Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:D4:E86
Extra
PDB:
ATOM 1 O3' C A 3 -12.145 36.414 109.071 1.00153.12 O
ATOM 2 P A A 4 -10.927 36.043 110.051 1.00150.78 P
ATOM 3 OP1 A A 4 -9.671 36.060 109.261 1.00152.61 O
ATOM 4 OP2 A A 4 -11.310 34.813 110.790 1.00151.01 O
ATOM 5 O5' A A 4 -10.891 37.258 111.082 1.00150.38 O
ATOM 6 C5' A A 4 -10.594 38.576 110.631 1.00148.19 C
ATOM 7 C4' A A 4 -10.724 39.571 111.762 1.00146.27 C
ATOM 8 O4' A A 4 -12.110 39.668 112.182 1.00143.94 O
ATOM 9 C3' A A 4 -9.985 39.241 113.048 1.00144.41 C
ATOM 10 O3' A A 4 -8.607 39.581 112.961 1.00144.50 O
ATOM 11 C2' A A 4 -10.719 40.118 114.054 1.00143.86 C
ATOM 12 O2' A A 4 -10.318 41.472 114.003 1.00141.51 O
ATOM 13 C1' A A 4 -12.163 39.991 113.563 1.00142.92 C
ATOM 14 N9 A A 4 -12.885 38.930 114.259 1.00142.25 N
ATOM 15 C8 A A 4 -13.138 37.649 113.832 1.00141.77 C
ATOM 16 N7 A A 4 -13.805 36.926 114.698 1.00141.51 N
ATOM 17 C5 A A 4 -14.008 37.789 115.767 1.00141.54 C
ATOM 18 C6 A A 4 -14.653 37.627 117.006 1.00141.01 C
ATOM 19 N6 A A 4 -15.238 36.491 117.393 1.00140.54 N
ATOM 20 N1 A A 4 -14.675 38.686 117.845 1.00140.70 N
ATOM 21 C2 A A 4 -14.087 39.825 117.456 1.00140.70 C
ATOM 22 N3 A A 4 -13.451 40.100 116.319 1.00140.88 N
ATOM 23 C4 A A 4 -13.447 39.027 115.509 1.00141.68 C
ATOM 24 P C A 5 -7.524 38.712 113.769 1.00143.89 P
ATOM 25 OP1 C A 5 -6.175 39.066 113.261 1.00145.43 O
ATOM 26 OP2 C A 5 -7.975 37.297 113.730 1.00142.72 O
ATOM 27 O5' C A 5 -7.652 39.233 115.270 1.00143.38 O
TER
ATOM 1 O3' G B 85 -17.067 36.844 127.464 1.00128.73 O
ATOM 2 P U B 86 -18.586 37.223 127.106 1.00131.98 P
ATOM 3 OP1 U B 86 -19.451 36.777 128.228 1.00134.23 O
ATOM 4 OP2 U B 86 -18.859 36.736 125.728 1.00129.59 O
ATOM 5 O5' U B 86 -18.582 38.812 127.074 1.00134.54 O
ATOM 6 C5' U B 86 -19.021 39.512 125.921 1.00137.21 C
ATOM 7 C4' U B 86 -17.972 40.502 125.485 1.00138.87 C
ATOM 8 O4' U B 86 -16.724 39.805 125.219 1.00138.51 O
ATOM 9 C3' U B 86 -18.288 41.208 124.182 1.00140.64 C
ATOM 10 O3' U B 86 -19.130 42.322 124.413 1.00143.65 O
ATOM 11 C2' U B 86 -16.905 41.613 123.698 1.00140.30 C
ATOM 12 O2' U B 86 -16.408 42.752 124.371 1.00142.01 O
ATOM 13 C1' U B 86 -16.091 40.378 124.085 1.00138.89 C
ATOM 14 N1 U B 86 -16.073 39.365 123.020 1.00138.29 N
ATOM 15 C2 U B 86 -15.422 39.678 121.841 1.00137.94 C
ATOM 16 O2 U B 86 -14.864 40.746 121.655 1.00136.98 O
ATOM 17 N3 U B 86 -15.452 38.692 120.886 1.00137.88 N
ATOM 18 C4 U B 86 -16.052 37.451 120.989 1.00137.91 C
ATOM 19 O4 U B 86 -15.994 36.668 120.040 1.00137.36 O
ATOM 20 C5 U B 86 -16.700 37.205 122.240 1.00137.99 C
ATOM 21 C6 U B 86 -16.688 38.146 123.189 1.00138.33 C
ATOM 22 P G B 87 -20.356 42.596 123.422 1.00147.53 P
