Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:A60:A7
Extra
PDB:
ATOM 1 O3' U A 59 10.240 2.199 -62.857 1.00 59.70 O
ATOM 2 P A A 60 9.934 1.749 -64.361 1.00 45.36 P
ATOM 3 OP1 A A 60 11.077 2.213 -65.187 1.00 37.42 O
ATOM 4 OP2 A A 60 8.563 2.228 -64.687 1.00 37.49 O
ATOM 5 O5' A A 60 9.935 0.158 -64.264 1.00 32.30 O
ATOM 6 C5' A A 60 11.052 -0.530 -63.723 1.00 34.91 C
ATOM 7 C4' A A 60 10.735 -1.978 -63.465 1.00 42.81 C
ATOM 8 O4' A A 60 9.779 -2.093 -62.385 1.00 46.14 O
ATOM 9 C3' A A 60 10.082 -2.719 -64.609 1.00 43.60 C
ATOM 10 O3' A A 60 11.012 -3.140 -65.572 1.00 54.68 O
ATOM 11 C2' A A 60 9.369 -3.862 -63.908 1.00 41.04 C
ATOM 12 O2' A A 60 10.276 -4.886 -63.547 1.00 38.42 O
ATOM 13 C1' A A 60 8.902 -3.174 -62.639 1.00 48.00 C
ATOM 14 N9 A A 60 7.545 -2.647 -62.792 1.00 46.67 N
ATOM 15 C8 A A 60 7.156 -1.390 -63.182 1.00 43.09 C
ATOM 16 N7 A A 60 5.852 -1.248 -63.205 1.00 39.63 N
ATOM 17 C5 A A 60 5.383 -2.500 -62.817 1.00 38.83 C
ATOM 18 C6 A A 60 4.092 -3.004 -62.648 1.00 33.15 C
ATOM 19 N6 A A 60 3.009 -2.262 -62.884 1.00 41.95 N
ATOM 20 N1 A A 60 3.964 -4.293 -62.254 1.00 30.62 N
ATOM 21 C2 A A 60 5.071 -5.023 -62.041 1.00 39.03 C
ATOM 22 N3 A A 60 6.349 -4.658 -62.168 1.00 42.93 N
ATOM 23 C4 A A 60 6.419 -3.375 -62.566 1.00 42.76 C
ATOM 24 P U A 61 10.653 -3.028 -67.124 1.00 67.94 P
ATOM 25 OP1 U A 61 11.939 -2.973 -67.858 1.00 69.02 O
ATOM 26 OP2 U A 61 9.691 -1.908 -67.277 1.00 61.39 O
ATOM 27 O5' U A 61 9.920 -4.403 -67.407 1.00 36.26 O
TER
ATOM 1 O3' A B 6 -4.779 -9.382 -63.506 1.00 37.18 O
ATOM 2 P U B 7 -4.661 -9.269 -61.909 1.00 55.23 P
ATOM 3 OP1 U B 7 -5.564 -10.297 -61.329 1.00 50.19 O
ATOM 4 OP2 U B 7 -4.867 -7.835 -61.546 1.00 52.79 O
ATOM 5 O5' U B 7 -3.157 -9.674 -61.651 1.00 53.27 O
ATOM 6 C5' U B 7 -2.638 -10.876 -62.182 1.00 53.19 C
ATOM 7 C4' U B 7 -1.152 -10.948 -61.998 1.00 55.82 C
ATOM 8 O4' U B 7 -0.492 -10.067 -62.948 1.00 62.79 O
ATOM 9 C3' U B 7 -0.627 -10.468 -60.659 1.00 56.54 C
ATOM 10 O3' U B 7 -0.793 -11.413 -59.623 1.00 58.38 O
ATOM 11 C2' U B 7 0.820 -10.177 -60.987 1.00 59.24 C
ATOM 12 O2' U B 7 1.533 -11.392 -61.156 1.00 59.92 O
ATOM 13 C1' U B 7 0.666 -9.521 -62.358 1.00 59.66 C
ATOM 14 N1 U B 7 0.501 -8.046 -62.247 1.00 55.24 N
ATOM 15 C2 U B 7 1.671 -7.307 -62.208 1.00 56.65 C
ATOM 16 O2 U B 7 2.774 -7.818 -62.271 1.00 61.52 O
ATOM 17 N3 U B 7 1.528 -5.949 -62.090 1.00 50.75 N
ATOM 18 C4 U B 7 0.349 -5.252 -62.010 1.00 49.10 C
ATOM 19 O4 U B 7 0.411 -4.021 -61.914 1.00 45.12 O
ATOM 20 C5 U B 7 -0.830 -6.079 -62.046 1.00 47.61 C
ATOM 21 C6 U B 7 -0.721 -7.413 -62.155 1.00 47.07 C
