Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1346:A1372
Extra
PDB:
ATOM 1 O3' U A1345 -28.102 -24.226 39.622 1.00 0.01 O
ATOM 2 P A A1346 -29.580 -24.807 39.597 1.00 0.01 P
ATOM 3 OP1 A A1346 -30.482 -23.747 40.045 1.00 0.01 O
ATOM 4 OP2 A A1346 -29.551 -26.045 40.352 1.00 0.01 O
ATOM 5 O5' A A1346 -29.812 -25.097 38.059 1.00 0.01 O
ATOM 6 C5' A A1346 -29.515 -24.126 37.084 1.00 0.01 C
ATOM 7 C4' A A1346 -30.306 -24.348 35.810 1.00 0.01 C
ATOM 8 O4' A A1346 -29.614 -25.257 34.933 1.00 0.01 O
ATOM 9 C3' A A1346 -31.679 -24.960 35.960 1.00 0.01 C
ATOM 10 O3' A A1346 -32.629 -24.009 36.299 1.00 0.01 O
ATOM 11 C2' A A1346 -31.930 -25.517 34.594 1.00 0.01 C
ATOM 12 O2' A A1346 -32.308 -24.469 33.736 1.00 0.01 O
ATOM 13 C1' A A1346 -30.547 -25.998 34.190 1.00 0.01 C
ATOM 14 N9 A A1346 -30.341 -27.423 34.485 1.00 0.01 N
ATOM 15 C8 A A1346 -29.975 -27.903 35.693 1.00 0.01 C
ATOM 16 N7 A A1346 -29.822 -29.191 35.731 1.00 0.01 N
ATOM 17 C5 A A1346 -30.108 -29.600 34.462 1.00 0.01 C
ATOM 18 C6 A A1346 -30.104 -30.857 33.912 1.00 0.01 C
ATOM 19 N6 A A1346 -29.803 -31.914 34.617 1.00 0.01 N
ATOM 20 N1 A A1346 -30.386 -31.000 32.641 1.00 0.01 N
ATOM 21 C2 A A1346 -30.672 -29.897 31.978 1.00 0.01 C
ATOM 22 N3 A A1346 -30.729 -28.616 32.380 1.00 0.01 N
ATOM 23 C4 A A1346 -30.419 -28.530 33.673 1.00 0.01 C
ATOM 24 P A A1347 -33.897 -24.419 37.144 1.00 0.01 P
ATOM 25 OP1 A A1347 -34.654 -23.180 37.422 1.00 0.01 O
ATOM 26 OP2 A A1347 -33.405 -25.237 38.278 1.00 0.01 O
ATOM 27 O5' A A1347 -34.702 -25.325 36.150 1.00 0.01 O
TER
ATOM 1 O3' A B1371 -24.505 -36.004 30.986 1.00 0.01 O
ATOM 2 P U B1372 -25.412 -36.203 29.659 1.00 0.01 P
ATOM 3 OP1 U B1372 -26.800 -36.045 30.064 1.00 0.01 O
ATOM 4 OP2 U B1372 -24.996 -37.492 29.026 1.00 0.01 O
ATOM 5 O5' U B1372 -25.000 -34.997 28.718 1.00 0.01 O
ATOM 6 C5' U B1372 -25.277 -35.044 27.323 1.00 0.01 C
ATOM 7 C4' U B1372 -26.203 -33.935 26.893 1.00 0.01 C
ATOM 8 O4' U B1372 -27.559 -34.328 27.133 1.00 0.01 O
ATOM 9 C3' U B1372 -26.041 -32.624 27.628 1.00 0.01 C
ATOM 10 O3' U B1372 -25.050 -31.792 27.040 1.00 0.01 O
ATOM 11 C2' U B1372 -27.439 -32.010 27.603 1.00 0.01 C
ATOM 12 O2' U B1372 -27.639 -31.238 26.442 1.00 0.01 O
ATOM 13 C1' U B1372 -28.339 -33.226 27.524 1.00 0.01 C
ATOM 14 N1 U B1372 -28.983 -33.538 28.811 1.00 0.01 N
ATOM 15 C2 U B1372 -29.617 -32.556 29.534 1.00 0.01 C
ATOM 16 O2 U B1372 -29.675 -31.388 29.190 1.00 0.01 O
ATOM 17 N3 U B1372 -30.151 -33.026 30.711 1.00 0.01 N
ATOM 18 C4 U B1372 -30.136 -34.312 31.206 1.00 0.01 C
ATOM 19 O4 U B1372 -30.655 -34.586 32.275 1.00 0.01 O
ATOM 20 C5 U B1372 -29.488 -35.246 30.377 1.00 0.01 C
ATOM 21 C6 U B1372 -28.955 -34.834 29.241 1.00 0.01 C
ATOM 22 P G B1373 -23.486 -32.025 27.347 1.00 0.01 P
