Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:345:330
Extra
PDB:
ATOM 1 O3' A A 44 12.876 -94.428 37.200 1.00 76.50 O
ATOM 2 P A A 45 13.549 -95.144 35.937 1.00 72.88 P
ATOM 3 OP1 A A 45 15.012 -95.268 36.242 1.00 72.41 O
ATOM 4 OP2 A A 45 13.136 -94.385 34.726 1.00 73.25 O
ATOM 5 O5' A A 45 12.855 -96.579 35.936 1.00 73.83 O
ATOM 6 C5' A A 45 12.905 -97.399 37.091 1.00 73.64 C
ATOM 7 C4' A A 45 11.915 -98.531 37.021 1.00 74.56 C
ATOM 8 O4' A A 45 10.562 -98.008 37.004 1.00 74.65 O
ATOM 9 C3' A A 45 11.990 -99.426 35.797 1.00 75.70 C
ATOM 10 O3' A A 45 13.043-100.395 35.894 1.00 75.92 O
ATOM 11 C2' A A 45 10.577-100.021 35.768 1.00 76.44 C
ATOM 12 O2' A A 45 10.442-101.029 36.755 1.00 76.51 O
ATOM 13 C1' A A 45 9.735 -98.819 36.211 1.00 75.75 C
ATOM 14 N9 A A 45 9.250 -97.994 35.077 1.00 76.04 N
ATOM 15 C8 A A 45 9.804 -96.796 34.757 1.00 75.41 C
ATOM 16 N7 A A 45 9.250 -96.186 33.755 1.00 75.78 N
ATOM 17 C5 A A 45 8.241 -97.014 33.373 1.00 76.72 C
ATOM 18 C6 A A 45 7.307 -96.878 32.340 1.00 77.47 C
ATOM 19 N6 A A 45 7.284 -95.819 31.525 1.00 77.35 N
ATOM 20 N1 A A 45 6.399 -97.872 32.183 1.00 78.36 N
ATOM 21 C2 A A 45 6.465 -98.914 33.035 1.00 78.45 C
ATOM 22 N3 A A 45 7.313 -99.152 34.047 1.00 77.79 N
ATOM 23 C4 A A 45 8.206 -98.142 34.174 1.00 76.91 C
ATOM 24 P C A 46 13.534-101.255 34.610 1.00 69.75 P
ATOM 25 OP1 C A 46 14.519-102.267 35.100 1.00 69.80 O
ATOM 26 OP2 C A 46 13.952-100.296 33.556 1.00 69.69 O
ATOM 27 O5' C A 46 12.205-101.965 34.157 1.00 70.76 O
TER
ATOM 1 O3' G B 29 0.272 -99.452 24.027 1.00 81.45 O
ATOM 2 P U B 30 -0.490 -99.091 25.399 1.00 77.26 P
ATOM 3 OP1 U B 30 -1.870 -99.683 25.291 1.00 78.07 O
ATOM 4 OP2 U B 30 -0.366 -97.627 25.604 1.00 76.26 O
ATOM 5 O5' U B 30 0.345 -99.893 26.499 1.00 76.84 O
ATOM 6 C5' U B 30 0.211-101.296 26.596 1.00 77.65 C
ATOM 7 C4' U B 30 0.963-101.870 27.760 1.00 77.10 C
ATOM 8 O4' U B 30 2.365-101.553 27.659 1.00 76.56 O
ATOM 9 C3' U B 30 0.567-101.377 29.131 1.00 76.15 C
ATOM 10 O3' U B 30 -0.606-101.996 29.598 1.00 76.60 O
ATOM 11 C2' U B 30 1.805-101.716 29.958 1.00 75.51 C
ATOM 12 O2' U B 30 1.842-103.098 30.295 1.00 76.13 O
ATOM 13 C1' U B 30 2.922-101.441 28.955 1.00 75.59 C
ATOM 14 N1 U B 30 3.510-100.079 29.123 1.00 74.53 N
ATOM 15 C2 U B 30 4.408 -99.882 30.157 1.00 73.58 C
ATOM 16 O2 U B 30 4.744-100.750 30.968 1.00 73.53 O
ATOM 17 N3 U B 30 4.914 -98.599 30.224 1.00 72.67 N
ATOM 18 C4 U B 30 4.624 -97.524 29.404 1.00 72.61 C
ATOM 19 O4 U B 30 5.139 -96.424 29.617 1.00 71.73 O
ATOM 20 C5 U B 30 3.684 -97.836 28.369 1.00 73.63 C
ATOM 21 C6 U B 30 3.183 -99.059 28.275 1.00 74.52 C