ATOM 22 P A B 8 -1.215 -10.930 -58.154 1.00 48.22 P
ATOM 23 OP1 A B 8 -1.516 -12.149 -57.375 1.00 47.10 O
ATOM 24 OP2 A B 8 -2.260 -9.898 -58.313 1.00 52.56 O
ATOM 25 O5' A B 8 0.103 -10.249 -57.602 1.00 56.33 O
TER
ATOM 2 P A A 60 9.934 1.749 -64.361 1.00 45.36 P
ATOM 3 OP1 A A 60 11.077 2.213 -65.187 1.00 37.42 O
ATOM 4 OP2 A A 60 8.563 2.228 -64.687 1.00 37.49 O
ATOM 5 O5' A A 60 9.935 0.158 -64.264 1.00 32.30 O
ATOM 6 C5' A A 60 11.052 -0.530 -63.723 1.00 34.91 C
ATOM 7 C4' A A 60 10.735 -1.978 -63.465 1.00 42.81 C
ATOM 8 O4' A A 60 9.779 -2.093 -62.385 1.00 46.14 O
ATOM 9 C3' A A 60 10.082 -2.719 -64.609 1.00 43.60 C
ATOM 10 O3' A A 60 11.012 -3.140 -65.572 1.00 54.68 O
ATOM 11 C2' A A 60 9.369 -3.862 -63.908 1.00 41.04 C
ATOM 12 O2' A A 60 10.276 -4.886 -63.547 1.00 38.42 O
ATOM 13 C1' A A 60 8.902 -3.174 -62.639 1.00 48.00 C
ATOM 14 N9 A A 60 7.545 -2.647 -62.792 1.00 46.67 N
ATOM 15 C8 A A 60 7.156 -1.390 -63.182 1.00 43.09 C
ATOM 16 N7 A A 60 5.852 -1.248 -63.205 1.00 39.63 N
ATOM 17 C5 A A 60 5.383 -2.500 -62.817 1.00 38.83 C
ATOM 18 C6 A A 60 4.092 -3.004 -62.648 1.00 33.15 C
ATOM 19 N6 A A 60 3.009 -2.262 -62.884 1.00 41.95 N
ATOM 20 N1 A A 60 3.964 -4.293 -62.254 1.00 30.62 N
ATOM 21 C2 A A 60 5.071 -5.023 -62.041 1.00 39.03 C
ATOM 22 N3 A A 60 6.349 -4.658 -62.168 1.00 42.93 N
ATOM 23 C4 A A 60 6.419 -3.375 -62.566 1.00 42.76 C
ATOM 24 P U A 61 10.653 -3.028 -67.124 1.00 67.94 P
ATOM 25 OP1 U A 61 11.939 -2.973 -67.858 1.00 69.02 O
ATOM 26 OP2 U A 61 9.691 -1.908 -67.277 1.00 61.39 O
ATOM 27 O5' U A 61 9.920 -4.403 -67.407 1.00 36.26 O
TER
ATOM 1 O3' A B 6 -4.779 -9.382 -63.506 1.00 37.18 O
ATOM 2 P U B 7 -4.661 -9.269 -61.909 1.00 55.23 P
ATOM 3 OP1 U B 7 -5.564 -10.297 -61.329 1.00 50.19 O
ATOM 4 OP2 U B 7 -4.867 -7.835 -61.546 1.00 52.79 O
ATOM 5 O5' U B 7 -3.157 -9.674 -61.651 1.00 53.27 O
ATOM 6 C5' U B 7 -2.638 -10.876 -62.182 1.00 53.19 C
ATOM 7 C4' U B 7 -1.152 -10.948 -61.998 1.00 55.82 C
ATOM 8 O4' U B 7 -0.492 -10.067 -62.948 1.00 62.79 O
ATOM 9 C3' U B 7 -0.627 -10.468 -60.659 1.00 56.54 C
ATOM 10 O3' U B 7 -0.793 -11.413 -59.623 1.00 58.38 O
ATOM 11 C2' U B 7 0.820 -10.177 -60.987 1.00 59.24 C
ATOM 12 O2' U B 7 1.533 -11.392 -61.156 1.00 59.92 O
ATOM 13 C1' U B 7 0.666 -9.521 -62.358 1.00 59.66 C
ATOM 14 N1 U B 7 0.501 -8.046 -62.247 1.00 55.24 N
ATOM 15 C2 U B 7 1.671 -7.307 -62.208 1.00 56.65 C
ATOM 16 O2 U B 7 2.774 -7.818 -62.271 1.00 61.52 O
ATOM 17 N3 U B 7 1.528 -5.949 -62.090 1.00 50.75 N
ATOM 18 C4 U B 7 0.349 -5.252 -62.010 1.00 49.10 C
ATOM 19 O4 U B 7 0.411 -4.021 -61.914 1.00 45.12 O
ATOM 20 C5 U B 7 -0.830 -6.079 -62.046 1.00 47.61 C
