Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GCV:B64:B54
Extra
PDB:
ATOM 1 O3' G A 63 22.549 3.834 -9.322 1.00 34.90 O
ATOM 2 P A A 64 23.583 4.172 -8.139 1.00 36.11 P
ATOM 3 OP1 A A 64 24.727 4.871 -8.782 1.00 35.78 O
ATOM 4 OP2 A A 64 23.820 2.958 -7.325 1.00 31.02 O
ATOM 5 O5' A A 64 22.797 5.217 -7.231 1.00 35.39 O
ATOM 6 C5' A A 64 22.435 6.493 -7.748 1.00 34.88 C
ATOM 7 C4' A A 64 21.687 7.286 -6.706 1.00 35.39 C
ATOM 8 O4' A A 64 20.408 6.651 -6.436 1.00 35.87 O
ATOM 9 C3' A A 64 22.344 7.333 -5.342 1.00 36.08 C
ATOM 10 O3' A A 64 23.392 8.290 -5.286 1.00 36.57 O
ATOM 11 C2' A A 64 21.166 7.693 -4.453 1.00 36.12 C
ATOM 12 O2' A A 64 20.815 9.059 -4.571 1.00 37.60 O
ATOM 13 C1' A A 64 20.072 6.819 -5.066 1.00 34.65 C
ATOM 14 N9 A A 64 20.008 5.494 -4.454 1.00 31.84 N
ATOM 15 C8 A A 64 20.685 4.365 -4.851 1.00 32.63 C
ATOM 16 N7 A A 64 20.432 3.311 -4.113 1.00 30.83 N
ATOM 17 C5 A A 64 19.529 3.775 -3.165 1.00 29.04 C
ATOM 18 C6 A A 64 18.873 3.140 -2.096 1.00 27.65 C
ATOM 19 N6 A A 64 19.029 1.852 -1.800 1.00 25.68 N
ATOM 20 N1 A A 64 18.040 3.884 -1.336 1.00 28.35 N
ATOM 21 C2 A A 64 17.881 5.177 -1.643 1.00 28.49 C
ATOM 22 N3 A A 64 18.436 5.886 -2.624 1.00 32.65 N
ATOM 23 C4 A A 64 19.261 5.118 -3.360 1.00 29.94 C
ATOM 24 P C A 65 24.619 8.054 -4.275 1.00 35.43 P
ATOM 25 OP1 C A 65 25.647 9.092 -4.524 1.00 34.97 O
ATOM 26 OP2 C A 65 24.982 6.616 -4.368 1.00 35.13 O
ATOM 27 O5' C A 65 23.968 8.306 -2.848 1.00 33.79 O
TER
ATOM 1 O3' G B 53 13.891 -0.424 6.724 1.00 35.07 O
ATOM 2 P U B 54 12.751 -0.228 5.600 1.00 37.28 P
ATOM 3 OP1 U B 54 11.440 -0.330 6.281 1.00 39.31 O
ATOM 4 OP2 U B 54 13.051 -1.121 4.457 1.00 36.93 O
ATOM 5 O5' U B 54 12.946 1.274 5.105 1.00 34.94 O
ATOM 6 C5' U B 54 12.847 2.359 6.023 1.00 34.94 C
ATOM 7 C4' U B 54 13.232 3.654 5.346 1.00 33.85 C
ATOM 8 O4' U B 54 14.655 3.646 5.041 1.00 33.65 O
ATOM 9 C3' U B 54 12.575 3.902 3.998 1.00 34.44 C
ATOM 10 O3' U B 54 11.264 4.435 4.132 1.00 35.33 O
ATOM 11 C2' U B 54 13.531 4.903 3.368 1.00 33.35 C
ATOM 12 O2' U B 54 13.364 6.213 3.867 1.00 36.51 O
ATOM 13 C1' U B 54 14.879 4.346 3.825 1.00 33.26 C
ATOM 14 N1 U B 54 15.447 3.414 2.840 1.00 29.02 N
ATOM 15 C2 U B 54 16.061 3.966 1.739 1.00 30.80 C
ATOM 16 O2 U B 54 16.125 5.170 1.556 1.00 32.62 O
ATOM 17 N3 U B 54 16.595 3.064 0.856 1.00 28.85 N
ATOM 18 C4 U B 54 16.569 1.695 0.959 1.00 31.15 C
ATOM 19 O4 U B 54 17.111 1.021 0.087 1.00 31.79 O
ATOM 20 C5 U B 54 15.900 1.193 2.121 1.00 27.53 C
ATOM 21 C6 U B 54 15.376 2.052 3.002 1.00 28.81 C
