ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OV7:D21:D9

Extra

PDB:
ATOM 1 O3' C A 20 -16.517 12.580 -15.481 1.00 61.06 O
ATOM 2 P A A 21 -16.488 11.090 -16.033 1.00 59.64 P
ATOM 3 OP1 A A 21 -16.724 11.173 -17.496 1.00 59.75 O
ATOM 4 OP2 A A 21 -17.349 10.245 -15.165 1.00 59.40 O
ATOM 5 O5' A A 21 -14.983 10.618 -15.761 1.00 59.70 O
ATOM 6 C5' A A 21 -14.635 9.645 -14.762 1.00 58.18 C
ATOM 7 C4' A A 21 -13.337 10.080 -14.096 1.00 60.18 C
ATOM 8 O4' A A 21 -13.640 10.871 -12.920 1.00 60.86 O
ATOM 9 C3' A A 21 -12.424 8.988 -13.564 1.00 61.49 C
ATOM 10 O3' A A 21 -11.583 8.479 -14.578 1.00 63.94 O
ATOM 11 C2' A A 21 -11.622 9.719 -12.491 1.00 64.05 C
ATOM 12 O2' A A 21 -10.547 10.496 -12.982 1.00 66.36 O
ATOM 13 C1' A A 21 -12.707 10.598 -11.892 1.00 61.15 C
ATOM 14 N9 A A 21 -13.408 9.932 -10.802 1.00 61.21 N
ATOM 15 C8 A A 21 -14.720 9.534 -10.750 1.00 59.03 C
ATOM 16 N7 A A 21 -15.050 8.956 -9.617 1.00 62.08 N
ATOM 17 C5 A A 21 -13.874 8.979 -8.876 1.00 66.04 C
ATOM 18 C6 A A 21 -13.537 8.531 -7.580 1.00 71.42 C
ATOM 19 N6 A A 21 -14.386 7.936 -6.750 1.00 74.71 N
ATOM 20 N1 A A 21 -12.275 8.719 -7.157 1.00 75.79 N
ATOM 21 C2 A A 21 -11.393 9.312 -7.972 1.00 74.40 C
ATOM 22 N3 A A 21 -11.576 9.783 -9.203 1.00 68.99 N
ATOM 23 C4 A A 21 -12.851 9.581 -9.596 1.00 65.52 C
ATOM 24 P U A 22 -11.371 6.899 -14.607 1.00 64.95 P
ATOM 25 OP1 U A 22 -10.635 6.503 -15.831 1.00 65.33 O
ATOM 26 OP2 U A 22 -12.694 6.289 -14.324 1.00 61.92 O
ATOM 27 O5' U A 22 -10.422 6.689 -13.332 1.00 71.26 O
TER

ATOM 1 O3' A B 8 -9.441 5.213 2.009 1.00176.71 O
ATOM 2 P U B 9 -10.618 6.265 2.259 1.00169.97 P
ATOM 3 OP1 U B 9 -11.060 6.079 3.660 1.00182.78 O
ATOM 4 OP2 U B 9 -11.609 6.139 1.157 1.00157.76 O
ATOM 5 O5' U B 9 -9.877 7.683 2.133 1.00164.43 O
ATOM 6 C5' U B 9 -9.873 8.407 0.912 1.00149.28 C
ATOM 7 C4' U B 9 -8.582 8.189 0.141 1.00147.76 C
ATOM 8 O4' U B 9 -8.618 6.925 -0.570 1.00145.85 O
ATOM 9 C3' U B 9 -8.356 9.203 -0.966 1.00137.25 C
ATOM 10 O3' U B 9 -7.624 10.291 -0.472 1.00140.22 O
ATOM 11 C2' U B 9 -7.613 8.411 -2.034 1.00135.60 C
ATOM 12 O2' U B 9 -6.267 8.138 -1.695 1.00146.77 O
ATOM 13 C1' U B 9 -8.430 7.131 -1.966 1.00134.80 C
ATOM 14 N1 U B 9 -9.775 7.165 -2.661 1.00123.68 N
ATOM 15 C2 U B 9 -9.924 7.675 -3.946 1.00113.26 C
ATOM 16 O2 U B 9 -9.025 8.135 -4.632 1.00111.75 O
ATOM 17 N3 U B 9 -11.211 7.625 -4.418 1.00106.00 N
ATOM 18 C4 U B 9 -12.331 7.137 -3.768 1.00108.26 C
ATOM 19 O4 U B 9 -13.417 7.159 -4.326 1.00102.84 O
ATOM 20 C5 U B 9 -12.106 6.625 -2.447 1.00118.81 C
ATOM 21 C6 U B 9 -10.864 6.662 -1.965 1.00125.90 C
ATOM 22 P G B 10 -8.450 11.639 -0.285 1.00133.52 P
ATOM 23 OP1 G B 10 -8.000 12.260 0.982 1.00143.52 O
ATOM 24 OP2 G B 10 -9.887 11.331 -0.493 1.00126.84 O
ATOM 25 O5' G B 10 -8.004 12.556 -1.516 1.00124.91 O
TER

Atoms:
OP1: (-16.724,11.173,-17.496)
OP2: (-17.349,10.245,-15.165)
C3': (-12.424,8.988,-13.564)
C1': (-12.707,10.598,-11.892)
C5': (-14.635,9.645,-14.762)
O4': (-13.640,10.871,-12.920)
C8: (-14.720,9.534,-10.750)
O2': (-10.547,10.496,-12.982)
C6: (-13.537,8.531,-7.580)
C5: (-13.874,8.979,-8.876)
C4: (-12.851,9.581,-9.596)
P: (-16.488,11.090,-16.033)
C4': (-13.337,10.080,-14.096)
C2': (-11.622,9.719,-12.491)
C2: (-11.393,9.312,-7.972)
N1: (-12.275,8.719,-7.157)
N3: (-11.576,9.783,-9.203)
N6: (-14.386,7.936,-6.750)
N7: (-15.050,8.956,-9.617)
N9: (-13.408,9.932,-10.802)
O5': (-14.983,10.618,-15.761)
O3': (-11.583,8.479,-14.578)
C4: (-12.331,7.137,-3.768)
N3: (-11.211,7.625,-4.418)
OP1: (-11.060,6.079,3.660)
OP2: (-11.609,6.139,1.157)
C2: (-9.924,7.675,-3.946)
C1': (-8.430,7.131,-1.966)
C3': (-8.356,9.203,-0.966)
O5': (-9.877,7.683,2.133)
O4': (-8.618,6.925,-0.570)
C5': (-9.873,8.407,0.912)
P: (-10.618,6.265,2.259)
C4': (-8.582,8.189,0.141)
C2': (-7.613,8.411,-2.034)
O2': (-6.267,8.138,-1.695)
N1: (-9.775,7.165,-2.661)
O4: (-13.417,7.159,-4.326)
O2: (-9.025,8.135,-4.632)
C6: (-10.864,6.662,-1.965)
C5: (-12.106,6.625,-2.447)
O3': (-7.624,10.291,-0.472)
Image (generated by PyMOL):
PyMOL image
show in jmol