Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZBH:E10:E5
Extra
PDB:
ATOM 1 O3' C A 9 6.307 -20.572 20.718 1.00 49.03 O
ATOM 2 P A A 10 6.245 -21.408 22.090 1.00 48.90 P
ATOM 3 OP1 A A 10 7.635 -21.581 22.570 1.00 48.78 O
ATOM 4 OP2 A A 10 5.411 -22.605 21.844 1.00 48.87 O
ATOM 5 O5' A A 10 5.440 -20.472 23.110 1.00 48.72 O
ATOM 6 C5' A A 10 6.064 -19.363 23.747 1.00 48.66 C
ATOM 7 C4' A A 10 5.034 -18.537 24.489 1.00 48.69 C
ATOM 8 O4' A A 10 3.867 -18.312 23.658 1.00 48.73 O
ATOM 9 C3' A A 10 4.474 -19.214 25.727 1.00 48.74 C
ATOM 10 O3' A A 10 5.362 -19.072 26.821 1.00 48.60 O
ATOM 11 C2' A A 10 3.167 -18.453 25.906 1.00 48.86 C
ATOM 12 O2' A A 10 3.339 -17.148 26.427 1.00 48.91 O
ATOM 13 C1' A A 10 2.696 -18.387 24.456 1.00 49.02 C
ATOM 14 N9 A A 10 1.878 -19.534 24.043 1.00 49.12 N
ATOM 15 C8 A A 10 2.225 -20.524 23.162 1.00 49.18 C
ATOM 16 N7 A A 10 1.296 -21.431 22.972 1.00 49.17 N
ATOM 17 C5 A A 10 0.261 -21.012 23.789 1.00 49.18 C
ATOM 18 C6 A A 10 -1.022 -21.545 24.045 1.00 49.15 C
ATOM 19 N6 A A 10 -1.478 -22.662 23.471 1.00 49.13 N
ATOM 20 N1 A A 10 -1.820 -20.885 24.916 1.00 49.16 N
ATOM 21 C2 A A 10 -1.359 -19.763 25.491 1.00 49.18 C
ATOM 22 N3 A A 10 -0.175 -19.167 25.328 1.00 49.16 N
ATOM 23 C4 A A 10 0.600 -19.846 24.459 1.00 49.17 C
ATOM 24 P G A 11 5.474 -20.241 27.910 1.00 48.61 P
ATOM 25 OP1 G A 11 6.746 -20.055 28.636 1.00 48.51 O
ATOM 26 OP2 G A 11 5.200 -21.539 27.249 1.00 48.47 O
ATOM 27 O5' G A 11 4.257 -19.915 28.900 1.00 48.78 O
TER
ATOM 1 O3' C B 4 -11.297 -22.247 28.906 1.00 49.59 O
ATOM 2 P U B 5 -11.329 -21.377 27.562 1.00 49.70 P
ATOM 3 OP1 U B 5 -12.608 -20.631 27.537 1.00 49.69 O
ATOM 4 OP2 U B 5 -10.971 -22.251 26.420 1.00 49.65 O
ATOM 5 O5' U B 5 -10.119 -20.353 27.785 1.00 49.73 O
ATOM 6 C5' U B 5 -10.125 -19.421 28.869 1.00 49.70 C
ATOM 7 C4' U B 5 -8.779 -18.731 29.005 1.00 49.67 C
ATOM 8 O4' U B 5 -7.759 -19.717 29.312 1.00 49.60 O
ATOM 9 C3' U B 5 -8.271 -18.040 27.746 1.00 49.68 C
ATOM 10 O3' U B 5 -8.815 -16.726 27.620 1.00 49.74 O
ATOM 11 C2' U B 5 -6.763 -18.036 27.978 1.00 49.59 C
ATOM 12 O2' U B 5 -6.331 -17.006 28.846 1.00 49.42 O
ATOM 13 C1' U B 5 -6.552 -19.401 28.635 1.00 49.58 C
ATOM 14 N1 U B 5 -6.174 -20.506 27.667 1.00 49.62 N
ATOM 15 C2 U B 5 -4.891 -20.551 27.136 1.00 49.60 C
ATOM 16 O2 U B 5 -4.015 -19.743 27.396 1.00 49.60 O
ATOM 17 N3 U B 5 -4.655 -21.595 26.269 1.00 49.58 N
ATOM 18 C4 U B 5 -5.549 -22.582 25.884 1.00 49.59 C
ATOM 19 O4 U B 5 -5.192 -23.453 25.099 1.00 49.60 O
ATOM 20 C5 U B 5 -6.861 -22.476 26.472 1.00 49.61 C
ATOM 21 C6 U B 5 -7.113 -21.468 27.319 1.00 49.63 C