ATOM 22 P U B 31 -1.504-101.310 30.730 1.00 95.57 P
ATOM 23 OP1 U B 31 -2.700-102.168 30.899 1.00 96.36 O
ATOM 24 OP2 U B 31 -1.686 -99.882 30.343 1.00 95.01 O
ATOM 25 O5' U B 31 -0.591-101.413 32.025 1.00 94.64 O
TER
ATOM 2 P A A 45 13.549 -95.144 35.937 1.00 72.88 P
ATOM 3 OP1 A A 45 15.012 -95.268 36.242 1.00 72.41 O
ATOM 4 OP2 A A 45 13.136 -94.385 34.726 1.00 73.25 O
ATOM 5 O5' A A 45 12.855 -96.579 35.936 1.00 73.83 O
ATOM 6 C5' A A 45 12.905 -97.399 37.091 1.00 73.64 C
ATOM 7 C4' A A 45 11.915 -98.531 37.021 1.00 74.56 C
ATOM 8 O4' A A 45 10.562 -98.008 37.004 1.00 74.65 O
ATOM 9 C3' A A 45 11.990 -99.426 35.797 1.00 75.70 C
ATOM 10 O3' A A 45 13.043-100.395 35.894 1.00 75.92 O
ATOM 11 C2' A A 45 10.577-100.021 35.768 1.00 76.44 C
ATOM 12 O2' A A 45 10.442-101.029 36.755 1.00 76.51 O
ATOM 13 C1' A A 45 9.735 -98.819 36.211 1.00 75.75 C
ATOM 14 N9 A A 45 9.250 -97.994 35.077 1.00 76.04 N
ATOM 15 C8 A A 45 9.804 -96.796 34.757 1.00 75.41 C
ATOM 16 N7 A A 45 9.250 -96.186 33.755 1.00 75.78 N
ATOM 17 C5 A A 45 8.241 -97.014 33.373 1.00 76.72 C
ATOM 18 C6 A A 45 7.307 -96.878 32.340 1.00 77.47 C
ATOM 19 N6 A A 45 7.284 -95.819 31.525 1.00 77.35 N
ATOM 20 N1 A A 45 6.399 -97.872 32.183 1.00 78.36 N
ATOM 21 C2 A A 45 6.465 -98.914 33.035 1.00 78.45 C
ATOM 22 N3 A A 45 7.313 -99.152 34.047 1.00 77.79 N
ATOM 23 C4 A A 45 8.206 -98.142 34.174 1.00 76.91 C
ATOM 24 P C A 46 13.534-101.255 34.610 1.00 69.75 P
ATOM 25 OP1 C A 46 14.519-102.267 35.100 1.00 69.80 O
ATOM 26 OP2 C A 46 13.952-100.296 33.556 1.00 69.69 O
ATOM 27 O5' C A 46 12.205-101.965 34.157 1.00 70.76 O
TER
ATOM 1 O3' G B 29 0.272 -99.452 24.027 1.00 81.45 O
ATOM 2 P U B 30 -0.490 -99.091 25.399 1.00 77.26 P
ATOM 3 OP1 U B 30 -1.870 -99.683 25.291 1.00 78.07 O
ATOM 4 OP2 U B 30 -0.366 -97.627 25.604 1.00 76.26 O
ATOM 5 O5' U B 30 0.345 -99.893 26.499 1.00 76.84 O
ATOM 6 C5' U B 30 0.211-101.296 26.596 1.00 77.65 C
ATOM 7 C4' U B 30 0.963-101.870 27.760 1.00 77.10 C
ATOM 8 O4' U B 30 2.365-101.553 27.659 1.00 76.56 O
ATOM 9 C3' U B 30 0.567-101.377 29.131 1.00 76.15 C
ATOM 10 O3' U B 30 -0.606-101.996 29.598 1.00 76.60 O
ATOM 11 C2' U B 30 1.805-101.716 29.958 1.00 75.51 C
ATOM 12 O2' U B 30 1.842-103.098 30.295 1.00 76.13 O
ATOM 13 C1' U B 30 2.922-101.441 28.955 1.00 75.59 C
ATOM 14 N1 U B 30 3.510-100.079 29.123 1.00 74.53 N
ATOM 15 C2 U B 30 4.408 -99.882 30.157 1.00 73.58 C
ATOM 16 O2 U B 30 4.744-100.750 30.968 1.00 73.53 O
ATOM 17 N3 U B 30 4.914 -98.599 30.224 1.00 72.67 N
ATOM 18 C4 U B 30 4.624 -97.524 29.404 1.00 72.61 C
ATOM 19 O4 U B 30 5.139 -96.424 29.617 1.00 71.73 O
ATOM 20 C5 U B 30 3.684 -97.836 28.369 1.00 73.63 C
