Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01304:01268
Extra
PDB:
ATOM 1 O3' G A1303 16.878 120.803 57.879 1.00 44.39 O
ATOM 2 P A A1304 17.439 119.305 57.910 1.00 42.32 P
ATOM 3 OP1 A A1304 17.826 119.052 59.323 1.00 44.92 O
ATOM 4 OP2 A A1304 18.433 119.117 56.830 1.00 40.15 O
ATOM 5 O5' A A1304 16.169 118.413 57.571 1.00 44.02 O
ATOM 6 C5' A A1304 15.013 118.402 58.430 1.00 45.19 C
ATOM 7 C4' A A1304 13.921 117.585 57.796 1.00 46.48 C
ATOM 8 O4' A A1304 13.470 118.268 56.603 1.00 47.77 O
ATOM 9 C3' A A1304 14.380 116.218 57.312 1.00 47.12 C
ATOM 10 O3' A A1304 14.326 115.254 58.356 1.00 46.48 O
ATOM 11 C2' A A1304 13.418 115.931 56.168 1.00 47.95 C
ATOM 12 O2' A A1304 12.154 115.487 56.616 1.00 48.78 O
ATOM 13 C1' A A1304 13.255 117.327 55.565 1.00 49.34 C
ATOM 14 N9 A A1304 14.169 117.640 54.461 1.00 50.81 N
ATOM 15 C8 A A1304 15.278 118.448 54.474 1.00 51.13 C
ATOM 16 N7 A A1304 15.867 118.554 53.309 1.00 51.40 N
ATOM 17 C5 A A1304 15.097 117.760 52.474 1.00 51.58 C
ATOM 18 C6 A A1304 15.186 117.466 51.110 1.00 52.55 C
ATOM 19 N6 A A1304 16.122 117.959 50.304 1.00 55.45 N
ATOM 20 N1 A A1304 14.263 116.638 50.587 1.00 53.85 N
ATOM 21 C2 A A1304 13.317 116.147 51.386 1.00 53.81 C
ATOM 22 N3 A A1304 13.123 116.353 52.679 1.00 53.78 N
ATOM 23 C4 A A1304 14.058 117.182 53.171 1.00 51.91 C
ATOM 24 P U A1305 15.432 114.093 58.426 1.00 46.43 P
ATOM 25 OP1 U A1305 15.325 113.421 59.745 1.00 47.96 O
ATOM 26 OP2 U A1305 16.726 114.680 58.005 1.00 46.58 O
ATOM 27 O5' U A1305 14.993 113.061 57.297 1.00 46.75 O
TER
ATOM 1 O3' A B1267 15.690 112.910 41.120 1.00 46.89 O
ATOM 2 P U B1268 14.419 113.880 40.976 1.00 47.31 P
ATOM 3 OP1 U B1268 13.652 113.366 39.820 1.00 46.61 O
ATOM 4 OP2 U B1268 14.855 115.298 40.999 1.00 46.94 O
ATOM 5 O5' U B1268 13.584 113.620 42.301 1.00 46.27 O
ATOM 6 C5' U B1268 12.873 112.395 42.487 1.00 47.11 C
ATOM 7 C4' U B1268 12.237 112.365 43.852 1.00 48.66 C
ATOM 8 O4' U B1268 13.275 112.352 44.872 1.00 50.09 O
ATOM 9 C3' U B1268 11.400 113.573 44.238 1.00 48.68 C
ATOM 10 O3' U B1268 10.106 113.590 43.646 1.00 48.48 O
ATOM 11 C2' U B1268 11.352 113.434 45.754 1.00 48.85 C
ATOM 12 O2' U B1268 10.439 112.453 46.194 1.00 50.26 O
ATOM 13 C1' U B1268 12.780 112.973 46.053 1.00 49.44 C
ATOM 14 N1 U B1268 13.627 114.124 46.401 1.00 49.10 N
ATOM 15 C2 U B1268 13.558 114.575 47.703 1.00 49.40 C
ATOM 16 O2 U B1268 12.897 114.015 48.561 1.00 50.66 O
ATOM 17 N3 U B1268 14.287 115.704 47.968 1.00 49.36 N
ATOM 18 C4 U B1268 15.074 116.411 47.090 1.00 49.47 C
ATOM 19 O4 U B1268 15.581 117.476 47.458 1.00 48.05 O
ATOM 20 C5 U B1268 15.131 115.858 45.768 1.00 49.09 C
ATOM 21 C6 U B1268 14.426 114.759 45.477 1.00 48.96 C