ATOM 23 OP1 G B1373 -22.910 -32.822 26.210 1.00 0.01 O
ATOM 24 OP2 G B1373 -23.390 -32.569 28.706 1.00 0.01 O
ATOM 25 O5' G B1373 -22.909 -30.545 27.331 1.00 0.01 O
TER
ATOM 2 P A A1346 -29.580 -24.807 39.597 1.00 0.01 P
ATOM 3 OP1 A A1346 -30.482 -23.747 40.045 1.00 0.01 O
ATOM 4 OP2 A A1346 -29.551 -26.045 40.352 1.00 0.01 O
ATOM 5 O5' A A1346 -29.812 -25.097 38.059 1.00 0.01 O
ATOM 6 C5' A A1346 -29.515 -24.126 37.084 1.00 0.01 C
ATOM 7 C4' A A1346 -30.306 -24.348 35.810 1.00 0.01 C
ATOM 8 O4' A A1346 -29.614 -25.257 34.933 1.00 0.01 O
ATOM 9 C3' A A1346 -31.679 -24.960 35.960 1.00 0.01 C
ATOM 10 O3' A A1346 -32.629 -24.009 36.299 1.00 0.01 O
ATOM 11 C2' A A1346 -31.930 -25.517 34.594 1.00 0.01 C
ATOM 12 O2' A A1346 -32.308 -24.469 33.736 1.00 0.01 O
ATOM 13 C1' A A1346 -30.547 -25.998 34.190 1.00 0.01 C
ATOM 14 N9 A A1346 -30.341 -27.423 34.485 1.00 0.01 N
ATOM 15 C8 A A1346 -29.975 -27.903 35.693 1.00 0.01 C
ATOM 16 N7 A A1346 -29.822 -29.191 35.731 1.00 0.01 N
ATOM 17 C5 A A1346 -30.108 -29.600 34.462 1.00 0.01 C
ATOM 18 C6 A A1346 -30.104 -30.857 33.912 1.00 0.01 C
ATOM 19 N6 A A1346 -29.803 -31.914 34.617 1.00 0.01 N
ATOM 20 N1 A A1346 -30.386 -31.000 32.641 1.00 0.01 N
ATOM 21 C2 A A1346 -30.672 -29.897 31.978 1.00 0.01 C
ATOM 22 N3 A A1346 -30.729 -28.616 32.380 1.00 0.01 N
ATOM 23 C4 A A1346 -30.419 -28.530 33.673 1.00 0.01 C
ATOM 24 P A A1347 -33.897 -24.419 37.144 1.00 0.01 P
ATOM 25 OP1 A A1347 -34.654 -23.180 37.422 1.00 0.01 O
ATOM 26 OP2 A A1347 -33.405 -25.237 38.278 1.00 0.01 O
ATOM 27 O5' A A1347 -34.702 -25.325 36.150 1.00 0.01 O
TER
ATOM 1 O3' A B1371 -24.505 -36.004 30.986 1.00 0.01 O
ATOM 2 P U B1372 -25.412 -36.203 29.659 1.00 0.01 P
ATOM 3 OP1 U B1372 -26.800 -36.045 30.064 1.00 0.01 O
ATOM 4 OP2 U B1372 -24.996 -37.492 29.026 1.00 0.01 O
ATOM 5 O5' U B1372 -25.000 -34.997 28.718 1.00 0.01 O
ATOM 6 C5' U B1372 -25.277 -35.044 27.323 1.00 0.01 C
ATOM 7 C4' U B1372 -26.203 -33.935 26.893 1.00 0.01 C
ATOM 8 O4' U B1372 -27.559 -34.328 27.133 1.00 0.01 O
ATOM 9 C3' U B1372 -26.041 -32.624 27.628 1.00 0.01 C
ATOM 10 O3' U B1372 -25.050 -31.792 27.040 1.00 0.01 O
ATOM 11 C2' U B1372 -27.439 -32.010 27.603 1.00 0.01 C
ATOM 12 O2' U B1372 -27.639 -31.238 26.442 1.00 0.01 O
ATOM 13 C1' U B1372 -28.339 -33.226 27.524 1.00 0.01 C
ATOM 14 N1 U B1372 -28.983 -33.538 28.811 1.00 0.01 N
ATOM 15 C2 U B1372 -29.617 -32.556 29.534 1.00 0.01 C
ATOM 16 O2 U B1372 -29.675 -31.388 29.190 1.00 0.01 O
ATOM 17 N3 U B1372 -30.151 -33.026 30.711 1.00 0.01 N
ATOM 18 C4 U B1372 -30.136 -34.312 31.206 1.00 0.01 C
ATOM 19 O4 U B1372 -30.655 -34.586 32.275 1.00 0.01 O
ATOM 20 C5 U B1372 -29.488 -35.246 30.377 1.00 0.01 C
