ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:02516:02647

Extra

PDB:
ATOM 1 O3' C A2515 36.089 132.775 130.417 1.00 62.32 O
ATOM 2 P A A2516 37.583 132.485 130.917 1.00 63.04 P
ATOM 3 OP1 A A2516 37.994 131.202 130.282 1.00 64.70 O
ATOM 4 OP2 A A2516 37.656 132.639 132.397 1.00 58.69 O
ATOM 5 O5' A A2516 38.411 133.659 130.236 1.00 59.94 O
ATOM 6 C5' A A2516 38.382 133.828 128.813 1.00 56.33 C
ATOM 7 C4' A A2516 39.221 135.005 128.412 1.00 54.43 C
ATOM 8 O4' A A2516 38.570 136.245 128.794 1.00 54.72 O
ATOM 9 C3' A A2516 40.579 135.100 129.082 1.00 52.98 C
ATOM 10 O3' A A2516 41.514 134.214 128.489 1.00 53.21 O
ATOM 11 C2' A A2516 40.915 136.559 128.844 1.00 52.23 C
ATOM 12 O2' A A2516 41.263 136.774 127.495 1.00 52.45 O
ATOM 13 C1' A A2516 39.557 137.214 129.113 1.00 52.19 C
ATOM 14 N9 A A2516 39.412 137.570 130.524 1.00 52.07 N
ATOM 15 C8 A A2516 38.746 136.885 131.513 1.00 50.68 C
ATOM 16 N7 A A2516 38.839 137.442 132.696 1.00 50.91 N
ATOM 17 C5 A A2516 39.606 138.577 132.470 1.00 51.02 C
ATOM 18 C6 A A2516 40.066 139.594 133.323 1.00 51.45 C
ATOM 19 N6 A A2516 39.800 139.645 134.631 1.00 51.88 N
ATOM 20 N1 A A2516 40.816 140.574 132.780 1.00 50.26 N
ATOM 21 C2 A A2516 41.074 140.532 131.470 1.00 50.38 C
ATOM 22 N3 A A2516 40.697 139.637 130.565 1.00 50.58 N
ATOM 23 C4 A A2516 39.959 138.672 131.136 1.00 51.32 C
ATOM 24 P A A2517 42.661 133.544 129.390 1.00 50.93 P
ATOM 25 OP1 A A2517 43.265 132.492 128.546 1.00 52.74 O
ATOM 26 OP2 A A2517 42.128 133.192 130.728 1.00 50.13 O
ATOM 27 O5' A A2517 43.722 134.715 129.556 1.00 50.62 O
TER

ATOM 1 O3' U B2646 45.129 148.498 137.452 1.00 46.13 O
ATOM 2 P U B2647 43.844 148.993 136.628 1.00 44.21 P
ATOM 3 OP1 U B2647 44.027 150.439 136.360 1.00 44.27 O
ATOM 4 OP2 U B2647 42.631 148.526 137.352 1.00 45.88 O
ATOM 5 O5' U B2647 43.929 148.190 135.257 1.00 43.19 O
ATOM 6 C5' U B2647 44.881 148.563 134.249 1.00 42.89 C
ATOM 7 C4' U B2647 44.780 147.635 133.067 1.00 43.97 C
ATOM 8 O4' U B2647 45.107 146.280 133.487 1.00 45.46 O
ATOM 9 C3' U B2647 43.402 147.482 132.451 1.00 44.71 C
ATOM 10 O3' U B2647 43.036 148.560 131.600 1.00 44.16 O
ATOM 11 C2' U B2647 43.551 146.169 131.703 1.00 46.24 C
ATOM 12 O2' U B2647 44.304 146.316 130.517 1.00 46.88 O
ATOM 13 C1' U B2647 44.364 145.355 132.711 1.00 46.64 C
ATOM 14 N1 U B2647 43.505 144.555 133.601 1.00 47.83 N
ATOM 15 C2 U B2647 43.031 143.364 133.098 1.00 47.41 C
ATOM 16 O2 U B2647 43.310 142.968 131.988 1.00 48.97 O
ATOM 17 N3 U B2647 42.217 142.652 133.941 1.00 48.86 N
ATOM 18 C4 U B2647 41.837 142.993 135.219 1.00 50.83 C
ATOM 19 O4 U B2647 41.093 142.232 135.851 1.00 52.88 O
ATOM 20 C5 U B2647 42.371 144.242 135.687 1.00 49.72 C
ATOM 21 C6 U B2647 43.171 144.964 134.880 1.00 49.52 C
ATOM 22 P G B2648 41.486 148.966 131.468 1.00 42.10 P
ATOM 23 OP1 G B2648 41.387 150.349 130.951 1.00 44.56 O
ATOM 24 OP2 G B2648 40.807 148.600 132.732 1.00 44.57 O
ATOM 25 O5' G B2648 40.908 147.982 130.365 1.00 45.07 O
TER

Atoms:
OP1: (37.994,131.202,130.282)
OP2: (37.656,132.639,132.397)
C3': (40.579,135.100,129.082)
C1': (39.557,137.214,129.113)
C5': (38.382,133.828,128.813)
O4': (38.570,136.245,128.794)
C8: (38.746,136.885,131.513)
O2': (41.263,136.774,127.495)
C6: (40.066,139.594,133.323)
C5: (39.606,138.577,132.470)
C4: (39.959,138.672,131.136)
P: (37.583,132.485,130.917)
C4': (39.221,135.005,128.412)
C2': (40.915,136.559,128.844)
C2: (41.074,140.532,131.470)
N1: (40.816,140.574,132.780)
N3: (40.697,139.637,130.565)
N6: (39.800,139.645,134.631)
N7: (38.839,137.442,132.696)
N9: (39.412,137.570,130.524)
O5': (38.411,133.659,130.236)
O3': (41.514,134.214,128.489)
C4: (41.837,142.993,135.219)
N3: (42.217,142.652,133.941)
OP1: (44.027,150.439,136.360)
OP2: (42.631,148.526,137.352)
C2: (43.031,143.364,133.098)
C1': (44.364,145.355,132.711)
C3': (43.402,147.482,132.451)
O5': (43.929,148.190,135.257)
O4': (45.107,146.280,133.487)
C5': (44.881,148.563,134.249)
P: (43.844,148.993,136.628)
C4': (44.780,147.635,133.067)
C2': (43.551,146.169,131.703)
O2': (44.304,146.316,130.517)
N1: (43.505,144.555,133.601)
O4: (41.093,142.232,135.851)
O2: (43.310,142.968,131.988)
C6: (43.171,144.964,134.880)
C5: (42.371,144.242,135.687)
O3': (43.036,148.560,131.600)
Image (generated by PyMOL):
PyMOL image
show in jmol