ATOM 22 P U B1269 9.397 115.002 43.330 1.00 48.65 P
ATOM 23 OP1 U B1269 8.077 114.755 42.702 1.00 51.55 O
ATOM 24 OP2 U B1269 10.388 115.840 42.627 1.00 49.55 O
ATOM 25 O5' U B1269 9.154 115.652 44.764 1.00 48.85 O
TER
ATOM 2 P A A1304 17.439 119.305 57.910 1.00 42.32 P
ATOM 3 OP1 A A1304 17.826 119.052 59.323 1.00 44.92 O
ATOM 4 OP2 A A1304 18.433 119.117 56.830 1.00 40.15 O
ATOM 5 O5' A A1304 16.169 118.413 57.571 1.00 44.02 O
ATOM 6 C5' A A1304 15.013 118.402 58.430 1.00 45.19 C
ATOM 7 C4' A A1304 13.921 117.585 57.796 1.00 46.48 C
ATOM 8 O4' A A1304 13.470 118.268 56.603 1.00 47.77 O
ATOM 9 C3' A A1304 14.380 116.218 57.312 1.00 47.12 C
ATOM 10 O3' A A1304 14.326 115.254 58.356 1.00 46.48 O
ATOM 11 C2' A A1304 13.418 115.931 56.168 1.00 47.95 C
ATOM 12 O2' A A1304 12.154 115.487 56.616 1.00 48.78 O
ATOM 13 C1' A A1304 13.255 117.327 55.565 1.00 49.34 C
ATOM 14 N9 A A1304 14.169 117.640 54.461 1.00 50.81 N
ATOM 15 C8 A A1304 15.278 118.448 54.474 1.00 51.13 C
ATOM 16 N7 A A1304 15.867 118.554 53.309 1.00 51.40 N
ATOM 17 C5 A A1304 15.097 117.760 52.474 1.00 51.58 C
ATOM 18 C6 A A1304 15.186 117.466 51.110 1.00 52.55 C
ATOM 19 N6 A A1304 16.122 117.959 50.304 1.00 55.45 N
ATOM 20 N1 A A1304 14.263 116.638 50.587 1.00 53.85 N
ATOM 21 C2 A A1304 13.317 116.147 51.386 1.00 53.81 C
ATOM 22 N3 A A1304 13.123 116.353 52.679 1.00 53.78 N
ATOM 23 C4 A A1304 14.058 117.182 53.171 1.00 51.91 C
ATOM 24 P U A1305 15.432 114.093 58.426 1.00 46.43 P
ATOM 25 OP1 U A1305 15.325 113.421 59.745 1.00 47.96 O
ATOM 26 OP2 U A1305 16.726 114.680 58.005 1.00 46.58 O
ATOM 27 O5' U A1305 14.993 113.061 57.297 1.00 46.75 O
TER
ATOM 1 O3' A B1267 15.690 112.910 41.120 1.00 46.89 O
ATOM 2 P U B1268 14.419 113.880 40.976 1.00 47.31 P
ATOM 3 OP1 U B1268 13.652 113.366 39.820 1.00 46.61 O
ATOM 4 OP2 U B1268 14.855 115.298 40.999 1.00 46.94 O
ATOM 5 O5' U B1268 13.584 113.620 42.301 1.00 46.27 O
ATOM 6 C5' U B1268 12.873 112.395 42.487 1.00 47.11 C
ATOM 7 C4' U B1268 12.237 112.365 43.852 1.00 48.66 C
ATOM 8 O4' U B1268 13.275 112.352 44.872 1.00 50.09 O
ATOM 9 C3' U B1268 11.400 113.573 44.238 1.00 48.68 C
ATOM 10 O3' U B1268 10.106 113.590 43.646 1.00 48.48 O
ATOM 11 C2' U B1268 11.352 113.434 45.754 1.00 48.85 C
ATOM 12 O2' U B1268 10.439 112.453 46.194 1.00 50.26 O
ATOM 13 C1' U B1268 12.780 112.973 46.053 1.00 49.44 C
ATOM 14 N1 U B1268 13.627 114.124 46.401 1.00 49.10 N
ATOM 15 C2 U B1268 13.558 114.575 47.703 1.00 49.40 C
ATOM 16 O2 U B1268 12.897 114.015 48.561 1.00 50.66 O
ATOM 17 N3 U B1268 14.287 115.704 47.968 1.00 49.36 N
ATOM 18 C4 U B1268 15.074 116.411 47.090 1.00 49.47 C
ATOM 19 O4 U B1268 15.581 117.476 47.458 1.00 48.05 O
