Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PXB:B39:B9
Extra
PDB:
ATOM 1 O3' A A 38 235.388 -3.113 58.385 1.00 50.02 O
ATOM 2 P A A 39 236.911 -2.597 58.512 1.00 55.15 P
ATOM 3 OP1 A A 39 237.631 -3.598 59.328 1.00 48.89 O
ATOM 4 OP2 A A 39 236.908 -1.173 58.940 1.00 50.03 O
ATOM 5 O5' A A 39 237.496 -2.703 57.034 1.00 54.14 O
ATOM 6 C5' A A 39 238.021 -3.935 56.557 1.00 51.51 C
ATOM 7 C4' A A 39 238.484 -3.793 55.130 1.00 51.04 C
ATOM 8 O4' A A 39 237.381 -3.305 54.319 1.00 51.82 O
ATOM 9 C3' A A 39 239.568 -2.762 54.898 1.00 52.44 C
ATOM 10 O3' A A 39 240.852 -3.291 55.177 1.00 54.00 O
ATOM 11 C2' A A 39 239.388 -2.468 53.419 1.00 51.05 C
ATOM 12 O2' A A 39 239.847 -3.540 52.628 1.00 48.57 O
ATOM 13 C1' A A 39 237.868 -2.409 53.330 1.00 49.06 C
ATOM 14 N9 A A 39 237.329 -1.078 53.620 1.00 40.59 N
ATOM 15 C8 A A 39 236.688 -0.670 54.767 1.00 39.29 C
ATOM 16 N7 A A 39 236.286 0.579 54.732 1.00 38.55 N
ATOM 17 C5 A A 39 236.704 1.027 53.486 1.00 38.07 C
ATOM 18 C6 A A 39 236.586 2.271 52.847 1.00 37.08 C
ATOM 19 N6 A A 39 235.989 3.322 53.402 1.00 36.94 N
ATOM 20 N1 A A 39 237.105 2.396 51.604 1.00 36.91 N
ATOM 21 C2 A A 39 237.699 1.329 51.051 1.00 37.87 C
ATOM 22 N3 A A 39 237.871 0.101 51.556 1.00 39.14 N
ATOM 23 C4 A A 39 237.346 0.018 52.790 1.00 37.87 C
ATOM 24 P G A 40 242.000 -2.317 55.723 1.00 46.04 P
ATOM 25 OP1 G A 40 243.110 -3.135 56.275 1.00 49.36 O
ATOM 26 OP2 G A 40 241.314 -1.333 56.595 1.00 48.20 O
ATOM 27 O5' G A 40 242.508 -1.563 54.415 1.00 45.01 O
TER
ATOM 1 O3' U B 8 238.181 11.767 47.641 1.00 45.59 O
ATOM 2 P U B 9 236.912 11.221 46.829 1.00 44.67 P
ATOM 3 OP1 U B 9 236.864 11.930 45.534 1.00 38.80 O
ATOM 4 OP2 U B 9 235.731 11.262 47.714 1.00 37.06 O
ATOM 5 O5' U B 9 237.279 9.687 46.597 1.00 45.42 O
ATOM 6 C5' U B 9 238.314 9.299 45.696 1.00 43.96 C
ATOM 7 C4' U B 9 238.350 7.793 45.575 1.00 45.30 C
ATOM 8 O4' U B 9 238.712 7.225 46.856 1.00 46.92 O
ATOM 9 C3' U B 9 237.014 7.154 45.236 1.00 45.83 C
ATOM 10 O3' U B 9 236.902 7.061 43.828 1.00 45.59 O
ATOM 11 C2' U B 9 237.128 5.755 45.835 1.00 46.16 C
ATOM 12 O2' U B 9 237.725 4.852 44.928 1.00 48.63 O
ATOM 13 C1' U B 9 238.067 5.980 47.023 1.00 44.65 C
ATOM 14 N1 U B 9 237.443 5.953 48.352 1.00 37.65 N
ATOM 15 C2 U B 9 237.512 4.762 49.059 1.00 36.32 C
ATOM 16 O2 U B 9 238.017 3.753 48.601 1.00 35.74 O
ATOM 17 N3 U B 9 236.964 4.796 50.317 1.00 33.28 N
ATOM 18 C4 U B 9 236.347 5.867 50.919 1.00 33.51 C
ATOM 19 O4 U B 9 235.908 5.740 52.059 1.00 33.36 O
ATOM 20 C5 U B 9 236.289 7.058 50.120 1.00 32.28 C
ATOM 21 C6 U B 9 236.831 7.061 48.891 1.00 35.21 C
