Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XDB:G4:G19
Extra
PDB:
ATOM 1 O3' C A 3 -8.754 -6.146 28.921 1.00 99.70 O
ATOM 2 P A A 4 -7.349 -5.722 29.577 1.00 82.98 P
ATOM 3 OP1 A A 4 -7.096 -6.586 30.753 1.00 89.07 O
ATOM 4 OP2 A A 4 -6.386 -5.724 28.449 1.00 81.66 O
ATOM 5 O5' A A 4 -7.606 -4.224 30.038 1.00 72.63 O
ATOM 6 C5' A A 4 -8.669 -3.830 30.890 1.00 70.56 C
ATOM 7 C4' A A 4 -8.207 -2.775 31.867 1.00 74.14 C
ATOM 8 O4' A A 4 -6.756 -2.714 31.884 1.00 75.48 O
ATOM 9 C3' A A 4 -8.632 -1.348 31.573 1.00 72.46 C
ATOM 10 O3' A A 4 -9.938 -1.074 32.033 1.00 73.42 O
ATOM 11 C2' A A 4 -7.578 -0.537 32.307 1.00 77.40 C
ATOM 12 O2' A A 4 -7.847 -0.557 33.704 1.00 80.30 O
ATOM 13 C1' A A 4 -6.330 -1.383 32.057 1.00 75.10 C
ATOM 14 N9 A A 4 -5.585 -0.987 30.843 1.00 75.09 N
ATOM 15 C8 A A 4 -5.240 -1.800 29.789 1.00 76.31 C
ATOM 16 N7 A A 4 -4.557 -1.202 28.843 1.00 74.64 N
ATOM 17 C5 A A 4 -4.431 0.097 29.311 1.00 72.15 C
ATOM 18 C6 A A 4 -3.806 1.226 28.762 1.00 66.94 C
ATOM 19 N6 A A 4 -3.171 1.221 27.580 1.00 61.29 N
ATOM 20 N1 A A 4 -3.856 2.366 29.486 1.00 63.72 N
ATOM 21 C2 A A 4 -4.487 2.363 30.665 1.00 63.55 C
ATOM 22 N3 A A 4 -5.111 1.368 31.284 1.00 69.42 N
ATOM 23 C4 A A 4 -5.048 0.247 30.544 1.00 73.09 C
ATOM 24 P G A 5 -10.992 -0.393 31.039 1.00 80.38 P
ATOM 25 OP1 G A 5 -12.318 -0.637 31.651 1.00 79.46 O
ATOM 26 OP2 G A 5 -10.649 -0.936 29.700 1.00 76.58 O
ATOM 27 O5' G A 5 -10.662 1.163 31.105 1.00 64.56 O
TER
ATOM 1 O3' C B 18 2.144 10.127 26.068 1.00 41.94 O
ATOM 2 P U B 19 3.141 9.399 27.089 1.00 61.44 P
ATOM 3 OP1 U B 19 3.987 10.499 27.597 1.00 59.16 O
ATOM 4 OP2 U B 19 3.775 8.211 26.454 1.00 58.01 O
ATOM 5 O5' U B 19 2.140 8.936 28.221 1.00 50.83 O
ATOM 6 C5' U B 19 1.660 9.843 29.194 1.00 44.19 C
ATOM 7 C4' U B 19 1.002 9.085 30.306 1.00 45.99 C
ATOM 8 O4' U B 19 -0.293 8.609 29.852 1.00 50.15 O
ATOM 9 C3' U B 19 1.713 7.813 30.735 1.00 50.51 C
ATOM 10 O3' U B 19 2.855 8.037 31.555 1.00 71.23 O
ATOM 11 C2' U B 19 0.571 7.080 31.416 1.00 50.29 C
ATOM 12 O2' U B 19 0.219 7.767 32.597 1.00 59.77 O
ATOM 13 C1' U B 19 -0.566 7.358 30.446 1.00 52.79 C
ATOM 14 N1 U B 19 -0.660 6.290 29.439 1.00 53.33 N
ATOM 15 C2 U B 19 -1.600 5.324 29.663 1.00 52.85 C
ATOM 16 O2 U B 19 -2.323 5.344 30.629 1.00 64.42 O
ATOM 17 N3 U B 19 -1.668 4.348 28.718 1.00 48.30 N
ATOM 18 C4 U B 19 -0.892 4.237 27.593 1.00 51.74 C
ATOM 19 O4 U B 19 -1.067 3.291 26.831 1.00 60.53 O
ATOM 20 C5 U B 19 0.069 5.271 27.429 1.00 54.02 C
ATOM 21 C6 U B 19 0.149 6.242 28.339 1.00 56.56 C
