Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCM:0561:0572
Extra
PDB:
ATOM 1 O3' G A 560 -12.788 92.861 127.413 1.00 74.21 O
ATOM 2 P A A 561 -12.205 91.923 128.585 1.00 76.47 P
ATOM 3 OP1 A A 561 -13.085 92.102 129.771 1.00 75.41 O
ATOM 4 OP2 A A 561 -10.745 92.173 128.716 1.00 75.01 O
ATOM 5 O5' A A 561 -12.405 90.445 128.021 1.00 74.54 O
ATOM 6 C5' A A 561 -13.721 89.890 127.862 1.00 74.24 C
ATOM 7 C4' A A 561 -13.634 88.490 127.311 1.00 75.09 C
ATOM 8 O4' A A 561 -13.087 88.536 125.966 1.00 75.99 O
ATOM 9 C3' A A 561 -12.695 87.542 128.039 1.00 76.23 C
ATOM 10 O3' A A 561 -13.251 87.001 129.232 1.00 75.61 O
ATOM 11 C2' A A 561 -12.426 86.486 126.973 1.00 76.82 C
ATOM 12 O2' A A 561 -13.473 85.546 126.823 1.00 76.72 O
ATOM 13 C1' A A 561 -12.327 87.358 125.718 1.00 76.37 C
ATOM 14 N9 A A 561 -10.939 87.740 125.447 1.00 75.11 N
ATOM 15 C8 A A 561 -10.287 88.901 125.790 1.00 74.22 C
ATOM 16 N7 A A 561 -9.022 88.919 125.443 1.00 73.29 N
ATOM 17 C5 A A 561 -8.830 87.692 124.819 1.00 73.07 C
ATOM 18 C6 A A 561 -7.699 87.094 124.229 1.00 72.37 C
ATOM 19 N6 A A 561 -6.499 87.672 124.173 1.00 71.78 N
ATOM 20 N1 A A 561 -7.847 85.864 123.693 1.00 72.18 N
ATOM 21 C2 A A 561 -9.052 85.280 123.754 1.00 73.47 C
ATOM 22 N3 A A 561 -10.187 85.737 124.282 1.00 73.26 N
ATOM 23 C4 A A 561 -10.005 86.962 124.805 1.00 73.73 C
ATOM 24 P G A 562 -12.280 86.624 130.459 1.00 75.06 P
ATOM 25 OP1 G A 562 -13.145 86.165 131.569 1.00 76.84 O
ATOM 26 OP2 G A 562 -11.334 87.744 130.690 1.00 75.92 O
ATOM 27 O5' G A 562 -11.463 85.365 129.931 1.00 73.91 O
TER
ATOM 1 O3' C B 571 0.553 81.904 119.691 1.00 54.19 O
ATOM 2 P U B 572 -0.515 82.211 118.531 1.00 55.53 P
ATOM 3 OP1 U B 572 -0.214 81.316 117.383 1.00 54.73 O
ATOM 4 OP2 U B 572 -0.579 83.680 118.320 1.00 56.73 O
ATOM 5 O5' U B 572 -1.906 81.768 119.163 1.00 57.56 O
ATOM 6 C5' U B 572 -2.199 80.383 119.421 1.00 57.54 C
ATOM 7 C4' U B 572 -3.602 80.250 119.954 1.00 57.17 C
ATOM 8 O4' U B 572 -3.681 80.831 121.281 1.00 56.38 O
ATOM 9 C3' U B 572 -4.645 81.010 119.155 1.00 57.77 C
ATOM 10 O3' U B 572 -5.056 80.263 118.015 1.00 58.35 O
ATOM 11 C2' U B 572 -5.756 81.206 120.178 1.00 57.19 C
ATOM 12 O2' U B 572 -6.539 80.042 120.353 1.00 58.43 O
ATOM 13 C1' U B 572 -4.948 81.442 121.456 1.00 56.35 C
ATOM 14 N1 U B 572 -4.737 82.857 121.789 1.00 56.00 N
ATOM 15 C2 U B 572 -5.783 83.542 122.378 1.00 55.70 C
ATOM 16 O2 U B 572 -6.864 83.036 122.597 1.00 56.74 O
ATOM 17 N3 U B 572 -5.514 84.850 122.701 1.00 56.39 N
ATOM 18 C4 U B 572 -4.332 85.529 122.494 1.00 55.96 C
ATOM 19 O4 U B 572 -4.237 86.700 122.858 1.00 55.38 O
ATOM 20 C5 U B 572 -3.303 84.757 121.865 1.00 56.48 C
ATOM 21 C6 U B 572 -3.536 83.479 121.540 1.00 56.57 C
