ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SKW:A43:A50

Extra

PDB:
ATOM 1 O3' A A 42 11.059 18.465 14.438 1.00 53.94 O
ATOM 2 P A A 43 9.720 18.414 13.550 1.00 67.82 P
ATOM 3 OP1 A A 43 9.107 19.758 13.626 1.00 69.64 O
ATOM 4 OP2 A A 43 8.920 17.245 13.994 1.00 62.80 O
ATOM 5 O5' A A 43 10.288 18.167 12.091 1.00 41.63 O
ATOM 6 C5' A A 43 10.886 19.228 11.376 1.00 39.98 C
ATOM 7 C4' A A 43 11.532 18.746 10.114 1.00 44.38 C
ATOM 8 O4' A A 43 12.528 17.745 10.436 1.00 53.93 O
ATOM 9 C3' A A 43 10.627 18.030 9.128 1.00 44.94 C
ATOM 10 O3' A A 43 9.809 18.905 8.363 1.00 36.47 O
ATOM 11 C2' A A 43 11.640 17.252 8.302 1.00 52.52 C
ATOM 12 O2' A A 43 12.356 18.126 7.447 1.00 56.78 O
ATOM 13 C1' A A 43 12.593 16.788 9.393 1.00 53.78 C
ATOM 14 N9 A A 43 12.210 15.464 9.926 1.00 53.94 N
ATOM 15 C8 A A 43 11.581 15.095 11.099 1.00 55.90 C
ATOM 16 N7 A A 43 11.389 13.791 11.222 1.00 51.22 N
ATOM 17 C5 A A 43 11.922 13.285 10.055 1.00 47.37 C
ATOM 18 C6 A A 43 12.035 11.986 9.576 1.00 50.39 C
ATOM 19 N6 A A 43 11.599 10.914 10.232 1.00 51.72 N
ATOM 20 N1 A A 43 12.623 11.820 8.379 1.00 52.54 N
ATOM 21 C2 A A 43 13.062 12.901 7.723 1.00 52.41 C
ATOM 22 N3 A A 43 13.016 14.184 8.064 1.00 49.20 N
ATOM 23 C4 A A 43 12.427 14.295 9.258 1.00 49.51 C
ATOM 24 P A A 44 8.318 18.463 7.921 1.00 61.55 P
ATOM 25 OP1 A A 44 7.654 19.664 7.360 1.00 62.42 O
ATOM 26 OP2 A A 44 7.684 17.791 9.087 1.00 58.83 O
ATOM 27 O5' A A 44 8.597 17.410 6.750 1.00 31.33 O
TER

ATOM 1 O3' U B 49 12.329 2.968 3.436 1.00 57.11 O
ATOM 2 P U B 50 13.875 2.577 3.285 1.00 57.39 P
ATOM 3 OP1 U B 50 14.185 2.590 1.819 1.00 59.71 O
ATOM 4 OP2 U B 50 14.102 1.320 4.065 1.00 37.44 O
ATOM 5 O5' U B 50 14.591 3.810 4.014 1.00 72.45 O
ATOM 6 C5' U B 50 15.624 4.547 3.379 1.00 66.73 C
ATOM 7 C4' U B 50 15.294 6.019 3.262 1.00 60.75 C
ATOM 8 O4' U B 50 14.032 6.321 3.897 1.00 56.86 O
ATOM 9 C3' U B 50 16.238 6.971 3.951 1.00 63.97 C
ATOM 10 O3' U B 50 17.467 7.113 3.284 1.00 65.88 O
ATOM 11 C2' U B 50 15.416 8.245 4.012 1.00 61.35 C
ATOM 12 O2' U B 50 15.375 8.868 2.738 1.00 67.70 O
ATOM 13 C1' U B 50 14.031 7.678 4.304 1.00 50.12 C
ATOM 14 N1 U B 50 13.673 7.761 5.736 1.00 40.89 N
ATOM 15 C2 U B 50 13.419 9.013 6.269 1.00 49.57 C
ATOM 16 O2 U B 50 13.515 10.046 5.618 1.00 57.85 O
ATOM 17 N3 U B 50 13.064 9.038 7.599 1.00 44.67 N
ATOM 18 C4 U B 50 12.920 7.954 8.425 1.00 41.72 C
ATOM 19 O4 U B 50 12.580 8.122 9.590 1.00 46.70 O
ATOM 20 C5 U B 50 13.185 6.700 7.805 1.00 35.29 C
ATOM 21 C6 U B 50 13.544 6.650 6.519 1.00 35.94 C
ATOM 22 P U B 51 18.821 7.019 4.125 1.00 77.40 P
ATOM 23 OP1 U B 51 19.819 6.319 3.274 1.00 74.03 O
ATOM 24 OP2 U B 51 18.480 6.437 5.446 1.00 77.39 O
ATOM 25 O5' U B 51 19.203 8.546 4.298 1.00 53.52 O
TER

Atoms:
OP1: (9.107,19.758,13.626)
OP2: (8.920,17.245,13.994)
C3': (10.627,18.030,9.128)
C1': (12.593,16.788,9.393)
C5': (10.886,19.228,11.376)
O4': (12.528,17.745,10.436)
C8: (11.581,15.095,11.099)
O2': (12.356,18.126,7.447)
C6: (12.035,11.986,9.576)
C5: (11.922,13.285,10.055)
C4: (12.427,14.295,9.258)
P: (9.720,18.414,13.550)
C4': (11.532,18.746,10.114)
C2': (11.640,17.252,8.302)
C2: (13.062,12.901,7.723)
N1: (12.623,11.820,8.379)
N3: (13.016,14.184,8.064)
N6: (11.599,10.914,10.232)
N7: (11.389,13.791,11.222)
N9: (12.210,15.464,9.926)
O5': (10.288,18.167,12.091)
O3': (9.809,18.905,8.363)
C4: (12.920,7.954,8.425)
N3: (13.064,9.038,7.599)
OP1: (14.185,2.590,1.819)
OP2: (14.102,1.320,4.065)
C2: (13.419,9.013,6.269)
C1': (14.031,7.678,4.304)
C3': (16.238,6.971,3.951)
O5': (14.591,3.810,4.014)
O4': (14.032,6.321,3.897)
C5': (15.624,4.547,3.379)
P: (13.875,2.577,3.285)
C4': (15.294,6.019,3.262)
C2': (15.416,8.245,4.012)
O2': (15.375,8.868,2.738)
N1: (13.673,7.761,5.736)
O4: (12.580,8.122,9.590)
O2: (13.515,10.046,5.618)
C6: (13.544,6.650,6.519)
C5: (13.185,6.700,7.805)
O3': (17.467,7.113,3.284)
Image (generated by PyMOL):
PyMOL image
show in jmol