ATOM 23 OP1 G B 87 -21.146 43.734 123.956 1.00150.20 O
ATOM 24 OP2 G B 87 -21.018 41.288 123.181 1.00145.91 O
ATOM 25 O5' G B 87 -19.649 43.055 122.072 1.00150.52 O
TER
ATOM 2 P A A 4 -10.927 36.043 110.051 1.00150.78 P
ATOM 3 OP1 A A 4 -9.671 36.060 109.261 1.00152.61 O
ATOM 4 OP2 A A 4 -11.310 34.813 110.790 1.00151.01 O
ATOM 5 O5' A A 4 -10.891 37.258 111.082 1.00150.38 O
ATOM 6 C5' A A 4 -10.594 38.576 110.631 1.00148.19 C
ATOM 7 C4' A A 4 -10.724 39.571 111.762 1.00146.27 C
ATOM 8 O4' A A 4 -12.110 39.668 112.182 1.00143.94 O
ATOM 9 C3' A A 4 -9.985 39.241 113.048 1.00144.41 C
ATOM 10 O3' A A 4 -8.607 39.581 112.961 1.00144.50 O
ATOM 11 C2' A A 4 -10.719 40.118 114.054 1.00143.86 C
ATOM 12 O2' A A 4 -10.318 41.472 114.003 1.00141.51 O
ATOM 13 C1' A A 4 -12.163 39.991 113.563 1.00142.92 C
ATOM 14 N9 A A 4 -12.885 38.930 114.259 1.00142.25 N
ATOM 15 C8 A A 4 -13.138 37.649 113.832 1.00141.77 C
ATOM 16 N7 A A 4 -13.805 36.926 114.698 1.00141.51 N
ATOM 17 C5 A A 4 -14.008 37.789 115.767 1.00141.54 C
ATOM 18 C6 A A 4 -14.653 37.627 117.006 1.00141.01 C
ATOM 19 N6 A A 4 -15.238 36.491 117.393 1.00140.54 N
ATOM 20 N1 A A 4 -14.675 38.686 117.845 1.00140.70 N
ATOM 21 C2 A A 4 -14.087 39.825 117.456 1.00140.70 C
ATOM 22 N3 A A 4 -13.451 40.100 116.319 1.00140.88 N
ATOM 23 C4 A A 4 -13.447 39.027 115.509 1.00141.68 C
ATOM 24 P C A 5 -7.524 38.712 113.769 1.00143.89 P
ATOM 25 OP1 C A 5 -6.175 39.066 113.261 1.00145.43 O
ATOM 26 OP2 C A 5 -7.975 37.297 113.730 1.00142.72 O
ATOM 27 O5' C A 5 -7.652 39.233 115.270 1.00143.38 O
TER
ATOM 1 O3' G B 85 -17.067 36.844 127.464 1.00128.73 O
ATOM 2 P U B 86 -18.586 37.223 127.106 1.00131.98 P
ATOM 3 OP1 U B 86 -19.451 36.777 128.228 1.00134.23 O
ATOM 4 OP2 U B 86 -18.859 36.736 125.728 1.00129.59 O
ATOM 5 O5' U B 86 -18.582 38.812 127.074 1.00134.54 O
ATOM 6 C5' U B 86 -19.021 39.512 125.921 1.00137.21 C
ATOM 7 C4' U B 86 -17.972 40.502 125.485 1.00138.87 C
ATOM 8 O4' U B 86 -16.724 39.805 125.219 1.00138.51 O
ATOM 9 C3' U B 86 -18.288 41.208 124.182 1.00140.64 C
ATOM 10 O3' U B 86 -19.130 42.322 124.413 1.00143.65 O
ATOM 11 C2' U B 86 -16.905 41.613 123.698 1.00140.30 C
ATOM 12 O2' U B 86 -16.408 42.752 124.371 1.00142.01 O
ATOM 13 C1' U B 86 -16.091 40.378 124.085 1.00138.89 C
ATOM 14 N1 U B 86 -16.073 39.365 123.020 1.00138.29 N
ATOM 15 C2 U B 86 -15.422 39.678 121.841 1.00137.94 C
ATOM 16 O2 U B 86 -14.864 40.746 121.655 1.00136.98 O
ATOM 17 N3 U B 86 -15.452 38.692 120.886 1.00137.88 N
ATOM 18 C4 U B 86 -16.052 37.451 120.989 1.00137.91 C
ATOM 19 O4 U B 86 -15.994 36.668 120.040 1.00137.36 O
ATOM 20 C5 U B 86 -16.700 37.205 122.240 1.00137.99 C
ATOM 21 C6 U B 86 -16.688 38.146 123.189 1.00138.33 C
