Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:3107:369
Extra
PDB:
ATOM 1 O3' C A 106 26.613 -52.219 -2.329 1.00 80.19 O
ATOM 2 P A A 107 26.034 -53.727 -2.277 1.00 79.41 P
ATOM 3 OP1 A A 107 25.594 -54.067 -3.654 1.00 80.56 O
ATOM 4 OP2 A A 107 25.033 -53.797 -1.177 1.00 78.77 O
ATOM 5 O5' A A 107 27.322 -54.575 -1.896 1.00 79.27 O
ATOM 6 C5' A A 107 28.357 -54.760 -2.840 1.00 79.90 C
ATOM 7 C4' A A 107 29.579 -55.345 -2.198 1.00 79.50 C
ATOM 8 O4' A A 107 29.971 -54.530 -1.066 1.00 78.38 O
ATOM 9 C3' A A 107 29.419 -56.725 -1.592 1.00 79.54 C
ATOM 10 O3' A A 107 29.425 -57.762 -2.552 1.00 80.58 O
ATOM 11 C2' A A 107 30.593 -56.781 -0.651 1.00 78.76 C
ATOM 12 O2' A A 107 31.785 -56.973 -1.393 1.00 79.24 O
ATOM 13 C1' A A 107 30.583 -55.350 -0.093 1.00 77.89 C
ATOM 14 N9 A A 107 29.807 -55.259 1.162 1.00 77.04 N
ATOM 15 C8 A A 107 28.548 -54.762 1.363 1.00 76.88 C
ATOM 16 N7 A A 107 28.133 -54.862 2.606 1.00 76.09 N
ATOM 17 C5 A A 107 29.173 -55.478 3.272 1.00 75.70 C
ATOM 18 C6 A A 107 29.358 -55.873 4.607 1.00 74.88 C
ATOM 19 N6 A A 107 28.495 -55.715 5.597 1.00 74.25 N
ATOM 20 N1 A A 107 30.524 -56.457 4.915 1.00 74.73 N
ATOM 21 C2 A A 107 31.446 -56.643 3.957 1.00 75.35 C
ATOM 22 N3 A A 107 31.395 -56.318 2.672 1.00 76.15 N
ATOM 23 C4 A A 107 30.214 -55.729 2.391 1.00 76.29 C
ATOM 24 P G A 108 28.484 -59.052 -2.340 1.00 80.29 P
ATOM 25 OP1 G A 108 28.433 -59.774 -3.629 1.00 81.49 O
ATOM 26 OP2 G A 108 27.208 -58.572 -1.739 1.00 79.82 O
ATOM 27 O5' G A 108 29.305 -59.902 -1.277 1.00 79.73 O
TER
ATOM 1 O3' C B 68 31.572 -59.938 14.707 1.00 63.16 O
ATOM 2 P U B 69 32.424 -58.588 14.555 1.00 65.08 P
ATOM 3 OP1 U B 69 33.476 -58.649 15.592 1.00 64.31 O
ATOM 4 OP2 U B 69 31.473 -57.443 14.568 1.00 64.83 O
ATOM 5 O5' U B 69 33.060 -58.722 13.085 1.00 66.01 O
ATOM 6 C5' U B 69 33.913 -59.802 12.734 1.00 66.49 C
ATOM 7 C4' U B 69 34.338 -59.729 11.278 1.00 67.39 C
ATOM 8 O4' U B 69 33.212 -60.019 10.413 1.00 68.19 O
ATOM 9 C3' U B 69 34.835 -58.380 10.785 1.00 67.22 C
ATOM 10 O3' U B 69 36.176 -58.144 11.134 1.00 66.77 O
ATOM 11 C2' U B 69 34.624 -58.476 9.286 1.00 68.29 C
ATOM 12 O2' U B 69 35.656 -59.236 8.701 1.00 68.83 O
ATOM 13 C1' U B 69 33.334 -59.287 9.208 1.00 68.75 C
ATOM 14 N1 U B 69 32.134 -58.420 9.044 1.00 68.70 N
ATOM 15 C2 U B 69 31.900 -57.937 7.777 1.00 69.43 C
ATOM 16 O2 U B 69 32.647 -58.200 6.850 1.00 70.07 O
ATOM 17 N3 U B 69 30.794 -57.145 7.643 1.00 69.39 N
ATOM 18 C4 U B 69 29.911 -56.805 8.634 1.00 68.72 C
ATOM 19 O4 U B 69 28.948 -56.080 8.375 1.00 68.78 O
ATOM 20 C5 U B 69 30.213 -57.356 9.912 1.00 68.00 C
ATOM 21 C6 U B 69 31.285 -58.124 10.077 1.00 68.01 C