ATOM 22 P C B 55 10.156 4.121 3.008 1.00 38.37 P
ATOM 23 OP1 C B 55 8.893 4.773 3.439 1.00 38.13 O
ATOM 24 OP2 C B 55 10.171 2.654 2.742 1.00 36.25 O
ATOM 25 O5' C B 55 10.686 4.893 1.720 1.00 36.37 O
TER
ATOM 2 P A A 64 23.583 4.172 -8.139 1.00 36.11 P
ATOM 3 OP1 A A 64 24.727 4.871 -8.782 1.00 35.78 O
ATOM 4 OP2 A A 64 23.820 2.958 -7.325 1.00 31.02 O
ATOM 5 O5' A A 64 22.797 5.217 -7.231 1.00 35.39 O
ATOM 6 C5' A A 64 22.435 6.493 -7.748 1.00 34.88 C
ATOM 7 C4' A A 64 21.687 7.286 -6.706 1.00 35.39 C
ATOM 8 O4' A A 64 20.408 6.651 -6.436 1.00 35.87 O
ATOM 9 C3' A A 64 22.344 7.333 -5.342 1.00 36.08 C
ATOM 10 O3' A A 64 23.392 8.290 -5.286 1.00 36.57 O
ATOM 11 C2' A A 64 21.166 7.693 -4.453 1.00 36.12 C
ATOM 12 O2' A A 64 20.815 9.059 -4.571 1.00 37.60 O
ATOM 13 C1' A A 64 20.072 6.819 -5.066 1.00 34.65 C
ATOM 14 N9 A A 64 20.008 5.494 -4.454 1.00 31.84 N
ATOM 15 C8 A A 64 20.685 4.365 -4.851 1.00 32.63 C
ATOM 16 N7 A A 64 20.432 3.311 -4.113 1.00 30.83 N
ATOM 17 C5 A A 64 19.529 3.775 -3.165 1.00 29.04 C
ATOM 18 C6 A A 64 18.873 3.140 -2.096 1.00 27.65 C
ATOM 19 N6 A A 64 19.029 1.852 -1.800 1.00 25.68 N
ATOM 20 N1 A A 64 18.040 3.884 -1.336 1.00 28.35 N
ATOM 21 C2 A A 64 17.881 5.177 -1.643 1.00 28.49 C
ATOM 22 N3 A A 64 18.436 5.886 -2.624 1.00 32.65 N
ATOM 23 C4 A A 64 19.261 5.118 -3.360 1.00 29.94 C
ATOM 24 P C A 65 24.619 8.054 -4.275 1.00 35.43 P
ATOM 25 OP1 C A 65 25.647 9.092 -4.524 1.00 34.97 O
ATOM 26 OP2 C A 65 24.982 6.616 -4.368 1.00 35.13 O
ATOM 27 O5' C A 65 23.968 8.306 -2.848 1.00 33.79 O
TER
ATOM 1 O3' G B 53 13.891 -0.424 6.724 1.00 35.07 O
ATOM 2 P U B 54 12.751 -0.228 5.600 1.00 37.28 P
ATOM 3 OP1 U B 54 11.440 -0.330 6.281 1.00 39.31 O
ATOM 4 OP2 U B 54 13.051 -1.121 4.457 1.00 36.93 O
ATOM 5 O5' U B 54 12.946 1.274 5.105 1.00 34.94 O
ATOM 6 C5' U B 54 12.847 2.359 6.023 1.00 34.94 C
ATOM 7 C4' U B 54 13.232 3.654 5.346 1.00 33.85 C
ATOM 8 O4' U B 54 14.655 3.646 5.041 1.00 33.65 O
ATOM 9 C3' U B 54 12.575 3.902 3.998 1.00 34.44 C
ATOM 10 O3' U B 54 11.264 4.435 4.132 1.00 35.33 O
ATOM 11 C2' U B 54 13.531 4.903 3.368 1.00 33.35 C
ATOM 12 O2' U B 54 13.364 6.213 3.867 1.00 36.51 O
ATOM 13 C1' U B 54 14.879 4.346 3.825 1.00 33.26 C
ATOM 14 N1 U B 54 15.447 3.414 2.840 1.00 29.02 N
ATOM 15 C2 U B 54 16.061 3.966 1.739 1.00 30.80 C
ATOM 16 O2 U B 54 16.125 5.170 1.556 1.00 32.62 O
ATOM 17 N3 U B 54 16.595 3.064 0.856 1.00 28.85 N
ATOM 18 C4 U B 54 16.569 1.695 0.959 1.00 31.15 C
ATOM 19 O4 U B 54 17.111 1.021 0.087 1.00 31.79 O