ATOM 22 P A B 10 235.604 7.640 43.087 1.00 43.88 P
ATOM 23 OP1 A B 10 235.887 7.693 41.621 1.00 43.12 O
ATOM 24 OP2 A B 10 235.252 8.885 43.820 1.00 46.32 O
ATOM 25 O5' A B 10 234.457 6.559 43.345 1.00 41.13 O
TER
ATOM 2 P A A 39 236.911 -2.597 58.512 1.00 55.15 P
ATOM 3 OP1 A A 39 237.631 -3.598 59.328 1.00 48.89 O
ATOM 4 OP2 A A 39 236.908 -1.173 58.940 1.00 50.03 O
ATOM 5 O5' A A 39 237.496 -2.703 57.034 1.00 54.14 O
ATOM 6 C5' A A 39 238.021 -3.935 56.557 1.00 51.51 C
ATOM 7 C4' A A 39 238.484 -3.793 55.130 1.00 51.04 C
ATOM 8 O4' A A 39 237.381 -3.305 54.319 1.00 51.82 O
ATOM 9 C3' A A 39 239.568 -2.762 54.898 1.00 52.44 C
ATOM 10 O3' A A 39 240.852 -3.291 55.177 1.00 54.00 O
ATOM 11 C2' A A 39 239.388 -2.468 53.419 1.00 51.05 C
ATOM 12 O2' A A 39 239.847 -3.540 52.628 1.00 48.57 O
ATOM 13 C1' A A 39 237.868 -2.409 53.330 1.00 49.06 C
ATOM 14 N9 A A 39 237.329 -1.078 53.620 1.00 40.59 N
ATOM 15 C8 A A 39 236.688 -0.670 54.767 1.00 39.29 C
ATOM 16 N7 A A 39 236.286 0.579 54.732 1.00 38.55 N
ATOM 17 C5 A A 39 236.704 1.027 53.486 1.00 38.07 C
ATOM 18 C6 A A 39 236.586 2.271 52.847 1.00 37.08 C
ATOM 19 N6 A A 39 235.989 3.322 53.402 1.00 36.94 N
ATOM 20 N1 A A 39 237.105 2.396 51.604 1.00 36.91 N
ATOM 21 C2 A A 39 237.699 1.329 51.051 1.00 37.87 C
ATOM 22 N3 A A 39 237.871 0.101 51.556 1.00 39.14 N
ATOM 23 C4 A A 39 237.346 0.018 52.790 1.00 37.87 C
ATOM 24 P G A 40 242.000 -2.317 55.723 1.00 46.04 P
ATOM 25 OP1 G A 40 243.110 -3.135 56.275 1.00 49.36 O
ATOM 26 OP2 G A 40 241.314 -1.333 56.595 1.00 48.20 O
ATOM 27 O5' G A 40 242.508 -1.563 54.415 1.00 45.01 O
TER
ATOM 1 O3' U B 8 238.181 11.767 47.641 1.00 45.59 O
ATOM 2 P U B 9 236.912 11.221 46.829 1.00 44.67 P
ATOM 3 OP1 U B 9 236.864 11.930 45.534 1.00 38.80 O
ATOM 4 OP2 U B 9 235.731 11.262 47.714 1.00 37.06 O
ATOM 5 O5' U B 9 237.279 9.687 46.597 1.00 45.42 O
ATOM 6 C5' U B 9 238.314 9.299 45.696 1.00 43.96 C
ATOM 7 C4' U B 9 238.350 7.793 45.575 1.00 45.30 C
ATOM 8 O4' U B 9 238.712 7.225 46.856 1.00 46.92 O
ATOM 9 C3' U B 9 237.014 7.154 45.236 1.00 45.83 C
ATOM 10 O3' U B 9 236.902 7.061 43.828 1.00 45.59 O
ATOM 11 C2' U B 9 237.128 5.755 45.835 1.00 46.16 C
ATOM 12 O2' U B 9 237.725 4.852 44.928 1.00 48.63 O
ATOM 13 C1' U B 9 238.067 5.980 47.023 1.00 44.65 C
ATOM 14 N1 U B 9 237.443 5.953 48.352 1.00 37.65 N
ATOM 15 C2 U B 9 237.512 4.762 49.059 1.00 36.32 C
ATOM 16 O2 U B 9 238.017 3.753 48.601 1.00 35.74 O
ATOM 17 N3 U B 9 236.964 4.796 50.317 1.00 33.28 N
ATOM 18 C4 U B 9 236.347 5.867 50.919 1.00 33.51 C
ATOM 19 O4 U B 9 235.908 5.740 52.059 1.00 33.36 O
ATOM 20 C5 U B 9 236.289 7.058 50.120 1.00 32.28 C
