Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:027:0433
Extra
PDB:
ATOM 1 O3' C A 26 45.136 117.574 38.135 1.00 34.43 O
ATOM 2 P A A 27 46.139 117.726 36.890 1.00 37.51 P
ATOM 3 OP1 A A 27 46.561 116.354 36.522 1.00 37.20 O
ATOM 4 OP2 A A 27 47.166 118.752 37.193 1.00 37.78 O
ATOM 5 O5' A A 27 45.217 118.315 35.734 1.00 39.81 O
ATOM 6 C5' A A 27 44.132 117.545 35.209 1.00 39.60 C
ATOM 7 C4' A A 27 43.372 118.342 34.185 1.00 41.16 C
ATOM 8 O4' A A 27 42.803 119.522 34.810 1.00 40.69 O
ATOM 9 C3' A A 27 44.161 118.903 33.014 1.00 40.69 C
ATOM 10 O3' A A 27 44.408 117.915 32.016 1.00 41.06 O
ATOM 11 C2' A A 27 43.221 119.992 32.523 1.00 40.79 C
ATOM 12 O2' A A 27 42.112 119.459 31.830 1.00 41.09 O
ATOM 13 C1' A A 27 42.709 120.559 33.848 1.00 42.09 C
ATOM 14 N9 A A 27 43.489 121.702 34.318 1.00 43.42 N
ATOM 15 C8 A A 27 44.467 121.733 35.281 1.00 44.06 C
ATOM 16 N7 A A 27 44.961 122.927 35.494 1.00 44.08 N
ATOM 17 C5 A A 27 44.263 123.739 34.610 1.00 44.47 C
ATOM 18 C6 A A 27 44.306 125.126 34.356 1.00 44.45 C
ATOM 19 N6 A A 27 45.109 125.976 34.999 1.00 43.70 N
ATOM 20 N1 A A 27 43.481 125.615 33.404 1.00 44.22 N
ATOM 21 C2 A A 27 42.675 124.766 32.758 1.00 44.93 C
ATOM 22 N3 A A 27 42.537 123.450 32.913 1.00 45.12 N
ATOM 23 C4 A A 27 43.366 122.994 33.868 1.00 44.44 C
ATOM 24 P G A 28 45.695 118.049 31.060 1.00 42.89 P
ATOM 25 OP1 G A 28 45.895 116.750 30.386 1.00 42.58 O
ATOM 26 OP2 G A 28 46.813 118.635 31.833 1.00 46.12 O
ATOM 27 O5' G A 28 45.246 119.130 29.978 1.00 43.29 O
TER
ATOM 1 O3' C B 432 44.222 135.246 30.238 1.00 40.87 O
ATOM 2 P U B 433 43.104 135.216 31.394 1.00 43.13 P
ATOM 3 OP1 U B 433 42.231 136.403 31.198 1.00 44.20 O
ATOM 4 OP2 U B 433 43.771 135.012 32.709 1.00 43.68 O
ATOM 5 O5' U B 433 42.245 133.919 31.061 1.00 41.36 O
ATOM 6 C5' U B 433 41.466 133.844 29.859 1.00 40.67 C
ATOM 7 C4' U B 433 40.949 132.443 29.660 1.00 40.81 C
ATOM 8 O4' U B 433 42.067 131.525 29.526 1.00 42.90 O
ATOM 9 C3' U B 433 40.151 131.859 30.809 1.00 39.98 C
ATOM 10 O3' U B 433 38.812 132.312 30.778 1.00 40.65 O
ATOM 11 C2' U B 433 40.260 130.369 30.530 1.00 40.98 C
ATOM 12 O2' U B 433 39.427 129.969 29.467 1.00 41.24 O
ATOM 13 C1' U B 433 41.713 130.262 30.067 1.00 41.72 C
ATOM 14 N1 U B 433 42.628 129.951 31.176 1.00 43.49 N
ATOM 15 C2 U B 433 42.815 128.617 31.501 1.00 43.50 C
ATOM 16 O2 U B 433 42.269 127.710 30.908 1.00 45.82 O
ATOM 17 N3 U B 433 43.659 128.389 32.556 1.00 44.44 N
ATOM 18 C4 U B 433 44.319 129.337 33.313 1.00 44.83 C
ATOM 19 O4 U B 433 44.982 128.978 34.286 1.00 44.79 O
ATOM 20 C5 U B 433 44.086 130.692 32.909 1.00 44.27 C
ATOM 21 C6 U B 433 43.274 130.947 31.880 1.00 43.38 C