ATOM 20 C5 U B 54 15.900 1.193 2.121 1.00 27.53 C
ATOM 21 C6 U B 54 15.376 2.052 3.002 1.00 28.81 C
ATOM 22 P C B 55 10.156 4.121 3.008 1.00 38.37 P
ATOM 23 OP1 C B 55 8.893 4.773 3.439 1.00 38.13 O
ATOM 24 OP2 C B 55 10.171 2.654 2.742 1.00 36.25 O
ATOM 25 O5' C B 55 10.686 4.893 1.720 1.00 36.37 O
TER
Atoms:
OP1: (24.727,4.871,-8.782)
OP2: (23.820,2.958,-7.325)
C3': (22.344,7.333,-5.342)
C1': (20.072,6.819,-5.066)
C5': (22.435,6.493,-7.748)
O4': (20.408,6.651,-6.436)
C8: (20.685,4.365,-4.851)
O2': (20.815,9.059,-4.571)
C6: (18.873,3.140,-2.096)
C5: (19.529,3.775,-3.165)
C4: (19.261,5.118,-3.360)
P: (23.583,4.172,-8.139)
C4': (21.687,7.286,-6.706)
C2': (21.166,7.693,-4.453)
C2: (17.881,5.177,-1.643)
N1: (18.040,3.884,-1.336)
N3: (18.436,5.886,-2.624)
N6: (19.029,1.852,-1.800)
N7: (20.432,3.311,-4.113)
N9: (20.008,5.494,-4.454)
O5': (22.797,5.217,-7.231)
O3': (23.392,8.290,-5.286)
OP2: (23.820,2.958,-7.325)
C3': (22.344,7.333,-5.342)
C1': (20.072,6.819,-5.066)
C5': (22.435,6.493,-7.748)
O4': (20.408,6.651,-6.436)
C8: (20.685,4.365,-4.851)
O2': (20.815,9.059,-4.571)
C6: (18.873,3.140,-2.096)
C5: (19.529,3.775,-3.165)
C4: (19.261,5.118,-3.360)
P: (23.583,4.172,-8.139)
C4': (21.687,7.286,-6.706)
C2': (21.166,7.693,-4.453)
C2: (17.881,5.177,-1.643)
N1: (18.040,3.884,-1.336)
N3: (18.436,5.886,-2.624)
N6: (19.029,1.852,-1.800)
N7: (20.432,3.311,-4.113)
N9: (20.008,5.494,-4.454)
O5': (22.797,5.217,-7.231)
O3': (23.392,8.290,-5.286)
C4: (16.569,1.695,0.959)
N3: (16.595,3.064,0.856)
OP1: (11.440,-0.330,6.281)
OP2: (13.051,-1.121,4.457)
C2: (16.061,3.966,1.739)
C1': (14.879,4.346,3.825)
C3': (12.575,3.902,3.998)
O5': (12.946,1.274,5.105)
O4': (14.655,3.646,5.041)
C5': (12.847,2.359,6.023)
P: (12.751,-0.228,5.600)
C4': (13.232,3.654,5.346)
C2': (13.531,4.903,3.368)
O2': (13.364,6.213,3.867)
N1: (15.447,3.414,2.840)
O4: (17.111,1.021,0.087)
O2: (16.125,5.170,1.556)
C6: (15.376,2.052,3.002)
C5: (15.900,1.193,2.121)
O3': (11.264,4.435,4.132)
N3: (16.595,3.064,0.856)
OP1: (11.440,-0.330,6.281)
OP2: (13.051,-1.121,4.457)
C2: (16.061,3.966,1.739)
C1': (14.879,4.346,3.825)
C3': (12.575,3.902,3.998)
O5': (12.946,1.274,5.105)
O4': (14.655,3.646,5.041)
C5': (12.847,2.359,6.023)
P: (12.751,-0.228,5.600)
C4': (13.232,3.654,5.346)
C2': (13.531,4.903,3.368)
O2': (13.364,6.213,3.867)
N1: (15.447,3.414,2.840)
O4: (17.111,1.021,0.087)
O2: (16.125,5.170,1.556)
C6: (15.376,2.052,3.002)
C5: (15.900,1.193,2.121)
O3': (11.264,4.435,4.132)
Image (generated by PyMOL):