ATOM 21 C6 U B 7 -0.721 -7.413 -62.155 1.00 47.07 C
ATOM 22 P A B 8 -1.215 -10.930 -58.154 1.00 48.22 P
ATOM 23 OP1 A B 8 -1.516 -12.149 -57.375 1.00 47.10 O
ATOM 24 OP2 A B 8 -2.260 -9.898 -58.313 1.00 52.56 O
ATOM 25 O5' A B 8 0.103 -10.249 -57.602 1.00 56.33 O
TER
Atoms:
OP1: (11.077,2.213,-65.187)
OP2: (8.563,2.228,-64.687)
C3': (10.082,-2.719,-64.609)
C1': (8.902,-3.174,-62.639)
C5': (11.052,-0.530,-63.723)
O4': (9.779,-2.093,-62.385)
C8: (7.156,-1.390,-63.182)
O2': (10.276,-4.886,-63.547)
C6: (4.092,-3.004,-62.648)
C5: (5.383,-2.500,-62.817)
C4: (6.419,-3.375,-62.566)
P: (9.934,1.749,-64.361)
C4': (10.735,-1.978,-63.465)
C2': (9.369,-3.862,-63.908)
C2: (5.071,-5.023,-62.041)
N1: (3.964,-4.293,-62.254)
N3: (6.349,-4.658,-62.168)
N6: (3.009,-2.262,-62.884)
N7: (5.852,-1.248,-63.205)
N9: (7.545,-2.647,-62.792)
O5': (9.935,0.158,-64.264)
O3': (11.012,-3.140,-65.572)
OP2: (8.563,2.228,-64.687)
C3': (10.082,-2.719,-64.609)
C1': (8.902,-3.174,-62.639)
C5': (11.052,-0.530,-63.723)
O4': (9.779,-2.093,-62.385)
C8: (7.156,-1.390,-63.182)
O2': (10.276,-4.886,-63.547)
C6: (4.092,-3.004,-62.648)
C5: (5.383,-2.500,-62.817)
C4: (6.419,-3.375,-62.566)
P: (9.934,1.749,-64.361)
C4': (10.735,-1.978,-63.465)
C2': (9.369,-3.862,-63.908)
C2: (5.071,-5.023,-62.041)
N1: (3.964,-4.293,-62.254)
N3: (6.349,-4.658,-62.168)
N6: (3.009,-2.262,-62.884)
N7: (5.852,-1.248,-63.205)
N9: (7.545,-2.647,-62.792)
O5': (9.935,0.158,-64.264)
O3': (11.012,-3.140,-65.572)
C4: (0.349,-5.252,-62.010)
N3: (1.528,-5.949,-62.090)
OP1: (-5.564,-10.297,-61.329)
OP2: (-4.867,-7.835,-61.546)
C2: (1.671,-7.307,-62.208)
C1': (0.666,-9.521,-62.358)
C3': (-0.627,-10.468,-60.659)
O5': (-3.157,-9.674,-61.651)
O4': (-0.492,-10.067,-62.948)
C5': (-2.638,-10.876,-62.182)
P: (-4.661,-9.269,-61.909)
C4': (-1.152,-10.948,-61.998)
C2': (0.820,-10.177,-60.987)
O2': (1.533,-11.392,-61.156)
N1: (0.501,-8.046,-62.247)
O4: (0.411,-4.021,-61.914)
O2: (2.774,-7.818,-62.271)
C6: (-0.721,-7.413,-62.155)
C5: (-0.830,-6.079,-62.046)
O3': (-0.793,-11.413,-59.623)
N3: (1.528,-5.949,-62.090)
OP1: (-5.564,-10.297,-61.329)
OP2: (-4.867,-7.835,-61.546)
C2: (1.671,-7.307,-62.208)
C1': (0.666,-9.521,-62.358)
C3': (-0.627,-10.468,-60.659)
O5': (-3.157,-9.674,-61.651)
O4': (-0.492,-10.067,-62.948)
C5': (-2.638,-10.876,-62.182)
P: (-4.661,-9.269,-61.909)
C4': (-1.152,-10.948,-61.998)
C2': (0.820,-10.177,-60.987)
O2': (1.533,-11.392,-61.156)
N1: (0.501,-8.046,-62.247)
O4: (0.411,-4.021,-61.914)
O2: (2.774,-7.818,-62.271)
C6: (-0.721,-7.413,-62.155)
C5: (-0.830,-6.079,-62.046)
O3': (-0.793,-11.413,-59.623)
Image (generated by PyMOL):