ATOM 22 P G B 434 37.884 132.147 32.075 1.00 41.78 P
ATOM 23 OP1 G B 434 36.584 132.797 31.744 1.00 40.31 O
ATOM 24 OP2 G B 434 38.650 132.613 33.260 1.00 40.24 O
ATOM 25 O5' G B 434 37.656 130.570 32.188 1.00 39.47 O
TER
ATOM 2 P A A 27 46.139 117.726 36.890 1.00 37.51 P
ATOM 3 OP1 A A 27 46.561 116.354 36.522 1.00 37.20 O
ATOM 4 OP2 A A 27 47.166 118.752 37.193 1.00 37.78 O
ATOM 5 O5' A A 27 45.217 118.315 35.734 1.00 39.81 O
ATOM 6 C5' A A 27 44.132 117.545 35.209 1.00 39.60 C
ATOM 7 C4' A A 27 43.372 118.342 34.185 1.00 41.16 C
ATOM 8 O4' A A 27 42.803 119.522 34.810 1.00 40.69 O
ATOM 9 C3' A A 27 44.161 118.903 33.014 1.00 40.69 C
ATOM 10 O3' A A 27 44.408 117.915 32.016 1.00 41.06 O
ATOM 11 C2' A A 27 43.221 119.992 32.523 1.00 40.79 C
ATOM 12 O2' A A 27 42.112 119.459 31.830 1.00 41.09 O
ATOM 13 C1' A A 27 42.709 120.559 33.848 1.00 42.09 C
ATOM 14 N9 A A 27 43.489 121.702 34.318 1.00 43.42 N
ATOM 15 C8 A A 27 44.467 121.733 35.281 1.00 44.06 C
ATOM 16 N7 A A 27 44.961 122.927 35.494 1.00 44.08 N
ATOM 17 C5 A A 27 44.263 123.739 34.610 1.00 44.47 C
ATOM 18 C6 A A 27 44.306 125.126 34.356 1.00 44.45 C
ATOM 19 N6 A A 27 45.109 125.976 34.999 1.00 43.70 N
ATOM 20 N1 A A 27 43.481 125.615 33.404 1.00 44.22 N
ATOM 21 C2 A A 27 42.675 124.766 32.758 1.00 44.93 C
ATOM 22 N3 A A 27 42.537 123.450 32.913 1.00 45.12 N
ATOM 23 C4 A A 27 43.366 122.994 33.868 1.00 44.44 C
ATOM 24 P G A 28 45.695 118.049 31.060 1.00 42.89 P
ATOM 25 OP1 G A 28 45.895 116.750 30.386 1.00 42.58 O
ATOM 26 OP2 G A 28 46.813 118.635 31.833 1.00 46.12 O
ATOM 27 O5' G A 28 45.246 119.130 29.978 1.00 43.29 O
TER
ATOM 1 O3' C B 432 44.222 135.246 30.238 1.00 40.87 O
ATOM 2 P U B 433 43.104 135.216 31.394 1.00 43.13 P
ATOM 3 OP1 U B 433 42.231 136.403 31.198 1.00 44.20 O
ATOM 4 OP2 U B 433 43.771 135.012 32.709 1.00 43.68 O
ATOM 5 O5' U B 433 42.245 133.919 31.061 1.00 41.36 O
ATOM 6 C5' U B 433 41.466 133.844 29.859 1.00 40.67 C
ATOM 7 C4' U B 433 40.949 132.443 29.660 1.00 40.81 C
ATOM 8 O4' U B 433 42.067 131.525 29.526 1.00 42.90 O
ATOM 9 C3' U B 433 40.151 131.859 30.809 1.00 39.98 C
ATOM 10 O3' U B 433 38.812 132.312 30.778 1.00 40.65 O
ATOM 11 C2' U B 433 40.260 130.369 30.530 1.00 40.98 C
ATOM 12 O2' U B 433 39.427 129.969 29.467 1.00 41.24 O
ATOM 13 C1' U B 433 41.713 130.262 30.067 1.00 41.72 C
ATOM 14 N1 U B 433 42.628 129.951 31.176 1.00 43.49 N
ATOM 15 C2 U B 433 42.815 128.617 31.501 1.00 43.50 C
ATOM 16 O2 U B 433 42.269 127.710 30.908 1.00 45.82 O
ATOM 17 N3 U B 433 43.659 128.389 32.556 1.00 44.44 N
ATOM 18 C4 U B 433 44.319 129.337 33.313 1.00 44.83 C
ATOM 19 O4 U B 433 44.982 128.978 34.286 1.00 44.79 O
ATOM 20 C5 U B 433 44.086 130.692 32.909 1.00 44.27 C