ATOM 21 C6 U B1372 -28.955 -34.834 29.241 1.00 0.01 C
ATOM 22 P G B1373 -23.486 -32.025 27.347 1.00 0.01 P
ATOM 23 OP1 G B1373 -22.910 -32.822 26.210 1.00 0.01 O
ATOM 24 OP2 G B1373 -23.390 -32.569 28.706 1.00 0.01 O
ATOM 25 O5' G B1373 -22.909 -30.545 27.331 1.00 0.01 O
TER
Atoms:
OP1: (-30.482,-23.747,40.045)
OP2: (-29.551,-26.045,40.352)
C3': (-31.679,-24.960,35.960)
C1': (-30.547,-25.998,34.190)
C5': (-29.515,-24.126,37.084)
O4': (-29.614,-25.257,34.933)
C8: (-29.975,-27.903,35.693)
O2': (-32.308,-24.469,33.736)
C6: (-30.104,-30.857,33.912)
C5: (-30.108,-29.600,34.462)
C4: (-30.419,-28.530,33.673)
P: (-29.580,-24.807,39.597)
C4': (-30.306,-24.348,35.810)
C2': (-31.930,-25.517,34.594)
C2: (-30.672,-29.897,31.978)
N1: (-30.386,-31.000,32.641)
N3: (-30.729,-28.616,32.380)
N6: (-29.803,-31.914,34.617)
N7: (-29.822,-29.191,35.731)
N9: (-30.341,-27.423,34.485)
O5': (-29.812,-25.097,38.059)
O3': (-32.629,-24.009,36.299)
OP2: (-29.551,-26.045,40.352)
C3': (-31.679,-24.960,35.960)
C1': (-30.547,-25.998,34.190)
C5': (-29.515,-24.126,37.084)
O4': (-29.614,-25.257,34.933)
C8: (-29.975,-27.903,35.693)
O2': (-32.308,-24.469,33.736)
C6: (-30.104,-30.857,33.912)
C5: (-30.108,-29.600,34.462)
C4: (-30.419,-28.530,33.673)
P: (-29.580,-24.807,39.597)
C4': (-30.306,-24.348,35.810)
C2': (-31.930,-25.517,34.594)
C2: (-30.672,-29.897,31.978)
N1: (-30.386,-31.000,32.641)
N3: (-30.729,-28.616,32.380)
N6: (-29.803,-31.914,34.617)
N7: (-29.822,-29.191,35.731)
N9: (-30.341,-27.423,34.485)
O5': (-29.812,-25.097,38.059)
O3': (-32.629,-24.009,36.299)
C4: (-30.136,-34.312,31.206)
N3: (-30.151,-33.026,30.711)
OP1: (-26.800,-36.045,30.064)
OP2: (-24.996,-37.492,29.026)
C2: (-29.617,-32.556,29.534)
C1': (-28.339,-33.226,27.524)
C3': (-26.041,-32.624,27.628)
O5': (-25.000,-34.997,28.718)
O4': (-27.559,-34.328,27.133)
C5': (-25.277,-35.044,27.323)
P: (-25.412,-36.203,29.659)
C4': (-26.203,-33.935,26.893)
C2': (-27.439,-32.010,27.603)
O2': (-27.639,-31.238,26.442)
N1: (-28.983,-33.538,28.811)
O4: (-30.655,-34.586,32.275)
O2: (-29.675,-31.388,29.190)
C6: (-28.955,-34.834,29.241)
C5: (-29.488,-35.246,30.377)
O3': (-25.050,-31.792,27.040)
N3: (-30.151,-33.026,30.711)
OP1: (-26.800,-36.045,30.064)
OP2: (-24.996,-37.492,29.026)
C2: (-29.617,-32.556,29.534)
C1': (-28.339,-33.226,27.524)
C3': (-26.041,-32.624,27.628)
O5': (-25.000,-34.997,28.718)
O4': (-27.559,-34.328,27.133)
C5': (-25.277,-35.044,27.323)
P: (-25.412,-36.203,29.659)
C4': (-26.203,-33.935,26.893)
C2': (-27.439,-32.010,27.603)
O2': (-27.639,-31.238,26.442)
N1: (-28.983,-33.538,28.811)
O4: (-30.655,-34.586,32.275)
O2: (-29.675,-31.388,29.190)
C6: (-28.955,-34.834,29.241)
C5: (-29.488,-35.246,30.377)
O3': (-25.050,-31.792,27.040)
Image (generated by PyMOL):