ATOM 22 P G B 87 -20.356 42.596 123.422 1.00147.53 P
ATOM 23 OP1 G B 87 -21.146 43.734 123.956 1.00150.20 O
ATOM 24 OP2 G B 87 -21.018 41.288 123.181 1.00145.91 O
ATOM 25 O5' G B 87 -19.649 43.055 122.072 1.00150.52 O
TER
Atoms:
OP1: (-9.671,36.060,109.261)
OP2: (-11.310,34.813,110.790)
C3': (-9.985,39.241,113.048)
C1': (-12.163,39.991,113.563)
C5': (-10.594,38.576,110.631)
O4': (-12.110,39.668,112.182)
C8: (-13.138,37.649,113.832)
O2': (-10.318,41.472,114.003)
C6: (-14.653,37.627,117.006)
C5: (-14.008,37.789,115.767)
C4: (-13.447,39.027,115.509)
P: (-10.927,36.043,110.051)
C4': (-10.724,39.571,111.762)
C2': (-10.719,40.118,114.054)
C2: (-14.087,39.825,117.456)
N1: (-14.675,38.686,117.845)
N3: (-13.451,40.100,116.319)
N6: (-15.238,36.491,117.393)
N7: (-13.805,36.926,114.698)
N9: (-12.885,38.930,114.259)
O5': (-10.891,37.258,111.082)
O3': (-8.607,39.581,112.961)
OP2: (-11.310,34.813,110.790)
C3': (-9.985,39.241,113.048)
C1': (-12.163,39.991,113.563)
C5': (-10.594,38.576,110.631)
O4': (-12.110,39.668,112.182)
C8: (-13.138,37.649,113.832)
O2': (-10.318,41.472,114.003)
C6: (-14.653,37.627,117.006)
C5: (-14.008,37.789,115.767)
C4: (-13.447,39.027,115.509)
P: (-10.927,36.043,110.051)
C4': (-10.724,39.571,111.762)
C2': (-10.719,40.118,114.054)
C2: (-14.087,39.825,117.456)
N1: (-14.675,38.686,117.845)
N3: (-13.451,40.100,116.319)
N6: (-15.238,36.491,117.393)
N7: (-13.805,36.926,114.698)
N9: (-12.885,38.930,114.259)
O5': (-10.891,37.258,111.082)
O3': (-8.607,39.581,112.961)
C4: (-16.052,37.451,120.989)
N3: (-15.452,38.692,120.886)
OP1: (-19.451,36.777,128.228)
OP2: (-18.859,36.736,125.728)
C2: (-15.422,39.678,121.841)
C1': (-16.091,40.378,124.085)
C3': (-18.288,41.208,124.182)
O5': (-18.582,38.812,127.074)
O4': (-16.724,39.805,125.219)
C5': (-19.021,39.512,125.921)
P: (-18.586,37.223,127.106)
C4': (-17.972,40.502,125.485)
C2': (-16.905,41.613,123.698)
O2': (-16.408,42.752,124.371)
N1: (-16.073,39.365,123.020)
O4: (-15.994,36.668,120.040)
O2: (-14.864,40.746,121.655)
C6: (-16.688,38.146,123.189)
C5: (-16.700,37.205,122.240)
O3': (-19.130,42.322,124.413)
N3: (-15.452,38.692,120.886)
OP1: (-19.451,36.777,128.228)
OP2: (-18.859,36.736,125.728)
C2: (-15.422,39.678,121.841)
C1': (-16.091,40.378,124.085)
C3': (-18.288,41.208,124.182)
O5': (-18.582,38.812,127.074)
O4': (-16.724,39.805,125.219)
C5': (-19.021,39.512,125.921)
P: (-18.586,37.223,127.106)
C4': (-17.972,40.502,125.485)
C2': (-16.905,41.613,123.698)
O2': (-16.408,42.752,124.371)
N1: (-16.073,39.365,123.020)
O4: (-15.994,36.668,120.040)
O2: (-14.864,40.746,121.655)
C6: (-16.688,38.146,123.189)
C5: (-16.700,37.205,122.240)
O3': (-19.130,42.322,124.413)
Image (generated by PyMOL):