ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A2710:A2664

Extra

PDB:
ATOM 1 O3' C A2709 27.618 -89.277 29.562 1.00 48.46 O
ATOM 2 P A A2710 28.185 -90.755 29.333 1.00 49.74 P
ATOM 3 OP1 A A2710 27.410 -91.368 28.213 1.00 51.49 O
ATOM 4 OP2 A A2710 28.176 -91.426 30.667 1.00 62.34 O
ATOM 5 O5' A A2710 29.676 -90.492 28.879 1.00 45.97 O
ATOM 6 C5' A A2710 29.960 -89.644 27.798 1.00 45.93 C
ATOM 7 C4' A A2710 31.420 -89.281 27.751 1.00 45.86 C
ATOM 8 O4' A A2710 31.806 -88.578 28.957 1.00 41.18 O
ATOM 9 C3' A A2710 32.405 -90.427 27.675 1.00 41.25 C
ATOM 10 O3' A A2710 32.483 -90.988 26.369 1.00 49.97 O
ATOM 11 C2' A A2710 33.702 -89.753 28.133 1.00 44.06 C
ATOM 12 O2' A A2710 34.272 -89.001 27.071 1.00 37.44 O
ATOM 13 C1' A A2710 33.183 -88.762 29.183 1.00 43.69 C
ATOM 14 N9 A A2710 33.385 -89.224 30.568 1.00 41.64 N
ATOM 15 C8 A A2710 32.440 -89.711 31.415 1.00 44.91 C
ATOM 16 N7 A A2710 32.882 -90.015 32.607 1.00 45.60 N
ATOM 17 C5 A A2710 34.216 -89.678 32.546 1.00 42.73 C
ATOM 18 C6 A A2710 35.229 -89.763 33.495 1.00 42.67 C
ATOM 19 N6 A A2710 35.046 -90.229 34.726 1.00 47.50 N
ATOM 20 N1 A A2710 36.446 -89.363 33.122 1.00 42.99 N
ATOM 21 C2 A A2710 36.626 -88.897 31.888 1.00 43.37 C
ATOM 22 N3 A A2710 35.745 -88.762 30.911 1.00 45.27 N
ATOM 23 C4 A A2710 34.542 -89.180 31.305 1.00 45.03 C
ATOM 24 P A A2711 33.282 -92.365 26.099 1.00 40.25 P
ATOM 25 OP1 A A2711 33.723 -92.345 24.679 1.00 63.99 O
ATOM 26 OP2 A A2711 32.412 -93.466 26.555 1.00 61.06 O
ATOM 27 O5' A A2711 34.547 -92.225 27.058 1.00 40.58 O
TER

ATOM 1 O3' A B2663 41.631 -87.780 39.487 1.00 55.04 O
ATOM 2 P U B2664 43.145 -87.714 38.976 1.00 55.51 P
ATOM 3 OP1 U B2664 43.767 -89.015 39.300 1.00 47.69 O
ATOM 4 OP2 U B2664 43.739 -86.471 39.536 1.00 62.16 O
ATOM 5 O5' U B2664 43.000 -87.570 37.412 1.00 49.12 O
ATOM 6 C5' U B2664 44.152 -87.494 36.606 1.00 51.75 C
ATOM 7 C4' U B2664 43.801 -87.311 35.165 1.00 46.44 C
ATOM 8 O4' U B2664 43.209 -88.524 34.653 1.00 38.56 O
ATOM 9 C3' U B2664 42.776 -86.233 34.869 1.00 45.43 C
ATOM 10 O3' U B2664 43.350 -84.946 34.775 1.00 43.58 O
ATOM 11 C2' U B2664 42.178 -86.711 33.568 1.00 44.88 C
ATOM 12 O2' U B2664 43.074 -86.457 32.492 1.00 44.95 O
ATOM 13 C1' U B2664 42.132 -88.211 33.812 1.00 43.06 C
ATOM 14 N1 U B2664 40.908 -88.596 34.503 1.00 44.93 N
ATOM 15 C2 U B2664 39.738 -88.607 33.805 1.00 45.12 C
ATOM 16 O2 U B2664 39.673 -88.315 32.627 1.00 45.33 O
ATOM 17 N3 U B2664 38.645 -88.982 34.545 1.00 51.12 N
ATOM 18 C4 U B2664 38.599 -89.327 35.875 1.00 45.53 C
ATOM 19 O4 U B2664 37.545 -89.637 36.417 1.00 41.81 O
ATOM 20 C5 U B2664 39.870 -89.295 36.508 1.00 55.11 C
ATOM 21 C6 U B2664 40.954 -88.940 35.822 1.00 50.54 C
ATOM 22 P G B2665 42.727 -83.743 35.603 1.00 43.51 P
ATOM 23 OP1 G B2665 43.814 -82.772 35.855 1.00 55.29 O
ATOM 24 OP2 G B2665 42.012 -84.344 36.765 1.00 71.27 O
ATOM 25 O5' G B2665 41.677 -83.131 34.595 1.00 34.82 O
TER

Atoms:
OP1: (27.410,-91.368,28.213)
OP2: (28.176,-91.426,30.667)
C3': (32.405,-90.427,27.675)
C1': (33.183,-88.762,29.183)
C5': (29.960,-89.644,27.798)
O4': (31.806,-88.578,28.957)
C8: (32.440,-89.711,31.415)
O2': (34.272,-89.001,27.071)
C6: (35.229,-89.763,33.495)
C5: (34.216,-89.678,32.546)
C4: (34.542,-89.180,31.305)
P: (28.185,-90.755,29.333)
C4': (31.420,-89.281,27.751)
C2': (33.702,-89.753,28.133)
C2: (36.626,-88.897,31.888)
N1: (36.446,-89.363,33.122)
N3: (35.745,-88.762,30.911)
N6: (35.046,-90.229,34.726)
N7: (32.882,-90.015,32.607)
N9: (33.385,-89.224,30.568)
O5': (29.676,-90.492,28.879)
O3': (32.483,-90.988,26.369)
C4: (38.599,-89.327,35.875)
N3: (38.645,-88.982,34.545)
OP1: (43.767,-89.015,39.300)
OP2: (43.739,-86.471,39.536)
C2: (39.738,-88.607,33.805)
C1': (42.132,-88.211,33.812)
C3': (42.776,-86.233,34.869)
O5': (43.000,-87.570,37.412)
O4': (43.209,-88.524,34.653)
C5': (44.152,-87.494,36.606)
P: (43.145,-87.714,38.976)
C4': (43.801,-87.311,35.165)
C2': (42.178,-86.711,33.568)
O2': (43.074,-86.457,32.492)
N1: (40.908,-88.596,34.503)
O4: (37.545,-89.637,36.417)
O2: (39.673,-88.315,32.627)
C6: (40.954,-88.940,35.822)
C5: (39.870,-89.295,36.508)
O3': (43.350,-84.946,34.775)
Image (generated by PyMOL):
PyMOL image
show in jmol