ATOM 22 P G B 70 36.772 -56.656 11.127 1.00 69.55 P
ATOM 23 OP1 G B 70 38.181 -56.772 11.615 1.00 69.13 O
ATOM 24 OP2 G B 70 35.814 -55.788 11.876 1.00 68.88 O
ATOM 25 O5' G B 70 36.763 -56.257 9.578 1.00 70.48 O
TER
ATOM 2 P A A 107 26.034 -53.727 -2.277 1.00 79.41 P
ATOM 3 OP1 A A 107 25.594 -54.067 -3.654 1.00 80.56 O
ATOM 4 OP2 A A 107 25.033 -53.797 -1.177 1.00 78.77 O
ATOM 5 O5' A A 107 27.322 -54.575 -1.896 1.00 79.27 O
ATOM 6 C5' A A 107 28.357 -54.760 -2.840 1.00 79.90 C
ATOM 7 C4' A A 107 29.579 -55.345 -2.198 1.00 79.50 C
ATOM 8 O4' A A 107 29.971 -54.530 -1.066 1.00 78.38 O
ATOM 9 C3' A A 107 29.419 -56.725 -1.592 1.00 79.54 C
ATOM 10 O3' A A 107 29.425 -57.762 -2.552 1.00 80.58 O
ATOM 11 C2' A A 107 30.593 -56.781 -0.651 1.00 78.76 C
ATOM 12 O2' A A 107 31.785 -56.973 -1.393 1.00 79.24 O
ATOM 13 C1' A A 107 30.583 -55.350 -0.093 1.00 77.89 C
ATOM 14 N9 A A 107 29.807 -55.259 1.162 1.00 77.04 N
ATOM 15 C8 A A 107 28.548 -54.762 1.363 1.00 76.88 C
ATOM 16 N7 A A 107 28.133 -54.862 2.606 1.00 76.09 N
ATOM 17 C5 A A 107 29.173 -55.478 3.272 1.00 75.70 C
ATOM 18 C6 A A 107 29.358 -55.873 4.607 1.00 74.88 C
ATOM 19 N6 A A 107 28.495 -55.715 5.597 1.00 74.25 N
ATOM 20 N1 A A 107 30.524 -56.457 4.915 1.00 74.73 N
ATOM 21 C2 A A 107 31.446 -56.643 3.957 1.00 75.35 C
ATOM 22 N3 A A 107 31.395 -56.318 2.672 1.00 76.15 N
ATOM 23 C4 A A 107 30.214 -55.729 2.391 1.00 76.29 C
ATOM 24 P G A 108 28.484 -59.052 -2.340 1.00 80.29 P
ATOM 25 OP1 G A 108 28.433 -59.774 -3.629 1.00 81.49 O
ATOM 26 OP2 G A 108 27.208 -58.572 -1.739 1.00 79.82 O
ATOM 27 O5' G A 108 29.305 -59.902 -1.277 1.00 79.73 O
TER
ATOM 1 O3' C B 68 31.572 -59.938 14.707 1.00 63.16 O
ATOM 2 P U B 69 32.424 -58.588 14.555 1.00 65.08 P
ATOM 3 OP1 U B 69 33.476 -58.649 15.592 1.00 64.31 O
ATOM 4 OP2 U B 69 31.473 -57.443 14.568 1.00 64.83 O
ATOM 5 O5' U B 69 33.060 -58.722 13.085 1.00 66.01 O
ATOM 6 C5' U B 69 33.913 -59.802 12.734 1.00 66.49 C
ATOM 7 C4' U B 69 34.338 -59.729 11.278 1.00 67.39 C
ATOM 8 O4' U B 69 33.212 -60.019 10.413 1.00 68.19 O
ATOM 9 C3' U B 69 34.835 -58.380 10.785 1.00 67.22 C
ATOM 10 O3' U B 69 36.176 -58.144 11.134 1.00 66.77 O
ATOM 11 C2' U B 69 34.624 -58.476 9.286 1.00 68.29 C
ATOM 12 O2' U B 69 35.656 -59.236 8.701 1.00 68.83 O
ATOM 13 C1' U B 69 33.334 -59.287 9.208 1.00 68.75 C
ATOM 14 N1 U B 69 32.134 -58.420 9.044 1.00 68.70 N
ATOM 15 C2 U B 69 31.900 -57.937 7.777 1.00 69.43 C
ATOM 16 O2 U B 69 32.647 -58.200 6.850 1.00 70.07 O
ATOM 17 N3 U B 69 30.794 -57.145 7.643 1.00 69.39 N
ATOM 18 C4 U B 69 29.911 -56.805 8.634 1.00 68.72 C
ATOM 19 O4 U B 69 28.948 -56.080 8.375 1.00 68.78 O
