ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q3Z:V44:V19

Extra

PDB:
ATOM 1 O3' C A 43 4.371 -10.817 15.032 1.00 69.45 O
ATOM 2 P A A 44 5.518 -10.425 16.082 1.00 64.28 P
ATOM 3 OP1 A A 44 5.456 -11.394 17.197 1.00 71.42 O
ATOM 4 OP2 A A 44 5.441 -8.977 16.363 1.00 65.51 O
ATOM 5 O5' A A 44 6.852 -10.692 15.253 1.00 71.51 O
ATOM 6 C5' A A 44 7.260 -12.022 14.968 1.00 75.04 C
ATOM 7 C4' A A 44 8.550 -12.020 14.173 1.00 76.32 C
ATOM 8 O4' A A 44 8.353 -11.369 12.893 1.00 75.32 O
ATOM 9 C3' A A 44 9.687 -11.233 14.799 1.00 75.65 C
ATOM 10 O3' A A 44 10.315 -11.964 15.842 1.00 78.44 O
ATOM 11 C2' A A 44 10.578 -11.006 13.589 1.00 74.88 C
ATOM 12 O2' A A 44 11.295 -12.159 13.192 1.00 78.29 O
ATOM 13 C1' A A 44 9.524 -10.641 12.551 1.00 73.64 C
ATOM 14 N9 A A 44 9.180 -9.221 12.477 1.00 69.13 N
ATOM 15 C8 A A 44 8.139 -8.574 13.097 1.00 67.85 C
ATOM 16 N7 A A 44 8.063 -7.294 12.822 1.00 61.49 N
ATOM 17 C5 A A 44 9.124 -7.086 11.958 1.00 65.26 C
ATOM 18 C6 A A 44 9.591 -5.931 11.298 1.00 61.71 C
ATOM 19 N6 A A 44 9.012 -4.738 11.435 1.00 58.19 N
ATOM 20 N1 A A 44 10.678 -6.057 10.501 1.00 62.49 N
ATOM 21 C2 A A 44 11.255 -7.266 10.377 1.00 64.87 C
ATOM 22 N3 A A 44 10.904 -8.424 10.945 1.00 65.42 N
ATOM 23 C4 A A 44 9.822 -8.262 11.731 1.00 66.01 C
ATOM 24 P U A 45 10.982 -11.173 17.063 1.00 83.30 P
ATOM 25 OP1 U A 45 11.365 -12.163 18.096 1.00 80.90 O
ATOM 26 OP2 U A 45 10.110 -10.030 17.421 1.00 72.52 O
ATOM 27 O5' U A 45 12.302 -10.581 16.389 1.00 81.28 O
TER

ATOM 1 O3' A B 18 15.333 2.147 6.477 1.00 81.34 O
ATOM 2 P U B 19 14.489 1.475 5.286 1.00 81.85 P
ATOM 3 OP1 U B 19 15.100 1.879 4.000 1.00 86.82 O
ATOM 4 OP2 U B 19 13.051 1.727 5.516 1.00 74.10 O
ATOM 5 O5' U B 19 14.784 -0.075 5.521 1.00 79.42 O
ATOM 6 C5' U B 19 16.111 -0.563 5.337 1.00 83.49 C
ATOM 7 C4' U B 19 16.215 -2.030 5.706 1.00 82.92 C
ATOM 8 O4' U B 19 15.922 -2.208 7.115 1.00 78.99 O
ATOM 9 C3' U B 19 15.222 -2.943 5.004 1.00 81.92 C
ATOM 10 O3' U B 19 15.652 -3.252 3.679 1.00 81.40 O
ATOM 11 C2' U B 19 15.219 -4.139 5.948 1.00 82.59 C
ATOM 12 O2' U B 19 16.338 -4.993 5.798 1.00 75.80 O
ATOM 13 C1' U B 19 15.240 -3.436 7.305 1.00 78.17 C
ATOM 14 N1 U B 19 13.862 -3.196 7.876 1.00 73.08 N
ATOM 15 C2 U B 19 13.237 -4.229 8.552 1.00 72.65 C
ATOM 16 O2 U B 19 13.743 -5.327 8.715 1.00 75.46 O
ATOM 17 N3 U B 19 11.987 -3.934 9.041 1.00 69.70 N
ATOM 18 C4 U B 19 11.302 -2.737 8.929 1.00 70.32 C
ATOM 19 O4 U B 19 10.184 -2.628 9.426 1.00 67.12 O
ATOM 20 C5 U B 19 12.007 -1.703 8.209 1.00 68.56 C
ATOM 21 C6 U B 19 13.229 -1.970 7.723 1.00 73.36 C
ATOM 22 P G B 20 14.591 -3.399 2.482 1.00 84.94 P
ATOM 23 OP1 G B 20 15.353 -3.607 1.231 1.00 83.28 O
ATOM 24 OP2 G B 20 13.609 -2.297 2.571 1.00 70.22 O
ATOM 25 O5' G B 20 13.862 -4.776 2.835 1.00 84.69 O
TER

Atoms:
OP1: (5.456,-11.394,17.197)
OP2: (5.441,-8.977,16.363)
C3': (9.687,-11.233,14.799)
C1': (9.524,-10.641,12.551)
C5': (7.260,-12.022,14.968)
O4': (8.353,-11.369,12.893)
C8: (8.139,-8.574,13.097)
O2': (11.295,-12.159,13.192)
C6: (9.591,-5.931,11.298)
C5: (9.124,-7.086,11.958)
C4: (9.822,-8.262,11.731)
P: (5.518,-10.425,16.082)
C4': (8.550,-12.020,14.173)
C2': (10.578,-11.006,13.589)
C2: (11.255,-7.266,10.377)
N1: (10.678,-6.057,10.501)
N3: (10.904,-8.424,10.945)
N6: (9.012,-4.738,11.435)
N7: (8.063,-7.294,12.822)
N9: (9.180,-9.221,12.477)
O5': (6.852,-10.692,15.253)
O3': (10.315,-11.964,15.842)
C4: (11.302,-2.737,8.929)
N3: (11.987,-3.934,9.041)
OP1: (15.100,1.879,4.000)
OP2: (13.051,1.727,5.516)
C2: (13.237,-4.229,8.552)
C1': (15.240,-3.436,7.305)
C3': (15.222,-2.943,5.004)
O5': (14.784,-0.075,5.521)
O4': (15.922,-2.208,7.115)
C5': (16.111,-0.563,5.337)
P: (14.489,1.475,5.286)
C4': (16.215,-2.030,5.706)
C2': (15.219,-4.139,5.948)
O2': (16.338,-4.993,5.798)
N1: (13.862,-3.196,7.876)
O4: (10.184,-2.628,9.426)
O2: (13.743,-5.327,8.715)
C6: (13.229,-1.970,7.723)
C5: (12.007,-1.703,8.209)
O3': (15.652,-3.252,3.679)
Image (generated by PyMOL):
PyMOL image
show in jmol