ATOM 22 P U B 6 -9.582 -16.268 26.286 1.00 49.80 P
ATOM 23 OP1 U B 6 -10.977 -15.944 26.661 1.00 49.81 O
ATOM 24 OP2 U B 6 -9.324 -17.258 25.213 1.00 49.73 O
ATOM 25 O5' U B 6 -8.831 -14.905 25.915 1.00 49.77 O
TER
ATOM 2 P A A 10 6.245 -21.408 22.090 1.00 48.90 P
ATOM 3 OP1 A A 10 7.635 -21.581 22.570 1.00 48.78 O
ATOM 4 OP2 A A 10 5.411 -22.605 21.844 1.00 48.87 O
ATOM 5 O5' A A 10 5.440 -20.472 23.110 1.00 48.72 O
ATOM 6 C5' A A 10 6.064 -19.363 23.747 1.00 48.66 C
ATOM 7 C4' A A 10 5.034 -18.537 24.489 1.00 48.69 C
ATOM 8 O4' A A 10 3.867 -18.312 23.658 1.00 48.73 O
ATOM 9 C3' A A 10 4.474 -19.214 25.727 1.00 48.74 C
ATOM 10 O3' A A 10 5.362 -19.072 26.821 1.00 48.60 O
ATOM 11 C2' A A 10 3.167 -18.453 25.906 1.00 48.86 C
ATOM 12 O2' A A 10 3.339 -17.148 26.427 1.00 48.91 O
ATOM 13 C1' A A 10 2.696 -18.387 24.456 1.00 49.02 C
ATOM 14 N9 A A 10 1.878 -19.534 24.043 1.00 49.12 N
ATOM 15 C8 A A 10 2.225 -20.524 23.162 1.00 49.18 C
ATOM 16 N7 A A 10 1.296 -21.431 22.972 1.00 49.17 N
ATOM 17 C5 A A 10 0.261 -21.012 23.789 1.00 49.18 C
ATOM 18 C6 A A 10 -1.022 -21.545 24.045 1.00 49.15 C
ATOM 19 N6 A A 10 -1.478 -22.662 23.471 1.00 49.13 N
ATOM 20 N1 A A 10 -1.820 -20.885 24.916 1.00 49.16 N
ATOM 21 C2 A A 10 -1.359 -19.763 25.491 1.00 49.18 C
ATOM 22 N3 A A 10 -0.175 -19.167 25.328 1.00 49.16 N
ATOM 23 C4 A A 10 0.600 -19.846 24.459 1.00 49.17 C
ATOM 24 P G A 11 5.474 -20.241 27.910 1.00 48.61 P
ATOM 25 OP1 G A 11 6.746 -20.055 28.636 1.00 48.51 O
ATOM 26 OP2 G A 11 5.200 -21.539 27.249 1.00 48.47 O
ATOM 27 O5' G A 11 4.257 -19.915 28.900 1.00 48.78 O
TER
ATOM 1 O3' C B 4 -11.297 -22.247 28.906 1.00 49.59 O
ATOM 2 P U B 5 -11.329 -21.377 27.562 1.00 49.70 P
ATOM 3 OP1 U B 5 -12.608 -20.631 27.537 1.00 49.69 O
ATOM 4 OP2 U B 5 -10.971 -22.251 26.420 1.00 49.65 O
ATOM 5 O5' U B 5 -10.119 -20.353 27.785 1.00 49.73 O
ATOM 6 C5' U B 5 -10.125 -19.421 28.869 1.00 49.70 C
ATOM 7 C4' U B 5 -8.779 -18.731 29.005 1.00 49.67 C
ATOM 8 O4' U B 5 -7.759 -19.717 29.312 1.00 49.60 O
ATOM 9 C3' U B 5 -8.271 -18.040 27.746 1.00 49.68 C
ATOM 10 O3' U B 5 -8.815 -16.726 27.620 1.00 49.74 O
ATOM 11 C2' U B 5 -6.763 -18.036 27.978 1.00 49.59 C
ATOM 12 O2' U B 5 -6.331 -17.006 28.846 1.00 49.42 O
ATOM 13 C1' U B 5 -6.552 -19.401 28.635 1.00 49.58 C
ATOM 14 N1 U B 5 -6.174 -20.506 27.667 1.00 49.62 N
ATOM 15 C2 U B 5 -4.891 -20.551 27.136 1.00 49.60 C
ATOM 16 O2 U B 5 -4.015 -19.743 27.396 1.00 49.60 O
ATOM 17 N3 U B 5 -4.655 -21.595 26.269 1.00 49.58 N
ATOM 18 C4 U B 5 -5.549 -22.582 25.884 1.00 49.59 C
ATOM 19 O4 U B 5 -5.192 -23.453 25.099 1.00 49.60 O
ATOM 20 C5 U B 5 -6.861 -22.476 26.472 1.00 49.61 C
