Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0944:0968
Extra
PDB:
ATOM 1 O3' G A 943 52.191 68.812 118.748 1.00 53.20 O
ATOM 2 P A A 944 53.557 68.507 119.542 1.00 56.33 P
ATOM 3 OP1 A A 944 53.309 68.860 120.964 1.00 57.34 O
ATOM 4 OP2 A A 944 54.688 69.151 118.816 1.00 56.03 O
ATOM 5 O5' A A 944 53.725 66.927 119.425 1.00 52.26 O
ATOM 6 C5' A A 944 52.747 66.035 119.980 1.00 51.65 C
ATOM 7 C4' A A 944 53.037 64.625 119.539 1.00 51.72 C
ATOM 8 O4' A A 944 53.035 64.607 118.092 1.00 50.81 O
ATOM 9 C3' A A 944 54.406 64.092 119.934 1.00 51.70 C
ATOM 10 O3' A A 944 54.384 63.483 121.227 1.00 51.35 O
ATOM 11 C2' A A 944 54.683 63.079 118.839 1.00 52.39 C
ATOM 12 O2' A A 944 53.982 61.876 119.070 1.00 54.58 O
ATOM 13 C1' A A 944 54.086 63.789 117.620 1.00 52.22 C
ATOM 14 N9 A A 944 55.033 64.652 116.908 1.00 52.45 N
ATOM 15 C8 A A 944 55.155 66.019 117.003 1.00 52.82 C
ATOM 16 N7 A A 944 56.097 66.519 116.244 1.00 52.37 N
ATOM 17 C5 A A 944 56.632 65.411 115.604 1.00 51.51 C
ATOM 18 C6 A A 944 57.662 65.274 114.670 1.00 51.62 C
ATOM 19 N6 A A 944 58.369 66.298 114.193 1.00 52.19 N
ATOM 20 N1 A A 944 57.950 64.033 114.233 1.00 51.83 N
ATOM 21 C2 A A 944 57.239 63.007 114.707 1.00 51.84 C
ATOM 22 N3 A A 944 56.245 63.008 115.584 1.00 51.79 N
ATOM 23 C4 A A 944 55.987 64.256 116.002 1.00 51.65 C
ATOM 24 P G A 945 55.678 63.577 122.182 1.00 50.87 P
ATOM 25 OP1 G A 945 55.258 63.168 123.545 1.00 49.84 O
ATOM 26 OP2 G A 945 56.326 64.896 121.985 1.00 51.28 O
ATOM 27 O5' G A 945 56.659 62.474 121.600 1.00 48.75 O
TER
ATOM 1 O3' C B 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 2 P U B 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 3 OP1 U B 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 4 OP2 U B 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 5 O5' U B 968 63.707 61.012 108.431 1.00 44.76 O
ATOM 6 C5' U B 968 64.316 59.863 109.041 1.00 47.10 C
ATOM 7 C4' U B 968 63.345 59.194 109.991 1.00 47.63 C
ATOM 8 O4' U B 968 62.910 60.163 110.985 1.00 47.38 O
ATOM 9 C3' U B 968 62.072 58.622 109.375 1.00 47.41 C
ATOM 10 O3' U B 968 61.681 57.490 110.134 1.00 50.00 O
ATOM 11 C2' U B 968 61.064 59.745 109.598 1.00 46.45 C
ATOM 12 O2' U B 968 59.728 59.296 109.684 1.00 44.75 O
ATOM 13 C1' U B 968 61.505 60.280 110.954 1.00 46.15 C
ATOM 14 N1 U B 968 61.145 61.688 111.166 1.00 47.07 N
ATOM 15 C2 U B 968 60.075 61.958 111.996 1.00 48.13 C
ATOM 16 O2 U B 968 59.423 61.087 112.544 1.00 48.40 O