ATOM 21 C6 U B 30 3.183 -99.059 28.275 1.00 74.52 C
ATOM 22 P U B 31 -1.504-101.310 30.730 1.00 95.57 P
ATOM 23 OP1 U B 31 -2.700-102.168 30.899 1.00 96.36 O
ATOM 24 OP2 U B 31 -1.686 -99.882 30.343 1.00 95.01 O
ATOM 25 O5' U B 31 -0.591-101.413 32.025 1.00 94.64 O
TER
Atoms:
OP1: (15.012,-95.268,36.242)
OP2: (13.136,-94.385,34.726)
C3': (11.990,-99.426,35.797)
C1': (9.735,-98.819,36.211)
C5': (12.905,-97.399,37.091)
O4': (10.562,-98.008,37.004)
C8: (9.804,-96.796,34.757)
O2': (10.442,-101.029,36.755)
C6: (7.307,-96.878,32.340)
C5: (8.241,-97.014,33.373)
C4: (8.206,-98.142,34.174)
P: (13.549,-95.144,35.937)
C4': (11.915,-98.531,37.021)
C2': (10.577,-100.021,35.768)
C2: (6.465,-98.914,33.035)
N1: (6.399,-97.872,32.183)
N3: (7.313,-99.152,34.047)
N6: (7.284,-95.819,31.525)
N7: (9.250,-96.186,33.755)
N9: (9.250,-97.994,35.077)
O5': (12.855,-96.579,35.936)
O3': (13.043,-100.395,35.894)
OP2: (13.136,-94.385,34.726)
C3': (11.990,-99.426,35.797)
C1': (9.735,-98.819,36.211)
C5': (12.905,-97.399,37.091)
O4': (10.562,-98.008,37.004)
C8: (9.804,-96.796,34.757)
O2': (10.442,-101.029,36.755)
C6: (7.307,-96.878,32.340)
C5: (8.241,-97.014,33.373)
C4: (8.206,-98.142,34.174)
P: (13.549,-95.144,35.937)
C4': (11.915,-98.531,37.021)
C2': (10.577,-100.021,35.768)
C2: (6.465,-98.914,33.035)
N1: (6.399,-97.872,32.183)
N3: (7.313,-99.152,34.047)
N6: (7.284,-95.819,31.525)
N7: (9.250,-96.186,33.755)
N9: (9.250,-97.994,35.077)
O5': (12.855,-96.579,35.936)
O3': (13.043,-100.395,35.894)
C4: (4.624,-97.524,29.404)
N3: (4.914,-98.599,30.224)
OP1: (-1.870,-99.683,25.291)
OP2: (-0.366,-97.627,25.604)
C2: (4.408,-99.882,30.157)
C1': (2.922,-101.441,28.955)
C3': (0.567,-101.377,29.131)
O5': (0.345,-99.893,26.499)
O4': (2.365,-101.553,27.659)
C5': (0.211,-101.296,26.596)
P: (-0.490,-99.091,25.399)
C4': (0.963,-101.870,27.760)
C2': (1.805,-101.716,29.958)
O2': (1.842,-103.098,30.295)
N1: (3.510,-100.079,29.123)
O4: (5.139,-96.424,29.617)
O2: (4.744,-100.750,30.968)
C6: (3.183,-99.059,28.275)
C5: (3.684,-97.836,28.369)
O3': (-0.606,-101.996,29.598)
N3: (4.914,-98.599,30.224)
OP1: (-1.870,-99.683,25.291)
OP2: (-0.366,-97.627,25.604)
C2: (4.408,-99.882,30.157)
C1': (2.922,-101.441,28.955)
C3': (0.567,-101.377,29.131)
O5': (0.345,-99.893,26.499)
O4': (2.365,-101.553,27.659)
C5': (0.211,-101.296,26.596)
P: (-0.490,-99.091,25.399)
C4': (0.963,-101.870,27.760)
C2': (1.805,-101.716,29.958)
O2': (1.842,-103.098,30.295)
N1: (3.510,-100.079,29.123)
O4: (5.139,-96.424,29.617)
O2: (4.744,-100.750,30.968)
C6: (3.183,-99.059,28.275)
C5: (3.684,-97.836,28.369)
O3': (-0.606,-101.996,29.598)
Image (generated by PyMOL):