ATOM 20 C5 U B1268 15.131 115.858 45.768 1.00 49.09 C
ATOM 21 C6 U B1268 14.426 114.759 45.477 1.00 48.96 C
ATOM 22 P U B1269 9.397 115.002 43.330 1.00 48.65 P
ATOM 23 OP1 U B1269 8.077 114.755 42.702 1.00 51.55 O
ATOM 24 OP2 U B1269 10.388 115.840 42.627 1.00 49.55 O
ATOM 25 O5' U B1269 9.154 115.652 44.764 1.00 48.85 O
TER
Atoms:
OP1: (17.826,119.052,59.323)
OP2: (18.433,119.117,56.830)
C3': (14.380,116.218,57.312)
C1': (13.255,117.327,55.565)
C5': (15.013,118.402,58.430)
O4': (13.470,118.268,56.603)
C8: (15.278,118.448,54.474)
O2': (12.154,115.487,56.616)
C6: (15.186,117.466,51.110)
C5: (15.097,117.760,52.474)
C4: (14.058,117.182,53.171)
P: (17.439,119.305,57.910)
C4': (13.921,117.585,57.796)
C2': (13.418,115.931,56.168)
C2: (13.317,116.147,51.386)
N1: (14.263,116.638,50.587)
N3: (13.123,116.353,52.679)
N6: (16.122,117.959,50.304)
N7: (15.867,118.554,53.309)
N9: (14.169,117.640,54.461)
O5': (16.169,118.413,57.571)
O3': (14.326,115.254,58.356)
OP2: (18.433,119.117,56.830)
C3': (14.380,116.218,57.312)
C1': (13.255,117.327,55.565)
C5': (15.013,118.402,58.430)
O4': (13.470,118.268,56.603)
C8: (15.278,118.448,54.474)
O2': (12.154,115.487,56.616)
C6: (15.186,117.466,51.110)
C5: (15.097,117.760,52.474)
C4: (14.058,117.182,53.171)
P: (17.439,119.305,57.910)
C4': (13.921,117.585,57.796)
C2': (13.418,115.931,56.168)
C2: (13.317,116.147,51.386)
N1: (14.263,116.638,50.587)
N3: (13.123,116.353,52.679)
N6: (16.122,117.959,50.304)
N7: (15.867,118.554,53.309)
N9: (14.169,117.640,54.461)
O5': (16.169,118.413,57.571)
O3': (14.326,115.254,58.356)
C4: (15.074,116.411,47.090)
N3: (14.287,115.704,47.968)
OP1: (13.652,113.366,39.820)
OP2: (14.855,115.298,40.999)
C2: (13.558,114.575,47.703)
C1': (12.780,112.973,46.053)
C3': (11.400,113.573,44.238)
O5': (13.584,113.620,42.301)
O4': (13.275,112.352,44.872)
C5': (12.873,112.395,42.487)
P: (14.419,113.880,40.976)
C4': (12.237,112.365,43.852)
C2': (11.352,113.434,45.754)
O2': (10.439,112.453,46.194)
N1: (13.627,114.124,46.401)
O4: (15.581,117.476,47.458)
O2: (12.897,114.015,48.561)
C6: (14.426,114.759,45.477)
C5: (15.131,115.858,45.768)
O3': (10.106,113.590,43.646)
N3: (14.287,115.704,47.968)
OP1: (13.652,113.366,39.820)
OP2: (14.855,115.298,40.999)
C2: (13.558,114.575,47.703)
C1': (12.780,112.973,46.053)
C3': (11.400,113.573,44.238)
O5': (13.584,113.620,42.301)
O4': (13.275,112.352,44.872)
C5': (12.873,112.395,42.487)
P: (14.419,113.880,40.976)
C4': (12.237,112.365,43.852)
C2': (11.352,113.434,45.754)
O2': (10.439,112.453,46.194)
N1: (13.627,114.124,46.401)
O4: (15.581,117.476,47.458)
O2: (12.897,114.015,48.561)
C6: (14.426,114.759,45.477)
C5: (15.131,115.858,45.768)
O3': (10.106,113.590,43.646)
Image (generated by PyMOL):