ATOM 17 N3 U B 968 59.791 63.291 112.159 1.00 49.13 N
ATOM 18 C4 U B 968 60.450 64.357 111.586 1.00 48.86 C
ATOM 19 O4 U B 968 60.058 65.502 111.813 1.00 48.94 O
ATOM 20 C5 U B 968 61.544 63.996 110.740 1.00 48.54 C
ATOM 21 C6 U B 968 61.846 62.707 110.563 1.00 47.32 C
ATOM 22 P C B 969 61.652 56.032 109.460 1.00 52.78 P
ATOM 23 OP1 C B 969 63.057 55.560 109.371 1.00 51.62 O
ATOM 24 OP2 C B 969 60.815 56.064 108.234 1.00 51.24 O
ATOM 25 O5' C B 969 60.860 55.183 110.552 1.00 52.14 O
TER
ATOM 2 P A A 944 53.557 68.507 119.542 1.00 56.33 P
ATOM 3 OP1 A A 944 53.309 68.860 120.964 1.00 57.34 O
ATOM 4 OP2 A A 944 54.688 69.151 118.816 1.00 56.03 O
ATOM 5 O5' A A 944 53.725 66.927 119.425 1.00 52.26 O
ATOM 6 C5' A A 944 52.747 66.035 119.980 1.00 51.65 C
ATOM 7 C4' A A 944 53.037 64.625 119.539 1.00 51.72 C
ATOM 8 O4' A A 944 53.035 64.607 118.092 1.00 50.81 O
ATOM 9 C3' A A 944 54.406 64.092 119.934 1.00 51.70 C
ATOM 10 O3' A A 944 54.384 63.483 121.227 1.00 51.35 O
ATOM 11 C2' A A 944 54.683 63.079 118.839 1.00 52.39 C
ATOM 12 O2' A A 944 53.982 61.876 119.070 1.00 54.58 O
ATOM 13 C1' A A 944 54.086 63.789 117.620 1.00 52.22 C
ATOM 14 N9 A A 944 55.033 64.652 116.908 1.00 52.45 N
ATOM 15 C8 A A 944 55.155 66.019 117.003 1.00 52.82 C
ATOM 16 N7 A A 944 56.097 66.519 116.244 1.00 52.37 N
ATOM 17 C5 A A 944 56.632 65.411 115.604 1.00 51.51 C
ATOM 18 C6 A A 944 57.662 65.274 114.670 1.00 51.62 C
ATOM 19 N6 A A 944 58.369 66.298 114.193 1.00 52.19 N
ATOM 20 N1 A A 944 57.950 64.033 114.233 1.00 51.83 N
ATOM 21 C2 A A 944 57.239 63.007 114.707 1.00 51.84 C
ATOM 22 N3 A A 944 56.245 63.008 115.584 1.00 51.79 N
ATOM 23 C4 A A 944 55.987 64.256 116.002 1.00 51.65 C
ATOM 24 P G A 945 55.678 63.577 122.182 1.00 50.87 P
ATOM 25 OP1 G A 945 55.258 63.168 123.545 1.00 49.84 O
ATOM 26 OP2 G A 945 56.326 64.896 121.985 1.00 51.28 O
ATOM 27 O5' G A 945 56.659 62.474 121.600 1.00 48.75 O
TER
ATOM 1 O3' C B 967 65.676 62.594 108.060 1.00 43.61 O
ATOM 2 P U B 968 64.462 61.841 107.303 1.00 44.44 P
ATOM 3 OP1 U B 968 65.036 60.878 106.331 1.00 42.85 O
ATOM 4 OP2 U B 968 63.510 62.874 106.835 1.00 44.79 O
ATOM 5 O5' U B 968 63.707 61.012 108.431 1.00 44.76 O
ATOM 6 C5' U B 968 64.316 59.863 109.041 1.00 47.10 C
ATOM 7 C4' U B 968 63.345 59.194 109.991 1.00 47.63 C
ATOM 8 O4' U B 968 62.910 60.163 110.985 1.00 47.38 O
ATOM 9 C3' U B 968 62.072 58.622 109.375 1.00 47.41 C