ATOM 22 P U B 20 3.994 6.908 31.877 1.00 87.98 P
ATOM 23 OP1 U B 20 4.134 5.969 30.728 1.00 75.54 O
ATOM 24 OP2 U B 20 3.640 6.365 33.213 1.00 86.27 O
ATOM 25 O5' U B 20 5.311 7.794 31.986 1.00 85.99 O
TER
ATOM 2 P A A 4 -7.349 -5.722 29.577 1.00 82.98 P
ATOM 3 OP1 A A 4 -7.096 -6.586 30.753 1.00 89.07 O
ATOM 4 OP2 A A 4 -6.386 -5.724 28.449 1.00 81.66 O
ATOM 5 O5' A A 4 -7.606 -4.224 30.038 1.00 72.63 O
ATOM 6 C5' A A 4 -8.669 -3.830 30.890 1.00 70.56 C
ATOM 7 C4' A A 4 -8.207 -2.775 31.867 1.00 74.14 C
ATOM 8 O4' A A 4 -6.756 -2.714 31.884 1.00 75.48 O
ATOM 9 C3' A A 4 -8.632 -1.348 31.573 1.00 72.46 C
ATOM 10 O3' A A 4 -9.938 -1.074 32.033 1.00 73.42 O
ATOM 11 C2' A A 4 -7.578 -0.537 32.307 1.00 77.40 C
ATOM 12 O2' A A 4 -7.847 -0.557 33.704 1.00 80.30 O
ATOM 13 C1' A A 4 -6.330 -1.383 32.057 1.00 75.10 C
ATOM 14 N9 A A 4 -5.585 -0.987 30.843 1.00 75.09 N
ATOM 15 C8 A A 4 -5.240 -1.800 29.789 1.00 76.31 C
ATOM 16 N7 A A 4 -4.557 -1.202 28.843 1.00 74.64 N
ATOM 17 C5 A A 4 -4.431 0.097 29.311 1.00 72.15 C
ATOM 18 C6 A A 4 -3.806 1.226 28.762 1.00 66.94 C
ATOM 19 N6 A A 4 -3.171 1.221 27.580 1.00 61.29 N
ATOM 20 N1 A A 4 -3.856 2.366 29.486 1.00 63.72 N
ATOM 21 C2 A A 4 -4.487 2.363 30.665 1.00 63.55 C
ATOM 22 N3 A A 4 -5.111 1.368 31.284 1.00 69.42 N
ATOM 23 C4 A A 4 -5.048 0.247 30.544 1.00 73.09 C
ATOM 24 P G A 5 -10.992 -0.393 31.039 1.00 80.38 P
ATOM 25 OP1 G A 5 -12.318 -0.637 31.651 1.00 79.46 O
ATOM 26 OP2 G A 5 -10.649 -0.936 29.700 1.00 76.58 O
ATOM 27 O5' G A 5 -10.662 1.163 31.105 1.00 64.56 O
TER
ATOM 1 O3' C B 18 2.144 10.127 26.068 1.00 41.94 O
ATOM 2 P U B 19 3.141 9.399 27.089 1.00 61.44 P
ATOM 3 OP1 U B 19 3.987 10.499 27.597 1.00 59.16 O
ATOM 4 OP2 U B 19 3.775 8.211 26.454 1.00 58.01 O
ATOM 5 O5' U B 19 2.140 8.936 28.221 1.00 50.83 O
ATOM 6 C5' U B 19 1.660 9.843 29.194 1.00 44.19 C
ATOM 7 C4' U B 19 1.002 9.085 30.306 1.00 45.99 C
ATOM 8 O4' U B 19 -0.293 8.609 29.852 1.00 50.15 O
ATOM 9 C3' U B 19 1.713 7.813 30.735 1.00 50.51 C
ATOM 10 O3' U B 19 2.855 8.037 31.555 1.00 71.23 O
ATOM 11 C2' U B 19 0.571 7.080 31.416 1.00 50.29 C
ATOM 12 O2' U B 19 0.219 7.767 32.597 1.00 59.77 O
ATOM 13 C1' U B 19 -0.566 7.358 30.446 1.00 52.79 C
ATOM 14 N1 U B 19 -0.660 6.290 29.439 1.00 53.33 N
ATOM 15 C2 U B 19 -1.600 5.324 29.663 1.00 52.85 C
ATOM 16 O2 U B 19 -2.323 5.344 30.629 1.00 64.42 O
ATOM 17 N3 U B 19 -1.668 4.348 28.718 1.00 48.30 N
ATOM 18 C4 U B 19 -0.892 4.237 27.593 1.00 51.74 C
ATOM 19 O4 U B 19 -1.067 3.291 26.831 1.00 60.53 O
