ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1572:1428

Extra

PDB:
ATOM 1 O3' U A 571 78.613 15.476 53.056 1.00 43.51 O
ATOM 2 P A A 572 77.130 15.302 52.437 1.00 41.01 P
ATOM 3 OP1 A A 572 76.228 14.931 53.571 1.00 40.79 O
ATOM 4 OP2 A A 572 77.211 14.366 51.266 1.00 40.96 O
ATOM 5 O5' A A 572 76.817 16.793 51.932 1.00 41.20 O
ATOM 6 C5' A A 572 76.948 17.922 52.794 1.00 41.34 C
ATOM 7 C4' A A 572 77.018 19.206 51.995 1.00 41.59 C
ATOM 8 O4' A A 572 78.318 19.328 51.392 1.00 41.82 O
ATOM 9 C3' A A 572 76.076 19.343 50.811 1.00 41.55 C
ATOM 10 O3' A A 572 74.790 19.754 51.197 1.00 41.42 O
ATOM 11 C2' A A 572 76.783 20.397 49.979 1.00 41.86 C
ATOM 12 O2' A A 572 76.601 21.661 50.567 1.00 42.02 O
ATOM 13 C1' A A 572 78.231 20.016 50.167 1.00 41.99 C
ATOM 14 N9 A A 572 78.691 19.127 49.118 1.00 41.98 N
ATOM 15 C8 A A 572 78.664 17.782 49.224 1.00 41.76 C
ATOM 16 N7 A A 572 79.119 17.197 48.157 1.00 41.82 N
ATOM 17 C5 A A 572 79.444 18.243 47.324 1.00 42.08 C
ATOM 18 C6 A A 572 79.985 18.248 46.038 1.00 42.26 C
ATOM 19 N6 A A 572 80.239 17.109 45.394 1.00 42.19 N
ATOM 20 N1 A A 572 80.238 19.470 45.473 1.00 42.54 N
ATOM 21 C2 A A 572 79.916 20.559 46.184 1.00 42.60 C
ATOM 22 N3 A A 572 79.386 20.648 47.407 1.00 42.44 N
ATOM 23 C4 A A 572 79.184 19.446 47.918 1.00 42.18 C
ATOM 24 P U A 573 73.488 19.375 50.329 1.00 40.10 P
ATOM 25 OP1 U A 573 72.331 19.970 51.074 1.00 40.02 O
ATOM 26 OP2 U A 573 73.507 17.906 50.067 1.00 39.90 O
ATOM 27 O5' U A 573 73.699 20.158 48.972 1.00 40.35 O
TER

ATOM 1 O3' U B 427 83.772 19.764 36.399 1.00 40.68 O
ATOM 2 P U B 428 85.004 20.206 37.371 1.00 42.47 P
ATOM 3 OP1 U B 428 86.045 20.811 36.493 1.00 42.86 O
ATOM 4 OP2 U B 428 85.366 19.016 38.212 1.00 42.24 O
ATOM 5 O5' U B 428 84.375 21.336 38.286 1.00 42.43 O
ATOM 6 C5' U B 428 83.839 22.527 37.725 1.00 42.62 C
ATOM 7 C4' U B 428 83.056 23.277 38.753 1.00 42.49 C
ATOM 8 O4' U B 428 81.904 22.491 39.115 1.00 42.14 O
ATOM 9 C3' U B 428 83.757 23.451 40.078 1.00 42.47 C
ATOM 10 O3' U B 428 84.703 24.471 40.102 1.00 42.80 O
ATOM 11 C2' U B 428 82.622 23.652 41.035 1.00 42.22 C
ATOM 12 O2' U B 428 82.089 24.948 40.862 1.00 42.40 O
ATOM 13 C1' U B 428 81.628 22.641 40.485 1.00 41.96 C
ATOM 14 N1 U B 428 81.746 21.310 41.134 1.00 41.67 N
ATOM 15 C2 U B 428 81.155 21.122 42.405 1.00 41.41 C
ATOM 16 O2 U B 428 80.604 22.018 43.041 1.00 41.41 O
ATOM 17 N3 U B 428 81.230 19.873 42.971 1.00 41.16 N
ATOM 18 C4 U B 428 81.852 18.794 42.396 1.00 41.15 C
ATOM 19 O4 U B 428 81.870 17.725 43.038 1.00 40.93 O
ATOM 20 C5 U B 428 82.422 19.049 41.077 1.00 41.42 C
ATOM 21 C6 U B 428 82.342 20.254 40.482 1.00 41.67 C
ATOM 22 P G B 429 86.087 24.167 40.825 1.00 44.72 P
ATOM 23 OP1 G B 429 87.083 25.168 40.317 1.00 45.13 O
ATOM 24 OP2 G B 429 86.361 22.701 40.625 1.00 44.52 O
ATOM 25 O5' G B 429 85.734 24.444 42.359 1.00 44.54 O
TER

Atoms:
OP1: (76.228,14.931,53.571)
OP2: (77.211,14.366,51.266)
C3': (76.076,19.343,50.811)
C1': (78.231,20.016,50.167)
C5': (76.948,17.922,52.794)
O4': (78.318,19.328,51.392)
C8: (78.664,17.782,49.224)
O2': (76.601,21.661,50.567)
C6: (79.985,18.248,46.038)
C5: (79.444,18.243,47.324)
C4: (79.184,19.446,47.918)
P: (77.130,15.302,52.437)
C4': (77.018,19.206,51.995)
C2': (76.783,20.397,49.979)
C2: (79.916,20.559,46.184)
N1: (80.238,19.470,45.473)
N3: (79.386,20.648,47.407)
N6: (80.239,17.109,45.394)
N7: (79.119,17.197,48.157)
N9: (78.691,19.127,49.118)
O5': (76.817,16.793,51.932)
O3': (74.790,19.754,51.197)
C4: (81.852,18.794,42.396)
N3: (81.230,19.873,42.971)
OP1: (86.045,20.811,36.493)
OP2: (85.366,19.016,38.212)
C2: (81.155,21.122,42.405)
C1': (81.628,22.641,40.485)
C3': (83.757,23.451,40.078)
O5': (84.375,21.336,38.286)
O4': (81.904,22.491,39.115)
C5': (83.839,22.527,37.725)
P: (85.004,20.206,37.371)
C4': (83.056,23.277,38.753)
C2': (82.622,23.652,41.035)
O2': (82.089,24.948,40.862)
N1: (81.746,21.310,41.134)
O4: (81.870,17.725,43.038)
O2: (80.604,22.018,43.041)
C6: (82.342,20.254,40.482)
C5: (82.422,19.049,41.077)
O3': (84.703,24.471,40.102)
Image (generated by PyMOL):
PyMOL image
show in jmol