ATOM 21 C6 U B 9 236.831 7.061 48.891 1.00 35.21 C
ATOM 22 P A B 10 235.604 7.640 43.087 1.00 43.88 P
ATOM 23 OP1 A B 10 235.887 7.693 41.621 1.00 43.12 O
ATOM 24 OP2 A B 10 235.252 8.885 43.820 1.00 46.32 O
ATOM 25 O5' A B 10 234.457 6.559 43.345 1.00 41.13 O
TER
Atoms:
OP1: (237.631,-3.598,59.328)
OP2: (236.908,-1.173,58.940)
C3': (239.568,-2.762,54.898)
C1': (237.868,-2.409,53.330)
C5': (238.021,-3.935,56.557)
O4': (237.381,-3.305,54.319)
C8: (236.688,-0.670,54.767)
O2': (239.847,-3.540,52.628)
C6: (236.586,2.271,52.847)
C5: (236.704,1.027,53.486)
C4: (237.346,0.018,52.790)
P: (236.911,-2.597,58.512)
C4': (238.484,-3.793,55.130)
C2': (239.388,-2.468,53.419)
C2: (237.699,1.329,51.051)
N1: (237.105,2.396,51.604)
N3: (237.871,0.101,51.556)
N6: (235.989,3.322,53.402)
N7: (236.286,0.579,54.732)
N9: (237.329,-1.078,53.620)
O5': (237.496,-2.703,57.034)
O3': (240.852,-3.291,55.177)
OP2: (236.908,-1.173,58.940)
C3': (239.568,-2.762,54.898)
C1': (237.868,-2.409,53.330)
C5': (238.021,-3.935,56.557)
O4': (237.381,-3.305,54.319)
C8: (236.688,-0.670,54.767)
O2': (239.847,-3.540,52.628)
C6: (236.586,2.271,52.847)
C5: (236.704,1.027,53.486)
C4: (237.346,0.018,52.790)
P: (236.911,-2.597,58.512)
C4': (238.484,-3.793,55.130)
C2': (239.388,-2.468,53.419)
C2: (237.699,1.329,51.051)
N1: (237.105,2.396,51.604)
N3: (237.871,0.101,51.556)
N6: (235.989,3.322,53.402)
N7: (236.286,0.579,54.732)
N9: (237.329,-1.078,53.620)
O5': (237.496,-2.703,57.034)
O3': (240.852,-3.291,55.177)
C4: (236.347,5.867,50.919)
N3: (236.964,4.796,50.317)
OP1: (236.864,11.930,45.534)
OP2: (235.731,11.262,47.714)
C2: (237.512,4.762,49.059)
C1': (238.067,5.980,47.023)
C3': (237.014,7.154,45.236)
O5': (237.279,9.687,46.597)
O4': (238.712,7.225,46.856)
C5': (238.314,9.299,45.696)
P: (236.912,11.221,46.829)
C4': (238.350,7.793,45.575)
C2': (237.128,5.755,45.835)
O2': (237.725,4.852,44.928)
N1: (237.443,5.953,48.352)
O4: (235.908,5.740,52.059)
O2: (238.017,3.753,48.601)
C6: (236.831,7.061,48.891)
C5: (236.289,7.058,50.120)
O3': (236.902,7.061,43.828)
N3: (236.964,4.796,50.317)
OP1: (236.864,11.930,45.534)
OP2: (235.731,11.262,47.714)
C2: (237.512,4.762,49.059)
C1': (238.067,5.980,47.023)
C3': (237.014,7.154,45.236)
O5': (237.279,9.687,46.597)
O4': (238.712,7.225,46.856)
C5': (238.314,9.299,45.696)
P: (236.912,11.221,46.829)
C4': (238.350,7.793,45.575)
C2': (237.128,5.755,45.835)
O2': (237.725,4.852,44.928)
N1: (237.443,5.953,48.352)
O4: (235.908,5.740,52.059)
O2: (238.017,3.753,48.601)
C6: (236.831,7.061,48.891)
C5: (236.289,7.058,50.120)
O3': (236.902,7.061,43.828)
Image (generated by PyMOL):