ATOM 21 C6 U B 433 43.274 130.947 31.880 1.00 43.38 C
ATOM 22 P G B 434 37.884 132.147 32.075 1.00 41.78 P
ATOM 23 OP1 G B 434 36.584 132.797 31.744 1.00 40.31 O
ATOM 24 OP2 G B 434 38.650 132.613 33.260 1.00 40.24 O
ATOM 25 O5' G B 434 37.656 130.570 32.188 1.00 39.47 O
TER
Atoms:
OP1: (46.561,116.354,36.522)
OP2: (47.166,118.752,37.193)
C3': (44.161,118.903,33.014)
C1': (42.709,120.559,33.848)
C5': (44.132,117.545,35.209)
O4': (42.803,119.522,34.810)
C8: (44.467,121.733,35.281)
O2': (42.112,119.459,31.830)
C6: (44.306,125.126,34.356)
C5: (44.263,123.739,34.610)
C4: (43.366,122.994,33.868)
P: (46.139,117.726,36.890)
C4': (43.372,118.342,34.185)
C2': (43.221,119.992,32.523)
C2: (42.675,124.766,32.758)
N1: (43.481,125.615,33.404)
N3: (42.537,123.450,32.913)
N6: (45.109,125.976,34.999)
N7: (44.961,122.927,35.494)
N9: (43.489,121.702,34.318)
O5': (45.217,118.315,35.734)
O3': (44.408,117.915,32.016)
OP2: (47.166,118.752,37.193)
C3': (44.161,118.903,33.014)
C1': (42.709,120.559,33.848)
C5': (44.132,117.545,35.209)
O4': (42.803,119.522,34.810)
C8: (44.467,121.733,35.281)
O2': (42.112,119.459,31.830)
C6: (44.306,125.126,34.356)
C5: (44.263,123.739,34.610)
C4: (43.366,122.994,33.868)
P: (46.139,117.726,36.890)
C4': (43.372,118.342,34.185)
C2': (43.221,119.992,32.523)
C2: (42.675,124.766,32.758)
N1: (43.481,125.615,33.404)
N3: (42.537,123.450,32.913)
N6: (45.109,125.976,34.999)
N7: (44.961,122.927,35.494)
N9: (43.489,121.702,34.318)
O5': (45.217,118.315,35.734)
O3': (44.408,117.915,32.016)
C4: (44.319,129.337,33.313)
N3: (43.659,128.389,32.556)
OP1: (42.231,136.403,31.198)
OP2: (43.771,135.012,32.709)
C2: (42.815,128.617,31.501)
C1': (41.713,130.262,30.067)
C3': (40.151,131.859,30.809)
O5': (42.245,133.919,31.061)
O4': (42.067,131.525,29.526)
C5': (41.466,133.844,29.859)
P: (43.104,135.216,31.394)
C4': (40.949,132.443,29.660)
C2': (40.260,130.369,30.530)
O2': (39.427,129.969,29.467)
N1: (42.628,129.951,31.176)
O4: (44.982,128.978,34.286)
O2: (42.269,127.710,30.908)
C6: (43.274,130.947,31.880)
C5: (44.086,130.692,32.909)
O3': (38.812,132.312,30.778)
N3: (43.659,128.389,32.556)
OP1: (42.231,136.403,31.198)
OP2: (43.771,135.012,32.709)
C2: (42.815,128.617,31.501)
C1': (41.713,130.262,30.067)
C3': (40.151,131.859,30.809)
O5': (42.245,133.919,31.061)
O4': (42.067,131.525,29.526)
C5': (41.466,133.844,29.859)
P: (43.104,135.216,31.394)
C4': (40.949,132.443,29.660)
C2': (40.260,130.369,30.530)
O2': (39.427,129.969,29.467)
N1: (42.628,129.951,31.176)
O4: (44.982,128.978,34.286)
O2: (42.269,127.710,30.908)
C6: (43.274,130.947,31.880)
C5: (44.086,130.692,32.909)
O3': (38.812,132.312,30.778)
Image (generated by PyMOL):