ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCU:01245:01229

Extra

PDB:
ATOM 1 O3' U A1244 8.391 82.841 84.215 1.00 39.31 O
ATOM 2 P A A1245 8.836 83.701 85.488 1.00 40.01 P
ATOM 3 OP1 A A1245 8.772 82.805 86.664 1.00 36.66 O
ATOM 4 OP2 A A1245 8.087 84.989 85.497 1.00 36.91 O
ATOM 5 O5' A A1245 10.360 84.028 85.186 1.00 40.64 O
ATOM 6 C5' A A1245 11.384 83.045 85.389 1.00 39.95 C
ATOM 7 C4' A A1245 12.736 83.709 85.361 1.00 41.26 C
ATOM 8 O4' A A1245 13.018 84.208 84.027 1.00 43.52 O
ATOM 9 C3' A A1245 12.842 84.953 86.218 1.00 40.78 C
ATOM 10 O3' A A1245 13.041 84.617 87.573 1.00 39.43 O
ATOM 11 C2' A A1245 14.040 85.660 85.604 1.00 41.14 C
ATOM 12 O2' A A1245 15.267 85.078 85.990 1.00 41.52 O
ATOM 13 C1' A A1245 13.818 85.374 84.119 1.00 42.17 C
ATOM 14 N9 A A1245 13.143 86.463 83.419 1.00 43.06 N
ATOM 15 C8 A A1245 11.818 86.803 83.448 1.00 43.37 C
ATOM 16 N7 A A1245 11.526 87.854 82.720 1.00 45.10 N
ATOM 17 C5 A A1245 12.745 88.228 82.169 1.00 44.23 C
ATOM 18 C6 A A1245 13.117 89.274 81.303 1.00 42.84 C
ATOM 19 N6 A A1245 12.260 90.167 80.805 1.00 41.04 N
ATOM 20 N1 A A1245 14.416 89.369 80.957 1.00 42.87 N
ATOM 21 C2 A A1245 15.276 88.467 81.442 1.00 43.87 C
ATOM 22 N3 A A1245 15.052 87.440 82.254 1.00 44.88 N
ATOM 23 C4 A A1245 13.749 87.376 82.588 1.00 44.89 C
ATOM 24 P A A1246 11.934 85.022 88.647 1.00 39.31 P
ATOM 25 OP1 A A1246 10.730 84.224 88.332 1.00 42.66 O
ATOM 26 OP2 A A1246 11.837 86.490 88.694 1.00 39.72 O
ATOM 27 O5' A A1246 12.535 84.483 90.013 1.00 38.94 O
TER

ATOM 1 O3' G B1228 16.610 98.044 75.792 1.00 31.22 O
ATOM 2 P U B1229 16.540 96.875 74.703 1.00 30.43 P
ATOM 3 OP1 U B1229 17.308 97.311 73.522 1.00 29.50 O
ATOM 4 OP2 U B1229 15.113 96.498 74.548 1.00 34.42 O
ATOM 5 O5' U B1229 17.309 95.664 75.392 1.00 30.81 O
ATOM 6 C5' U B1229 18.724 95.712 75.586 1.00 32.20 C
ATOM 7 C4' U B1229 19.194 94.461 76.279 1.00 33.96 C
ATOM 8 O4' U B1229 18.662 94.424 77.629 1.00 35.43 O
ATOM 9 C3' U B1229 18.710 93.161 75.672 1.00 34.12 C
ATOM 10 O3' U B1229 19.466 92.758 74.546 1.00 36.44 O
ATOM 11 C2' U B1229 18.866 92.200 76.837 1.00 34.89 C
ATOM 12 O2' U B1229 20.214 91.837 77.050 1.00 30.37 O
ATOM 13 C1' U B1229 18.385 93.075 77.995 1.00 36.94 C
ATOM 14 N1 U B1229 16.936 92.941 78.220 1.00 38.74 N
ATOM 15 C2 U B1229 16.486 91.902 79.024 1.00 38.60 C
ATOM 16 O2 U B1229 17.228 91.106 79.560 1.00 40.25 O
ATOM 17 N3 U B1229 15.126 91.834 79.175 1.00 38.35 N
ATOM 18 C4 U B1229 14.190 92.672 78.618 1.00 39.12 C
ATOM 19 O4 U B1229 12.999 92.460 78.819 1.00 41.23 O
ATOM 20 C5 U B1229 14.727 93.720 77.811 1.00 40.29 C
ATOM 21 C6 U B1229 16.048 93.818 77.643 1.00 39.80 C
ATOM 22 P A B1230 18.788 91.800 73.449 1.00 37.64 P
ATOM 23 OP1 A B1230 19.727 91.659 72.312 1.00 38.98 O
ATOM 24 OP2 A B1230 17.419 92.320 73.211 1.00 37.48 O
ATOM 25 O5' A B1230 18.701 90.378 74.163 1.00 36.23 O
TER

Atoms:
OP1: (8.772,82.805,86.664)
OP2: (8.087,84.989,85.497)
C3': (12.842,84.953,86.218)
C1': (13.818,85.374,84.119)
C5': (11.384,83.045,85.389)
O4': (13.018,84.208,84.027)
C8: (11.818,86.803,83.448)
O2': (15.267,85.078,85.990)
C6: (13.117,89.274,81.303)
C5: (12.745,88.228,82.169)
C4: (13.749,87.376,82.588)
P: (8.836,83.701,85.488)
C4': (12.736,83.709,85.361)
C2': (14.040,85.660,85.604)
C2: (15.276,88.467,81.442)
N1: (14.416,89.369,80.957)
N3: (15.052,87.440,82.254)
N6: (12.260,90.167,80.805)
N7: (11.526,87.854,82.720)
N9: (13.143,86.463,83.419)
O5': (10.360,84.028,85.186)
O3': (13.041,84.617,87.573)
C4: (14.190,92.672,78.618)
N3: (15.126,91.834,79.175)
OP1: (17.308,97.311,73.522)
OP2: (15.113,96.498,74.548)
C2: (16.486,91.902,79.024)
C1': (18.385,93.075,77.995)
C3': (18.710,93.161,75.672)
O5': (17.309,95.664,75.392)
O4': (18.662,94.424,77.629)
C5': (18.724,95.712,75.586)
P: (16.540,96.875,74.703)
C4': (19.194,94.461,76.279)
C2': (18.866,92.200,76.837)
O2': (20.214,91.837,77.050)
N1: (16.936,92.941,78.220)
O4: (12.999,92.460,78.819)
O2: (17.228,91.106,79.560)
C6: (16.048,93.818,77.643)
C5: (14.727,93.720,77.811)
O3': (19.466,92.758,74.546)
Image (generated by PyMOL):
PyMOL image
show in jmol