ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M90:A2041:A2491

Extra

PDB:
ATOM 1 O3' G A2040 51.914 127.409 105.900 1.00 28.79 O
ATOM 2 P A A2041 52.433 127.309 104.384 1.00 28.72 P
ATOM 3 OP1 A A2041 52.890 125.909 104.215 1.00 27.74 O
ATOM 4 OP2 A A2041 53.373 128.427 104.107 1.00 26.06 O
ATOM 5 O5' A A2041 51.114 127.508 103.513 1.00 27.70 O
ATOM 6 C5' A A2041 49.964 126.655 103.691 1.00 24.81 C
ATOM 7 C4' A A2041 48.770 127.213 102.945 1.00 25.57 C
ATOM 8 O4' A A2041 48.527 128.584 103.368 1.00 24.95 O
ATOM 9 C3' A A2041 48.877 127.324 101.430 1.00 25.42 C
ATOM 10 O3' A A2041 48.592 126.093 100.786 1.00 25.34 O
ATOM 11 C2' A A2041 47.804 128.357 101.109 1.00 25.19 C
ATOM 12 O2' A A2041 46.506 127.794 101.102 1.00 25.58 O
ATOM 13 C1' A A2041 47.931 129.310 102.301 1.00 25.95 C
ATOM 14 N9 A A2041 48.715 130.521 102.046 1.00 27.17 N
ATOM 15 C8 A A2041 50.008 130.792 102.413 1.00 28.64 C
ATOM 16 N7 A A2041 50.419 131.985 102.064 1.00 29.65 N
ATOM 17 C5 A A2041 49.325 132.535 101.411 1.00 29.54 C
ATOM 18 C6 A A2041 49.119 133.779 100.794 1.00 29.28 C
ATOM 19 N6 A A2041 50.046 134.742 100.730 1.00 28.17 N
ATOM 20 N1 A A2041 47.913 134.005 100.232 1.00 29.04 N
ATOM 21 C2 A A2041 46.991 133.047 100.288 1.00 26.95 C
ATOM 22 N3 A A2041 47.065 131.844 100.835 1.00 29.14 N
ATOM 23 C4 A A2041 48.272 131.644 101.388 1.00 28.19 C
ATOM 24 P A A2042 49.333 125.722 99.413 1.00 25.61 P
ATOM 25 OP1 A A2042 49.336 126.901 98.514 1.00 26.26 O
ATOM 26 OP2 A A2042 48.753 124.452 98.943 1.00 24.92 O
ATOM 27 O5' A A2042 50.830 125.427 99.864 1.00 27.10 O
TER

ATOM 1 O3' A B2490 47.767 142.028 99.429 1.00 35.25 O
ATOM 2 P U B2491 46.585 142.854 98.709 1.00 37.13 P
ATOM 3 OP1 U B2491 47.134 143.637 97.565 1.00 36.26 O
ATOM 4 OP2 U B2491 45.796 143.543 99.749 1.00 32.99 O
ATOM 5 O5' U B2491 45.702 141.658 98.124 1.00 36.03 O
ATOM 6 C5' U B2491 44.547 141.878 97.291 1.00 34.71 C
ATOM 7 C4' U B2491 43.794 140.577 97.104 1.00 32.38 C
ATOM 8 O4' U B2491 44.598 139.629 96.348 1.00 33.28 O
ATOM 9 C3' U B2491 43.474 139.869 98.404 1.00 31.96 C
ATOM 10 O3' U B2491 42.258 140.369 98.936 1.00 31.12 O
ATOM 11 C2' U B2491 43.412 138.405 97.988 1.00 32.20 C
ATOM 12 O2' U B2491 42.204 138.041 97.367 1.00 32.33 O
ATOM 13 C1' U B2491 44.517 138.339 96.936 1.00 31.51 C
ATOM 14 N1 U B2491 45.845 137.994 97.479 1.00 33.13 N
ATOM 15 C2 U B2491 46.019 136.762 98.115 1.00 32.38 C
ATOM 16 O2 U B2491 45.130 135.949 98.255 1.00 32.84 O
ATOM 17 N3 U B2491 47.286 136.525 98.584 1.00 31.35 N
ATOM 18 C4 U B2491 48.379 137.365 98.496 1.00 31.93 C
ATOM 19 O4 U B2491 49.460 137.010 98.973 1.00 30.95 O
ATOM 20 C5 U B2491 48.124 138.605 97.836 1.00 32.93 C
ATOM 21 C6 U B2491 46.902 138.871 97.361 1.00 33.34 C
ATOM 22 P C B2492 42.032 140.408 100.526 1.00 34.18 P
ATOM 23 OP1 C B2492 40.703 141.031 100.784 1.00 33.13 O
ATOM 24 OP2 C B2492 43.246 140.989 101.160 1.00 33.38 O
ATOM 25 O5' C B2492 41.931 138.870 100.926 1.00 32.48 O
TER

Atoms:
OP1: (52.890,125.909,104.215)
OP2: (53.373,128.427,104.107)
C3': (48.877,127.324,101.430)
C1': (47.931,129.310,102.301)
C5': (49.964,126.655,103.691)
O4': (48.527,128.584,103.368)
C8: (50.008,130.792,102.413)
O2': (46.506,127.794,101.102)
C6: (49.119,133.779,100.794)
C5: (49.325,132.535,101.411)
C4: (48.272,131.644,101.388)
P: (52.433,127.309,104.384)
C4': (48.770,127.213,102.945)
C2': (47.804,128.357,101.109)
C2: (46.991,133.047,100.288)
N1: (47.913,134.005,100.232)
N3: (47.065,131.844,100.835)
N6: (50.046,134.742,100.730)
N7: (50.419,131.985,102.064)
N9: (48.715,130.521,102.046)
O5': (51.114,127.508,103.513)
O3': (48.592,126.093,100.786)
C4: (48.379,137.365,98.496)
N3: (47.286,136.525,98.584)
OP1: (47.134,143.637,97.565)
OP2: (45.796,143.543,99.749)
C2: (46.019,136.762,98.115)
C1': (44.517,138.339,96.936)
C3': (43.474,139.869,98.404)
O5': (45.702,141.658,98.124)
O4': (44.598,139.629,96.348)
C5': (44.547,141.878,97.291)
P: (46.585,142.854,98.709)
C4': (43.794,140.577,97.104)
C2': (43.412,138.405,97.988)
O2': (42.204,138.041,97.367)
N1: (45.845,137.994,97.479)
O4: (49.460,137.010,98.973)
O2: (45.130,135.949,98.255)
C6: (46.902,138.871,97.361)
C5: (48.124,138.605,97.836)
O3': (42.258,140.369,98.936)
Image (generated by PyMOL):
PyMOL image
show in jmol