ATOM 22 P C B 573 -5.511 81.033 116.681 1.00 57.73 P
ATOM 23 OP1 C B 573 -5.798 79.990 115.661 1.00 54.53 O
ATOM 24 OP2 C B 573 -4.499 82.080 116.398 1.00 58.40 O
ATOM 25 O5' C B 573 -6.877 81.748 117.090 1.00 55.35 O
TER
ATOM 2 P A A 561 -12.205 91.923 128.585 1.00 76.47 P
ATOM 3 OP1 A A 561 -13.085 92.102 129.771 1.00 75.41 O
ATOM 4 OP2 A A 561 -10.745 92.173 128.716 1.00 75.01 O
ATOM 5 O5' A A 561 -12.405 90.445 128.021 1.00 74.54 O
ATOM 6 C5' A A 561 -13.721 89.890 127.862 1.00 74.24 C
ATOM 7 C4' A A 561 -13.634 88.490 127.311 1.00 75.09 C
ATOM 8 O4' A A 561 -13.087 88.536 125.966 1.00 75.99 O
ATOM 9 C3' A A 561 -12.695 87.542 128.039 1.00 76.23 C
ATOM 10 O3' A A 561 -13.251 87.001 129.232 1.00 75.61 O
ATOM 11 C2' A A 561 -12.426 86.486 126.973 1.00 76.82 C
ATOM 12 O2' A A 561 -13.473 85.546 126.823 1.00 76.72 O
ATOM 13 C1' A A 561 -12.327 87.358 125.718 1.00 76.37 C
ATOM 14 N9 A A 561 -10.939 87.740 125.447 1.00 75.11 N
ATOM 15 C8 A A 561 -10.287 88.901 125.790 1.00 74.22 C
ATOM 16 N7 A A 561 -9.022 88.919 125.443 1.00 73.29 N
ATOM 17 C5 A A 561 -8.830 87.692 124.819 1.00 73.07 C
ATOM 18 C6 A A 561 -7.699 87.094 124.229 1.00 72.37 C
ATOM 19 N6 A A 561 -6.499 87.672 124.173 1.00 71.78 N
ATOM 20 N1 A A 561 -7.847 85.864 123.693 1.00 72.18 N
ATOM 21 C2 A A 561 -9.052 85.280 123.754 1.00 73.47 C
ATOM 22 N3 A A 561 -10.187 85.737 124.282 1.00 73.26 N
ATOM 23 C4 A A 561 -10.005 86.962 124.805 1.00 73.73 C
ATOM 24 P G A 562 -12.280 86.624 130.459 1.00 75.06 P
ATOM 25 OP1 G A 562 -13.145 86.165 131.569 1.00 76.84 O
ATOM 26 OP2 G A 562 -11.334 87.744 130.690 1.00 75.92 O
ATOM 27 O5' G A 562 -11.463 85.365 129.931 1.00 73.91 O
TER
ATOM 1 O3' C B 571 0.553 81.904 119.691 1.00 54.19 O
ATOM 2 P U B 572 -0.515 82.211 118.531 1.00 55.53 P
ATOM 3 OP1 U B 572 -0.214 81.316 117.383 1.00 54.73 O
ATOM 4 OP2 U B 572 -0.579 83.680 118.320 1.00 56.73 O
ATOM 5 O5' U B 572 -1.906 81.768 119.163 1.00 57.56 O
ATOM 6 C5' U B 572 -2.199 80.383 119.421 1.00 57.54 C
ATOM 7 C4' U B 572 -3.602 80.250 119.954 1.00 57.17 C
ATOM 8 O4' U B 572 -3.681 80.831 121.281 1.00 56.38 O
ATOM 9 C3' U B 572 -4.645 81.010 119.155 1.00 57.77 C
ATOM 10 O3' U B 572 -5.056 80.263 118.015 1.00 58.35 O
ATOM 11 C2' U B 572 -5.756 81.206 120.178 1.00 57.19 C
ATOM 12 O2' U B 572 -6.539 80.042 120.353 1.00 58.43 O
ATOM 13 C1' U B 572 -4.948 81.442 121.456 1.00 56.35 C
ATOM 14 N1 U B 572 -4.737 82.857 121.789 1.00 56.00 N
ATOM 15 C2 U B 572 -5.783 83.542 122.378 1.00 55.70 C
ATOM 16 O2 U B 572 -6.864 83.036 122.597 1.00 56.74 O
ATOM 17 N3 U B 572 -5.514 84.850 122.701 1.00 56.39 N
ATOM 18 C4 U B 572 -4.332 85.529 122.494 1.00 55.96 C
ATOM 19 O4 U B 572 -4.237 86.700 122.858 1.00 55.38 O
