C5: (77.444,-30.351,-6.553)
C4: (76.888,-29.269,-5.889)
P: (73.038,-27.851,-11.294)
C4': (73.976,-26.294,-7.857)
C2': (75.952,-26.261,-6.619)
C2: (78.074,-29.520,-4.102)
N1: (78.691,-30.600,-4.605)
N3: (77.144,-28.772,-4.667)
N6: (79.081,-32.115,-6.237)
N7: (76.881,-30.517,-7.812)
N9: (75.985,-28.744,-6.730)
O5': (73.771,-27.456,-9.945)
O3': (75.594,-24.541,-8.338)
OP2: (73.842,-28.887,-12.037)
C3': (75.422,-25.905,-7.996)
C1': (75.199,-27.561,-6.350)
C5': (73.207,-26.474,-9.119)
O4': (74.028,-27.533,-7.126)
C8: (76.026,-29.530,-7.863)
O2': (75.527,-25.305,-5.663)
C6: (78.417,-31.048,-5.831)
C5: (77.444,-30.351,-6.553)
C4: (76.888,-29.269,-5.889)
P: (73.038,-27.851,-11.294)
C4': (73.976,-26.294,-7.857)
C2': (75.952,-26.261,-6.619)
C2: (78.074,-29.520,-4.102)
N1: (78.691,-30.600,-4.605)
N3: (77.144,-28.772,-4.667)
N6: (79.081,-32.115,-6.237)
N7: (76.881,-30.517,-7.812)
N9: (75.985,-28.744,-6.730)
O5': (73.771,-27.456,-9.945)
O3': (75.594,-24.541,-8.338)
C4: (81.753,-32.830,-4.272)
N3: (81.125,-31.756,-3.713)
OP1: (86.109,-35.702,1.581)
OP2: (85.439,-36.180,-0.838)
C2: (81.529,-31.047,-2.625)
C1': (83.146,-30.793,-0.850)
C3': (82.639,-32.077,1.059)
O5': (84.926,-33.974,0.231)
O4': (84.322,-31.425,-0.401)
C5': (85.017,-33.025,1.260)
P: (85.888,-35.217,0.200)
C4': (84.137,-31.850,0.974)
C2': (82.128,-30.874,0.296)
O2': (82.268,-29.706,1.087)
N1: (82.678,-31.488,-2.044)
O4: (81.287,-33.369,-5.274)
O2: (80.907,-30.092,-2.195)
C6: (83.369,-32.546,-2.529)
C5: (82.952,-33.216,-3.603)
O3': (82.150,-32.145,2.390)
N3: (81.125,-31.756,-3.713)
OP1: (86.109,-35.702,1.581)
OP2: (85.439,-36.180,-0.838)
C2: (81.529,-31.047,-2.625)
C1': (83.146,-30.793,-0.850)
C3': (82.639,-32.077,1.059)
O5': (84.926,-33.974,0.231)
O4': (84.322,-31.425,-0.401)
C5': (85.017,-33.025,1.260)
P: (85.888,-35.217,0.200)
C4': (84.137,-31.850,0.974)
C2': (82.128,-30.874,0.296)
O2': (82.268,-29.706,1.087)
N1: (82.678,-31.488,-2.044)
O4: (81.287,-33.369,-5.274)
O2: (80.907,-30.092,-2.195)
C6: (83.369,-32.546,-2.529)
C5: (82.952,-33.216,-3.603)
O3': (82.150,-32.145,2.390)
Image (generated by PyMOL):