ATOM 20 C5 U B 19 0.069 5.271 27.429 1.00 54.02 C
ATOM 21 C6 U B 19 0.149 6.242 28.339 1.00 56.56 C
ATOM 22 P U B 20 3.994 6.908 31.877 1.00 87.98 P
ATOM 23 OP1 U B 20 4.134 5.969 30.728 1.00 75.54 O
ATOM 24 OP2 U B 20 3.640 6.365 33.213 1.00 86.27 O
ATOM 25 O5' U B 20 5.311 7.794 31.986 1.00 85.99 O
TER
Atoms:
OP1: (-7.096,-6.586,30.753)
OP2: (-6.386,-5.724,28.449)
C3': (-8.632,-1.348,31.573)
C1': (-6.330,-1.383,32.057)
C5': (-8.669,-3.830,30.890)
O4': (-6.756,-2.714,31.884)
C8: (-5.240,-1.800,29.789)
O2': (-7.847,-0.557,33.704)
C6: (-3.806,1.226,28.762)
C5: (-4.431,0.097,29.311)
C4: (-5.048,0.247,30.544)
P: (-7.349,-5.722,29.577)
C4': (-8.207,-2.775,31.867)
C2': (-7.578,-0.537,32.307)
C2: (-4.487,2.363,30.665)
N1: (-3.856,2.366,29.486)
N3: (-5.111,1.368,31.284)
N6: (-3.171,1.221,27.580)
N7: (-4.557,-1.202,28.843)
N9: (-5.585,-0.987,30.843)
O5': (-7.606,-4.224,30.038)
O3': (-9.938,-1.074,32.033)
OP2: (-6.386,-5.724,28.449)
C3': (-8.632,-1.348,31.573)
C1': (-6.330,-1.383,32.057)
C5': (-8.669,-3.830,30.890)
O4': (-6.756,-2.714,31.884)
C8: (-5.240,-1.800,29.789)
O2': (-7.847,-0.557,33.704)
C6: (-3.806,1.226,28.762)
C5: (-4.431,0.097,29.311)
C4: (-5.048,0.247,30.544)
P: (-7.349,-5.722,29.577)
C4': (-8.207,-2.775,31.867)
C2': (-7.578,-0.537,32.307)
C2: (-4.487,2.363,30.665)
N1: (-3.856,2.366,29.486)
N3: (-5.111,1.368,31.284)
N6: (-3.171,1.221,27.580)
N7: (-4.557,-1.202,28.843)
N9: (-5.585,-0.987,30.843)
O5': (-7.606,-4.224,30.038)
O3': (-9.938,-1.074,32.033)
C4: (-0.892,4.237,27.593)
N3: (-1.668,4.348,28.718)
OP1: (3.987,10.499,27.597)
OP2: (3.775,8.211,26.454)
C2: (-1.600,5.324,29.663)
C1': (-0.566,7.358,30.446)
C3': (1.713,7.813,30.735)
O5': (2.140,8.936,28.221)
O4': (-0.293,8.609,29.852)
C5': (1.660,9.843,29.194)
P: (3.141,9.399,27.089)
C4': (1.002,9.085,30.306)
C2': (0.571,7.080,31.416)
O2': (0.219,7.767,32.597)
N1: (-0.660,6.290,29.439)
O4: (-1.067,3.291,26.831)
O2: (-2.323,5.344,30.629)
C6: (0.149,6.242,28.339)
C5: (0.069,5.271,27.429)
O3': (2.855,8.037,31.555)
N3: (-1.668,4.348,28.718)
OP1: (3.987,10.499,27.597)
OP2: (3.775,8.211,26.454)
C2: (-1.600,5.324,29.663)
C1': (-0.566,7.358,30.446)
C3': (1.713,7.813,30.735)
O5': (2.140,8.936,28.221)
O4': (-0.293,8.609,29.852)
C5': (1.660,9.843,29.194)
P: (3.141,9.399,27.089)
C4': (1.002,9.085,30.306)
C2': (0.571,7.080,31.416)
O2': (0.219,7.767,32.597)
N1: (-0.660,6.290,29.439)
O4: (-1.067,3.291,26.831)
O2: (-2.323,5.344,30.629)
C6: (0.149,6.242,28.339)
C5: (0.069,5.271,27.429)
O3': (2.855,8.037,31.555)
Image (generated by PyMOL):