ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3LWQ:D10:E11

Extra

PDB:
ATOM 1 O3' A A 9 16.622 5.186 36.192 1.00182.68 O
ATOM 2 P A A 10 18.148 4.686 36.162 1.00194.75 P
ATOM 3 OP1 A A 10 19.029 5.807 36.559 1.00193.00 O
ATOM 4 OP2 A A 10 18.395 3.966 34.893 1.00192.50 O
ATOM 5 O5' A A 10 18.240 3.661 37.390 1.00219.31 O
ATOM 6 C5' A A 10 17.905 4.081 38.706 1.00218.34 C
ATOM 7 C4' A A 10 17.714 2.912 39.642 1.00216.91 C
ATOM 8 O4' A A 10 16.520 2.168 39.273 1.00214.02 O
ATOM 9 C3' A A 10 18.803 1.850 39.627 1.00216.77 C
ATOM 10 O3' A A 10 19.985 2.211 40.324 1.00217.84 O
ATOM 11 C2' A A 10 18.068 0.653 40.215 1.00214.41 C
ATOM 12 O2' A A 10 17.843 0.830 41.607 1.00213.75 O
ATOM 13 C1' A A 10 16.726 0.788 39.498 1.00210.51 C
ATOM 14 N9 A A 10 16.749 0.095 38.193 1.00201.20 N
ATOM 15 C8 A A 10 16.821 0.667 36.953 1.00196.56 C
ATOM 16 N7 A A 10 16.833 -0.197 35.964 1.00192.53 N
ATOM 17 C5 A A 10 16.770 -1.425 36.598 1.00191.15 C
ATOM 18 C6 A A 10 16.748 -2.746 36.107 1.00186.88 C
ATOM 19 N6 A A 10 16.790 -3.053 34.806 1.00183.71 N
ATOM 20 N1 A A 10 16.682 -3.744 37.009 1.00187.61 N
ATOM 21 C2 A A 10 16.641 -3.437 38.311 1.00189.89 C
ATOM 22 N3 A A 10 16.655 -2.238 38.891 1.00192.42 N
ATOM 23 C4 A A 10 16.721 -1.264 37.971 1.00195.02 C
ATOM 24 P A A 11 21.404 1.702 39.772 1.00191.67 P
ATOM 25 OP1 A A 11 22.484 2.405 40.501 1.00189.48 O
ATOM 26 OP2 A A 11 21.379 1.701 38.291 1.00189.55 O
ATOM 27 O5' A A 11 21.491 0.191 40.295 1.00199.28 O
TER

ATOM 1 O3' U B 10 16.179 -14.099 36.049 1.00176.46 O
ATOM 2 P U B 11 14.791 -14.263 35.266 1.00178.03 P
ATOM 3 OP1 U B 11 14.685 -15.678 34.846 1.00178.27 O
ATOM 4 OP2 U B 11 14.717 -13.186 34.257 1.00176.39 O
ATOM 5 O5' U B 11 13.669 -13.990 36.375 1.00187.68 O
ATOM 6 C5' U B 11 13.168 -12.676 36.602 1.00189.24 C
ATOM 7 C4' U B 11 13.972 -11.963 37.675 1.00192.91 C
ATOM 8 O4' U B 11 15.193 -11.432 37.102 1.00191.74 O
ATOM 9 C3' U B 11 13.288 -10.753 38.294 1.00195.55 C
ATOM 10 O3' U B 11 12.436 -11.165 39.356 1.00197.04 O
ATOM 11 C2' U B 11 14.476 -9.946 38.816 1.00195.10 C
ATOM 12 O2' U B 11 14.885 -10.355 40.108 1.00196.99 O
ATOM 13 C1' U B 11 15.574 -10.254 37.795 1.00192.02 C
ATOM 14 N1 U B 11 15.826 -9.148 36.805 1.00189.20 N
ATOM 15 C2 U B 11 16.342 -7.941 37.246 1.00186.79 C
ATOM 16 O2 U B 11 16.607 -7.710 38.415 1.00184.79 O
ATOM 17 N3 U B 11 16.537 -7.000 36.259 1.00185.00 N
ATOM 18 C4 U B 11 16.278 -7.134 34.905 1.00181.49 C
ATOM 19 O4 U B 11 16.506 -6.198 34.142 1.00176.34 O
ATOM 20 C5 U B 11 15.745 -8.419 34.525 1.00183.52 C
ATOM 21 C6 U B 11 15.546 -9.353 35.467 1.00186.92 C
ATOM 22 P U B 12 10.995 -10.498 39.560 1.00227.16 P
ATOM 23 OP1 U B 12 10.339 -11.159 40.711 1.00230.02 O
ATOM 24 OP2 U B 12 10.317 -10.439 38.246 1.00226.32 O
ATOM 25 O5' U B 12 11.301 -9.014 40.083 1.00203.07 O
TER

Atoms:
OP1: (19.029,5.807,36.559)
OP2: (18.395,3.966,34.893)
C3': (18.803,1.850,39.627)
C1': (16.726,0.788,39.498)
C5': (17.905,4.081,38.706)
O4': (16.520,2.168,39.273)
C8: (16.821,0.667,36.953)
O2': (17.843,0.830,41.607)
C6: (16.748,-2.746,36.107)
C5: (16.770,-1.425,36.598)
C4: (16.721,-1.264,37.971)
P: (18.148,4.686,36.162)
C4': (17.714,2.912,39.642)
C2': (18.068,0.653,40.215)
C2: (16.641,-3.437,38.311)
N1: (16.682,-3.744,37.009)
N3: (16.655,-2.238,38.891)
N6: (16.790,-3.053,34.806)
N7: (16.833,-0.197,35.964)
N9: (16.749,0.095,38.193)
O5': (18.240,3.661,37.390)
O3': (19.985,2.211,40.324)
C4: (16.278,-7.134,34.905)
N3: (16.537,-7.000,36.259)
OP1: (14.685,-15.678,34.846)
OP2: (14.717,-13.186,34.257)
C2: (16.342,-7.941,37.246)
C1': (15.574,-10.254,37.795)
C3': (13.288,-10.753,38.294)
O5': (13.669,-13.990,36.375)
O4': (15.193,-11.432,37.102)
C5': (13.168,-12.676,36.602)
P: (14.791,-14.263,35.266)
C4': (13.972,-11.963,37.675)
C2': (14.476,-9.946,38.816)
O2': (14.885,-10.355,40.108)
N1: (15.826,-9.148,36.805)
O4: (16.506,-6.198,34.142)
O2: (16.607,-7.710,38.415)
C6: (15.546,-9.353,35.467)
C5: (15.745,-8.419,34.525)
O3': (12.436,-11.165,39.356)
Image (generated by PyMOL):
PyMOL image
show in jmol