ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2YIE:X44:X33

Extra

PDB:
ATOM 1 O3' C A 43 15.677 -52.029 -64.110 1.00 97.81 O
ATOM 2 P A A 44 14.764 -53.282 -63.704 1.00 94.92 P
ATOM 3 OP1 A A 44 15.550 -54.512 -63.996 1.00 88.59 O
ATOM 4 OP2 A A 44 14.288 -53.047 -62.314 1.00100.86 O
ATOM 5 O5' A A 44 13.553 -53.160 -64.721 1.00 94.59 O
ATOM 6 C5' A A 44 12.339 -53.843 -64.492 1.00 89.32 C
ATOM 7 C4' A A 44 11.243 -53.297 -65.359 1.00 93.87 C
ATOM 8 O4' A A 44 11.817 -52.683 -66.546 1.00 98.79 O
ATOM 9 C3' A A 44 10.272 -54.321 -65.910 1.00 89.19 C
ATOM 10 O3' A A 44 9.277 -54.702 -64.978 1.00 86.59 O
ATOM 11 C2' A A 44 9.736 -53.627 -67.151 1.00 94.59 C
ATOM 12 O2' A A 44 8.813 -52.607 -66.799 1.00102.07 O
ATOM 13 C1' A A 44 11.011 -52.966 -67.669 1.00 98.18 C
ATOM 14 N9 A A 44 11.764 -53.872 -68.555 1.00 95.57 N
ATOM 15 C8 A A 44 12.985 -54.459 -68.327 1.00 90.35 C
ATOM 16 N7 A A 44 13.395 -55.235 -69.304 1.00 86.41 N
ATOM 17 C5 A A 44 12.370 -55.159 -70.237 1.00 85.56 C
ATOM 18 C6 A A 44 12.186 -55.751 -71.501 1.00 78.80 C
ATOM 19 N6 A A 44 13.056 -56.579 -72.086 1.00 72.00 N
ATOM 20 N1 A A 44 11.046 -55.456 -72.162 1.00 79.63 N
ATOM 21 C2 A A 44 10.159 -54.631 -71.591 1.00 85.54 C
ATOM 22 N3 A A 44 10.218 -54.015 -70.416 1.00 91.18 N
ATOM 23 C4 A A 44 11.361 -54.324 -69.784 1.00 91.31 C
ATOM 24 P C A 45 9.010 -56.262 -64.689 1.00 95.86 P
ATOM 25 OP1 C A 45 8.241 -56.348 -63.420 1.00 99.35 O
ATOM 26 OP2 C A 45 10.319 -56.960 -64.780 1.00 93.36 O
ATOM 27 O5' C A 45 8.085 -56.682 -65.912 1.00 90.60 O
TER

ATOM 1 O3' G B 32 8.804 -59.805 -81.335 1.00 70.55 O
ATOM 2 P U B 33 9.052 -58.230 -81.466 1.00 67.69 P
ATOM 3 OP1 U B 33 8.337 -57.778 -82.690 1.00 69.72 O
ATOM 4 OP2 U B 33 10.521 -58.008 -81.370 1.00 59.89 O
ATOM 5 O5' U B 33 8.329 -57.654 -80.168 1.00 71.35 O
ATOM 6 C5' U B 33 6.936 -57.842 -79.967 1.00 75.17 C
ATOM 7 C4' U B 33 6.477 -57.236 -78.665 1.00 78.69 C
ATOM 8 O4' U B 33 6.990 -58.008 -77.551 1.00 75.50 O
ATOM 9 C3' U B 33 6.956 -55.826 -78.380 1.00 82.39 C
ATOM 10 O3' U B 33 6.205 -54.844 -79.059 1.00 87.18 O
ATOM 11 C2' U B 33 6.845 -55.742 -76.865 1.00 83.97 C
ATOM 12 O2' U B 33 5.498 -55.537 -76.473 1.00 91.15 O
ATOM 13 C1' U B 33 7.253 -57.156 -76.457 1.00 78.52 C
ATOM 14 N1 U B 33 8.689 -57.243 -76.130 1.00 73.43 N
ATOM 15 C2 U B 33 9.074 -56.812 -74.877 1.00 76.99 C
ATOM 16 O2 U B 33 8.279 -56.378 -74.059 1.00 83.29 O
ATOM 17 N3 U B 33 10.419 -56.908 -74.620 1.00 75.40 N
ATOM 18 C4 U B 33 11.396 -57.382 -75.469 1.00 70.22 C
ATOM 19 O4 U B 33 12.569 -57.405 -75.088 1.00 70.89 O
ATOM 20 C5 U B 33 10.914 -57.807 -76.747 1.00 67.05 C
ATOM 21 C6 U B 33 9.610 -57.728 -77.029 1.00 68.88 C
ATOM 22 P G B 34 6.909 -53.486 -79.545 1.00 68.56 P
ATOM 23 OP1 G B 34 6.004 -52.860 -80.543 1.00 77.85 O
ATOM 24 OP2 G B 34 8.291 -53.830 -79.953 1.00 64.85 O
ATOM 25 O5' G B 34 6.940 -52.610 -78.217 1.00 67.07 O
TER

Atoms:
OP1: (15.550,-54.512,-63.996)
OP2: (14.288,-53.047,-62.314)
C3': (10.272,-54.321,-65.910)
C1': (11.011,-52.966,-67.669)
C5': (12.339,-53.843,-64.492)
O4': (11.817,-52.683,-66.546)
C8: (12.985,-54.459,-68.327)
O2': (8.813,-52.607,-66.799)
C6: (12.186,-55.751,-71.501)
C5: (12.370,-55.159,-70.237)
C4: (11.361,-54.324,-69.784)
P: (14.764,-53.282,-63.704)
C4': (11.243,-53.297,-65.359)
C2': (9.736,-53.627,-67.151)
C2: (10.159,-54.631,-71.591)
N1: (11.046,-55.456,-72.162)
N3: (10.218,-54.015,-70.416)
N6: (13.056,-56.579,-72.086)
N7: (13.395,-55.235,-69.304)
N9: (11.764,-53.872,-68.555)
O5': (13.553,-53.160,-64.721)
O3': (9.277,-54.702,-64.978)
C4: (11.396,-57.382,-75.469)
N3: (10.419,-56.908,-74.620)
OP1: (8.337,-57.778,-82.690)
OP2: (10.521,-58.008,-81.370)
C2: (9.074,-56.812,-74.877)
C1': (7.253,-57.156,-76.457)
C3': (6.956,-55.826,-78.380)
O5': (8.329,-57.654,-80.168)
O4': (6.990,-58.008,-77.551)
C5': (6.936,-57.842,-79.967)
P: (9.052,-58.230,-81.466)
C4': (6.477,-57.236,-78.665)
C2': (6.845,-55.742,-76.865)
O2': (5.498,-55.537,-76.473)
N1: (8.689,-57.243,-76.130)
O4: (12.569,-57.405,-75.088)
O2: (8.279,-56.378,-74.059)
C6: (9.610,-57.728,-77.029)
C5: (10.914,-57.807,-76.747)
O3': (6.205,-54.844,-79.059)
Image (generated by PyMOL):
PyMOL image
show in jmol