ATOM 20 C5 U B 572 -3.303 84.757 121.865 1.00 56.48 C
ATOM 21 C6 U B 572 -3.536 83.479 121.540 1.00 56.57 C
ATOM 22 P C B 573 -5.511 81.033 116.681 1.00 57.73 P
ATOM 23 OP1 C B 573 -5.798 79.990 115.661 1.00 54.53 O
ATOM 24 OP2 C B 573 -4.499 82.080 116.398 1.00 58.40 O
ATOM 25 O5' C B 573 -6.877 81.748 117.090 1.00 55.35 O
TER
Atoms:
OP1: (-13.085,92.102,129.771)
OP2: (-10.745,92.173,128.716)
C3': (-12.695,87.542,128.039)
C1': (-12.327,87.358,125.718)
C5': (-13.721,89.890,127.862)
O4': (-13.087,88.536,125.966)
C8: (-10.287,88.901,125.790)
O2': (-13.473,85.546,126.823)
C6: (-7.699,87.094,124.229)
C5: (-8.830,87.692,124.819)
C4: (-10.005,86.962,124.805)
P: (-12.205,91.923,128.585)
C4': (-13.634,88.490,127.311)
C2': (-12.426,86.486,126.973)
C2: (-9.052,85.280,123.754)
N1: (-7.847,85.864,123.693)
N3: (-10.187,85.737,124.282)
N6: (-6.499,87.672,124.173)
N7: (-9.022,88.919,125.443)
N9: (-10.939,87.740,125.447)
O5': (-12.405,90.445,128.021)
O3': (-13.251,87.001,129.232)
OP2: (-10.745,92.173,128.716)
C3': (-12.695,87.542,128.039)
C1': (-12.327,87.358,125.718)
C5': (-13.721,89.890,127.862)
O4': (-13.087,88.536,125.966)
C8: (-10.287,88.901,125.790)
O2': (-13.473,85.546,126.823)
C6: (-7.699,87.094,124.229)
C5: (-8.830,87.692,124.819)
C4: (-10.005,86.962,124.805)
P: (-12.205,91.923,128.585)
C4': (-13.634,88.490,127.311)
C2': (-12.426,86.486,126.973)
C2: (-9.052,85.280,123.754)
N1: (-7.847,85.864,123.693)
N3: (-10.187,85.737,124.282)
N6: (-6.499,87.672,124.173)
N7: (-9.022,88.919,125.443)
N9: (-10.939,87.740,125.447)
O5': (-12.405,90.445,128.021)
O3': (-13.251,87.001,129.232)
C4: (-4.332,85.529,122.494)
N3: (-5.514,84.850,122.701)
OP1: (-0.214,81.316,117.383)
OP2: (-0.579,83.680,118.320)
C2: (-5.783,83.542,122.378)
C1': (-4.948,81.442,121.456)
C3': (-4.645,81.010,119.155)
O5': (-1.906,81.768,119.163)
O4': (-3.681,80.831,121.281)
C5': (-2.199,80.383,119.421)
P: (-0.515,82.211,118.531)
C4': (-3.602,80.250,119.954)
C2': (-5.756,81.206,120.178)
O2': (-6.539,80.042,120.353)
N1: (-4.737,82.857,121.789)
O4: (-4.237,86.700,122.858)
O2: (-6.864,83.036,122.597)
C6: (-3.536,83.479,121.540)
C5: (-3.303,84.757,121.865)
O3': (-5.056,80.263,118.015)
N3: (-5.514,84.850,122.701)
OP1: (-0.214,81.316,117.383)
OP2: (-0.579,83.680,118.320)
C2: (-5.783,83.542,122.378)
C1': (-4.948,81.442,121.456)
C3': (-4.645,81.010,119.155)
O5': (-1.906,81.768,119.163)
O4': (-3.681,80.831,121.281)
C5': (-2.199,80.383,119.421)
P: (-0.515,82.211,118.531)
C4': (-3.602,80.250,119.954)
C2': (-5.756,81.206,120.178)
O2': (-6.539,80.042,120.353)
N1: (-4.737,82.857,121.789)
O4: (-4.237,86.700,122.858)
O2: (-6.864,83.036,122.597)
C6: (-3.536,83.479,121.540)
C5: (-3.303,84.757,121.865)
O3': (-5.056,80.263,118.015)
Image (generated by PyMOL):