ATOM 21 C6 U B 5 -7.113 -21.468 27.319 1.00 49.63 C
ATOM 22 P U B 6 -9.582 -16.268 26.286 1.00 49.80 P
ATOM 23 OP1 U B 6 -10.977 -15.944 26.661 1.00 49.81 O
ATOM 24 OP2 U B 6 -9.324 -17.258 25.213 1.00 49.73 O
ATOM 25 O5' U B 6 -8.831 -14.905 25.915 1.00 49.77 O
TER
Atoms:
OP1: (7.635,-21.581,22.570)
OP2: (5.411,-22.605,21.844)
C3': (4.474,-19.214,25.727)
C1': (2.696,-18.387,24.456)
C5': (6.064,-19.363,23.747)
O4': (3.867,-18.312,23.658)
C8: (2.225,-20.524,23.162)
O2': (3.339,-17.148,26.427)
C6: (-1.022,-21.545,24.045)
C5: (0.261,-21.012,23.789)
C4: (0.600,-19.846,24.459)
P: (6.245,-21.408,22.090)
C4': (5.034,-18.537,24.489)
C2': (3.167,-18.453,25.906)
C2: (-1.359,-19.763,25.491)
N1: (-1.820,-20.885,24.916)
N3: (-0.175,-19.167,25.328)
N6: (-1.478,-22.662,23.471)
N7: (1.296,-21.431,22.972)
N9: (1.878,-19.534,24.043)
O5': (5.440,-20.472,23.110)
O3': (5.362,-19.072,26.821)
OP2: (5.411,-22.605,21.844)
C3': (4.474,-19.214,25.727)
C1': (2.696,-18.387,24.456)
C5': (6.064,-19.363,23.747)
O4': (3.867,-18.312,23.658)
C8: (2.225,-20.524,23.162)
O2': (3.339,-17.148,26.427)
C6: (-1.022,-21.545,24.045)
C5: (0.261,-21.012,23.789)
C4: (0.600,-19.846,24.459)
P: (6.245,-21.408,22.090)
C4': (5.034,-18.537,24.489)
C2': (3.167,-18.453,25.906)
C2: (-1.359,-19.763,25.491)
N1: (-1.820,-20.885,24.916)
N3: (-0.175,-19.167,25.328)
N6: (-1.478,-22.662,23.471)
N7: (1.296,-21.431,22.972)
N9: (1.878,-19.534,24.043)
O5': (5.440,-20.472,23.110)
O3': (5.362,-19.072,26.821)
C4: (-5.549,-22.582,25.884)
N3: (-4.655,-21.595,26.269)
OP1: (-12.608,-20.631,27.537)
OP2: (-10.971,-22.251,26.420)
C2: (-4.891,-20.551,27.136)
C1': (-6.552,-19.401,28.635)
C3': (-8.271,-18.040,27.746)
O5': (-10.119,-20.353,27.785)
O4': (-7.759,-19.717,29.312)
C5': (-10.125,-19.421,28.869)
P: (-11.329,-21.377,27.562)
C4': (-8.779,-18.731,29.005)
C2': (-6.763,-18.036,27.978)
O2': (-6.331,-17.006,28.846)
N1: (-6.174,-20.506,27.667)
O4: (-5.192,-23.453,25.099)
O2: (-4.015,-19.743,27.396)
C6: (-7.113,-21.468,27.319)
C5: (-6.861,-22.476,26.472)
O3': (-8.815,-16.726,27.620)
N3: (-4.655,-21.595,26.269)
OP1: (-12.608,-20.631,27.537)
OP2: (-10.971,-22.251,26.420)
C2: (-4.891,-20.551,27.136)
C1': (-6.552,-19.401,28.635)
C3': (-8.271,-18.040,27.746)
O5': (-10.119,-20.353,27.785)
O4': (-7.759,-19.717,29.312)
C5': (-10.125,-19.421,28.869)
P: (-11.329,-21.377,27.562)
C4': (-8.779,-18.731,29.005)
C2': (-6.763,-18.036,27.978)
O2': (-6.331,-17.006,28.846)
N1: (-6.174,-20.506,27.667)
O4: (-5.192,-23.453,25.099)
O2: (-4.015,-19.743,27.396)
C6: (-7.113,-21.468,27.319)
C5: (-6.861,-22.476,26.472)
O3': (-8.815,-16.726,27.620)
Image (generated by PyMOL):