ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01201:01081

Extra

PDB:
ATOM 1 O3' G A1200 28.419 119.204 128.572 1.00 37.98 O
ATOM 2 P A A1201 29.351 119.171 129.888 1.00 39.28 P
ATOM 3 OP1 A A1201 29.121 120.456 130.580 1.00 39.99 O
ATOM 4 OP2 A A1201 30.723 118.795 129.496 1.00 40.37 O
ATOM 5 O5' A A1201 28.810 117.962 130.783 1.00 39.32 O
ATOM 6 C5' A A1201 27.448 117.900 131.226 1.00 35.49 C
ATOM 7 C4' A A1201 26.886 116.521 130.976 1.00 36.32 C
ATOM 8 O4' A A1201 27.495 116.002 129.763 1.00 38.26 O
ATOM 9 C3' A A1201 27.161 115.424 131.999 1.00 36.11 C
ATOM 10 O3' A A1201 26.222 115.456 133.072 1.00 37.80 O
ATOM 11 C2' A A1201 26.945 114.174 131.161 1.00 37.03 C
ATOM 12 O2' A A1201 25.574 113.947 130.911 1.00 36.62 O
ATOM 13 C1' A A1201 27.599 114.588 129.845 1.00 36.88 C
ATOM 14 N9 A A1201 29.015 114.215 129.769 1.00 36.58 N
ATOM 15 C8 A A1201 30.124 115.025 129.851 1.00 35.16 C
ATOM 16 N7 A A1201 31.258 114.380 129.718 1.00 35.77 N
ATOM 17 C5 A A1201 30.872 113.057 129.540 1.00 35.88 C
ATOM 18 C6 A A1201 31.608 111.868 129.334 1.00 36.93 C
ATOM 19 N6 A A1201 32.941 111.821 129.247 1.00 33.82 N
ATOM 20 N1 A A1201 30.914 110.715 129.212 1.00 37.12 N
ATOM 21 C2 A A1201 29.575 110.764 129.280 1.00 36.26 C
ATOM 22 N3 A A1201 28.776 111.813 129.456 1.00 34.43 N
ATOM 23 C4 A A1201 29.495 112.941 129.582 1.00 34.76 C
ATOM 24 P C A1202 26.558 114.729 134.473 1.00 36.38 P
ATOM 25 OP1 C A1202 25.511 115.173 135.415 1.00 37.83 O
ATOM 26 OP2 C A1202 27.984 114.948 134.813 1.00 34.21 O
ATOM 27 O5' C A1202 26.319 113.179 134.187 1.00 36.11 O
TER

ATOM 1 O3' G B1080 35.900 101.276 128.345 1.00 35.44 O
ATOM 2 P U B1081 35.796 101.955 126.892 1.00 37.40 P
ATOM 3 OP1 U B1081 35.735 100.864 125.885 1.00 39.61 O
ATOM 4 OP2 U B1081 36.845 102.994 126.783 1.00 35.24 O
ATOM 5 O5' U B1081 34.374 102.668 126.909 1.00 37.42 O
ATOM 6 C5' U B1081 33.178 101.884 126.818 1.00 34.99 C
ATOM 7 C4' U B1081 31.970 102.777 126.763 1.00 36.71 C
ATOM 8 O4' U B1081 31.890 103.564 127.978 1.00 36.81 O
ATOM 9 C3' U B1081 31.946 103.843 125.685 1.00 37.89 C
ATOM 10 O3' U B1081 31.600 103.331 124.406 1.00 41.31 O
ATOM 11 C2' U B1081 30.860 104.762 126.214 1.00 37.61 C
ATOM 12 O2' U B1081 29.568 104.213 126.020 1.00 39.78 O
ATOM 13 C1' U B1081 31.191 104.767 127.706 1.00 35.98 C
ATOM 14 N1 U B1081 32.039 105.915 128.059 1.00 35.69 N
ATOM 15 C2 U B1081 31.400 107.103 128.349 1.00 35.98 C
ATOM 16 O2 U B1081 30.194 107.212 128.364 1.00 40.70 O
ATOM 17 N3 U B1081 32.225 108.163 128.614 1.00 35.71 N
ATOM 18 C4 U B1081 33.595 108.159 128.619 1.00 35.02 C
ATOM 19 O4 U B1081 34.196 109.208 128.832 1.00 35.67 O
ATOM 20 C5 U B1081 34.189 106.891 128.336 1.00 35.58 C
ATOM 21 C6 U B1081 33.410 105.835 128.077 1.00 36.53 C
ATOM 22 P A B1082 32.200 104.026 123.086 1.00 41.39 P
ATOM 23 OP1 A B1082 32.064 105.503 123.207 1.00 39.80 O
ATOM 24 OP2 A B1082 31.616 103.317 121.916 1.00 39.77 O
ATOM 25 O5' A B1082 33.751 103.690 123.153 1.00 42.83 O
TER

Atoms:
OP1: (29.121,120.456,130.580)
OP2: (30.723,118.795,129.496)
C3': (27.161,115.424,131.999)
C1': (27.599,114.588,129.845)
C5': (27.448,117.900,131.226)
O4': (27.495,116.002,129.763)
C8: (30.124,115.025,129.851)
O2': (25.574,113.947,130.911)
C6: (31.608,111.868,129.334)
C5: (30.872,113.057,129.540)
C4: (29.495,112.941,129.582)
P: (29.351,119.171,129.888)
C4': (26.886,116.521,130.976)
C2': (26.945,114.174,131.161)
C2: (29.575,110.764,129.280)
N1: (30.914,110.715,129.212)
N3: (28.776,111.813,129.456)
N6: (32.941,111.821,129.247)
N7: (31.258,114.380,129.718)
N9: (29.015,114.215,129.769)
O5': (28.810,117.962,130.783)
O3': (26.222,115.456,133.072)
C4: (33.595,108.159,128.619)
N3: (32.225,108.163,128.614)
OP1: (35.735,100.864,125.885)
OP2: (36.845,102.994,126.783)
C2: (31.400,107.103,128.349)
C1': (31.191,104.767,127.706)
C3': (31.946,103.843,125.685)
O5': (34.374,102.668,126.909)
O4': (31.890,103.564,127.978)
C5': (33.178,101.884,126.818)
P: (35.796,101.955,126.892)
C4': (31.970,102.777,126.763)
C2': (30.860,104.762,126.214)
O2': (29.568,104.213,126.020)
N1: (32.039,105.915,128.059)
O4: (34.196,109.208,128.832)
O2: (30.194,107.212,128.364)
C6: (33.410,105.835,128.077)
C5: (34.189,106.891,128.336)
O3': (31.600,103.331,124.406)
Image (generated by PyMOL):
PyMOL image
show in jmol