ATOM 20 C5 U B 69 30.213 -57.356 9.912 1.00 68.00 C
ATOM 21 C6 U B 69 31.285 -58.124 10.077 1.00 68.01 C
ATOM 22 P G B 70 36.772 -56.656 11.127 1.00 69.55 P
ATOM 23 OP1 G B 70 38.181 -56.772 11.615 1.00 69.13 O
ATOM 24 OP2 G B 70 35.814 -55.788 11.876 1.00 68.88 O
ATOM 25 O5' G B 70 36.763 -56.257 9.578 1.00 70.48 O
TER
Atoms:
OP1: (25.594,-54.067,-3.654)
OP2: (25.033,-53.797,-1.177)
C3': (29.419,-56.725,-1.592)
C1': (30.583,-55.350,-0.093)
C5': (28.357,-54.760,-2.840)
O4': (29.971,-54.530,-1.066)
C8: (28.548,-54.762,1.363)
O2': (31.785,-56.973,-1.393)
C6: (29.358,-55.873,4.607)
C5: (29.173,-55.478,3.272)
C4: (30.214,-55.729,2.391)
P: (26.034,-53.727,-2.277)
C4': (29.579,-55.345,-2.198)
C2': (30.593,-56.781,-0.651)
C2: (31.446,-56.643,3.957)
N1: (30.524,-56.457,4.915)
N3: (31.395,-56.318,2.672)
N6: (28.495,-55.715,5.597)
N7: (28.133,-54.862,2.606)
N9: (29.807,-55.259,1.162)
O5': (27.322,-54.575,-1.896)
O3': (29.425,-57.762,-2.552)
OP2: (25.033,-53.797,-1.177)
C3': (29.419,-56.725,-1.592)
C1': (30.583,-55.350,-0.093)
C5': (28.357,-54.760,-2.840)
O4': (29.971,-54.530,-1.066)
C8: (28.548,-54.762,1.363)
O2': (31.785,-56.973,-1.393)
C6: (29.358,-55.873,4.607)
C5: (29.173,-55.478,3.272)
C4: (30.214,-55.729,2.391)
P: (26.034,-53.727,-2.277)
C4': (29.579,-55.345,-2.198)
C2': (30.593,-56.781,-0.651)
C2: (31.446,-56.643,3.957)
N1: (30.524,-56.457,4.915)
N3: (31.395,-56.318,2.672)
N6: (28.495,-55.715,5.597)
N7: (28.133,-54.862,2.606)
N9: (29.807,-55.259,1.162)
O5': (27.322,-54.575,-1.896)
O3': (29.425,-57.762,-2.552)
C4: (29.911,-56.805,8.634)
N3: (30.794,-57.145,7.643)
OP1: (33.476,-58.649,15.592)
OP2: (31.473,-57.443,14.568)
C2: (31.900,-57.937,7.777)
C1': (33.334,-59.287,9.208)
C3': (34.835,-58.380,10.785)
O5': (33.060,-58.722,13.085)
O4': (33.212,-60.019,10.413)
C5': (33.913,-59.802,12.734)
P: (32.424,-58.588,14.555)
C4': (34.338,-59.729,11.278)
C2': (34.624,-58.476,9.286)
O2': (35.656,-59.236,8.701)
N1: (32.134,-58.420,9.044)
O4: (28.948,-56.080,8.375)
O2: (32.647,-58.200,6.850)
C6: (31.285,-58.124,10.077)
C5: (30.213,-57.356,9.912)
O3': (36.176,-58.144,11.134)
N3: (30.794,-57.145,7.643)
OP1: (33.476,-58.649,15.592)
OP2: (31.473,-57.443,14.568)
C2: (31.900,-57.937,7.777)
C1': (33.334,-59.287,9.208)
C3': (34.835,-58.380,10.785)
O5': (33.060,-58.722,13.085)
O4': (33.212,-60.019,10.413)
C5': (33.913,-59.802,12.734)
P: (32.424,-58.588,14.555)
C4': (34.338,-59.729,11.278)
C2': (34.624,-58.476,9.286)
O2': (35.656,-59.236,8.701)
N1: (32.134,-58.420,9.044)
O4: (28.948,-56.080,8.375)
O2: (32.647,-58.200,6.850)
C6: (31.285,-58.124,10.077)
C5: (30.213,-57.356,9.912)
O3': (36.176,-58.144,11.134)
Image (generated by PyMOL):