ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01424:01437

Extra

PDB:
ATOM 1 O3' C A1423 90.512 139.987 33.656 1.00 38.08 O
ATOM 2 P A A1424 90.789 138.409 33.603 1.00 37.40 P
ATOM 3 OP1 A A1424 90.123 137.874 32.398 1.00 36.68 O
ATOM 4 OP2 A A1424 90.465 137.846 34.939 1.00 37.64 O
ATOM 5 O5' A A1424 92.361 138.288 33.390 1.00 38.38 O
ATOM 6 C5' A A1424 92.977 138.765 32.184 1.00 37.73 C
ATOM 7 C4' A A1424 94.479 138.628 32.272 1.00 38.58 C
ATOM 8 O4' A A1424 94.983 139.454 33.354 1.00 38.30 O
ATOM 9 C3' A A1424 95.014 137.248 32.609 1.00 39.08 C
ATOM 10 O3' A A1424 95.058 136.402 31.470 1.00 40.46 O
ATOM 11 C2' A A1424 96.409 137.575 33.110 1.00 38.47 C
ATOM 12 O2' A A1424 97.262 137.861 32.023 1.00 38.55 O
ATOM 13 C1' A A1424 96.145 138.858 33.903 1.00 36.94 C
ATOM 14 N9 A A1424 95.904 138.626 35.324 1.00 36.15 N
ATOM 15 C8 A A1424 94.694 138.583 35.967 1.00 37.50 C
ATOM 16 N7 A A1424 94.786 138.371 37.257 1.00 37.58 N
ATOM 17 C5 A A1424 96.149 138.264 37.481 1.00 35.44 C
ATOM 18 C6 A A1424 96.899 138.039 38.648 1.00 36.15 C
ATOM 19 N6 A A1424 96.359 137.890 39.861 1.00 33.13 N
ATOM 20 N1 A A1424 98.242 137.977 38.526 1.00 36.73 N
ATOM 21 C2 A A1424 98.784 138.140 37.312 1.00 35.98 C
ATOM 22 N3 A A1424 98.186 138.363 36.144 1.00 35.86 N
ATOM 23 C4 A A1424 96.852 138.414 36.298 1.00 36.57 C
ATOM 24 P C A1425 94.728 134.838 31.630 1.00 41.86 P
ATOM 25 OP1 C A1425 94.814 134.239 30.271 1.00 42.23 O
ATOM 26 OP2 C A1425 93.467 134.718 32.412 1.00 40.59 O
ATOM 27 O5' C A1425 95.936 134.270 32.499 1.00 39.03 O
TER

ATOM 1 O3' C B1436 103.995 136.838 46.528 1.00 44.30 O
ATOM 2 P U B1437 104.216 138.387 46.162 1.00 44.72 P
ATOM 3 OP1 U B1437 105.518 138.774 46.758 1.00 43.77 O
ATOM 4 OP2 U B1437 102.993 139.159 46.514 1.00 41.46 O
ATOM 5 O5' U B1437 104.369 138.377 44.576 1.00 43.31 O
ATOM 6 C5' U B1437 105.528 137.797 43.958 1.00 44.23 C
ATOM 7 C4' U B1437 105.372 137.776 42.455 1.00 45.56 C
ATOM 8 O4' U B1437 104.291 136.884 42.076 1.00 45.42 O
ATOM 9 C3' U B1437 104.997 139.094 41.805 1.00 47.40 C
ATOM 10 O3' U B1437 106.123 139.944 41.641 1.00 50.76 O
ATOM 11 C2' U B1437 104.414 138.634 40.478 1.00 47.01 C
ATOM 12 O2' U B1437 105.413 138.273 39.547 1.00 47.25 O
ATOM 13 C1' U B1437 103.650 137.381 40.912 1.00 44.59 C
ATOM 14 N1 U B1437 102.241 137.654 41.239 1.00 43.86 N
ATOM 15 C2 U B1437 101.311 137.603 40.208 1.00 44.34 C
ATOM 16 O2 U B1437 101.608 137.366 39.045 1.00 43.12 O
ATOM 17 N3 U B1437 100.017 137.846 40.591 1.00 43.06 N
ATOM 18 C4 U B1437 99.565 138.140 41.858 1.00 42.91 C
ATOM 19 O4 U B1437 98.362 138.334 42.038 1.00 46.08 O
ATOM 20 C5 U B1437 100.581 138.188 42.860 1.00 40.61 C
ATOM 21 C6 U B1437 101.849 137.949 42.527 1.00 42.23 C
ATOM 22 P G B1438 105.933 141.539 41.715 1.00 53.55 P
ATOM 23 OP1 G B1438 107.303 142.111 41.684 1.00 54.54 O
ATOM 24 OP2 G B1438 105.010 141.900 42.828 1.00 51.06 O
ATOM 25 O5' G B1438 105.189 141.886 40.349 1.00 54.14 O
TER

Atoms:
OP1: (90.123,137.874,32.398)
OP2: (90.465,137.846,34.939)
C3': (95.014,137.248,32.609)
C1': (96.145,138.858,33.903)
C5': (92.977,138.765,32.184)
O4': (94.983,139.454,33.354)
C8: (94.694,138.583,35.967)
O2': (97.262,137.861,32.023)
C6: (96.899,138.039,38.648)
C5: (96.149,138.264,37.481)
C4: (96.852,138.414,36.298)
P: (90.789,138.409,33.603)
C4': (94.479,138.628,32.272)
C2': (96.409,137.575,33.110)
C2: (98.784,138.140,37.312)
N1: (98.242,137.977,38.526)
N3: (98.186,138.363,36.144)
N6: (96.359,137.890,39.861)
N7: (94.786,138.371,37.257)
N9: (95.904,138.626,35.324)
O5': (92.361,138.288,33.390)
O3': (95.058,136.402,31.470)
C4: (99.565,138.140,41.858)
N3: (100.017,137.846,40.591)
OP1: (105.518,138.774,46.758)
OP2: (102.993,139.159,46.514)
C2: (101.311,137.603,40.208)
C1': (103.650,137.381,40.912)
C3': (104.997,139.094,41.805)
O5': (104.369,138.377,44.576)
O4': (104.291,136.884,42.076)
C5': (105.528,137.797,43.958)
P: (104.216,138.387,46.162)
C4': (105.372,137.776,42.455)
C2': (104.414,138.634,40.478)
O2': (105.413,138.273,39.547)
N1: (102.241,137.654,41.239)
O4: (98.362,138.334,42.038)
O2: (101.608,137.366,39.045)
C6: (101.849,137.949,42.527)
C5: (100.581,138.188,42.860)
O3': (106.123,139.944,41.641)
Image (generated by PyMOL):
PyMOL image
show in jmol