ATOM 10 O3' U B 968 61.681 57.490 110.134 1.00 50.00 O
ATOM 11 C2' U B 968 61.064 59.745 109.598 1.00 46.45 C
ATOM 12 O2' U B 968 59.728 59.296 109.684 1.00 44.75 O
ATOM 13 C1' U B 968 61.505 60.280 110.954 1.00 46.15 C
ATOM 14 N1 U B 968 61.145 61.688 111.166 1.00 47.07 N
ATOM 15 C2 U B 968 60.075 61.958 111.996 1.00 48.13 C
ATOM 16 O2 U B 968 59.423 61.087 112.544 1.00 48.40 O
ATOM 17 N3 U B 968 59.791 63.291 112.159 1.00 49.13 N
ATOM 18 C4 U B 968 60.450 64.357 111.586 1.00 48.86 C
ATOM 19 O4 U B 968 60.058 65.502 111.813 1.00 48.94 O
ATOM 20 C5 U B 968 61.544 63.996 110.740 1.00 48.54 C
ATOM 21 C6 U B 968 61.846 62.707 110.563 1.00 47.32 C
ATOM 22 P C B 969 61.652 56.032 109.460 1.00 52.78 P
ATOM 23 OP1 C B 969 63.057 55.560 109.371 1.00 51.62 O
ATOM 24 OP2 C B 969 60.815 56.064 108.234 1.00 51.24 O
ATOM 25 O5' C B 969 60.860 55.183 110.552 1.00 52.14 O
TER
Atoms:
OP1: (53.309,68.860,120.964)
OP2: (54.688,69.151,118.816)
C3': (54.406,64.092,119.934)
C1': (54.086,63.789,117.620)
C5': (52.747,66.035,119.980)
O4': (53.035,64.607,118.092)
C8: (55.155,66.019,117.003)
O2': (53.982,61.876,119.070)
C6: (57.662,65.274,114.670)
C5: (56.632,65.411,115.604)
C4: (55.987,64.256,116.002)
P: (53.557,68.507,119.542)
C4': (53.037,64.625,119.539)
C2': (54.683,63.079,118.839)
C2: (57.239,63.007,114.707)
N1: (57.950,64.033,114.233)
N3: (56.245,63.008,115.584)
N6: (58.369,66.298,114.193)
N7: (56.097,66.519,116.244)
N9: (55.033,64.652,116.908)
O5': (53.725,66.927,119.425)
O3': (54.384,63.483,121.227)
OP2: (54.688,69.151,118.816)
C3': (54.406,64.092,119.934)
C1': (54.086,63.789,117.620)
C5': (52.747,66.035,119.980)
O4': (53.035,64.607,118.092)
C8: (55.155,66.019,117.003)
O2': (53.982,61.876,119.070)
C6: (57.662,65.274,114.670)
C5: (56.632,65.411,115.604)
C4: (55.987,64.256,116.002)
P: (53.557,68.507,119.542)
C4': (53.037,64.625,119.539)
C2': (54.683,63.079,118.839)
C2: (57.239,63.007,114.707)
N1: (57.950,64.033,114.233)
N3: (56.245,63.008,115.584)
N6: (58.369,66.298,114.193)
N7: (56.097,66.519,116.244)
N9: (55.033,64.652,116.908)
O5': (53.725,66.927,119.425)
O3': (54.384,63.483,121.227)
C4: (60.450,64.357,111.586)
N3: (59.791,63.291,112.159)
OP1: (65.036,60.878,106.331)
OP2: (63.510,62.874,106.835)
C2: (60.075,61.958,111.996)
C1': (61.505,60.280,110.954)
C3': (62.072,58.622,109.375)
O5': (63.707,61.012,108.431)
O4': (62.910,60.163,110.985)
C5': (64.316,59.863,109.041)
P: (64.462,61.841,107.303)
C4': (63.345,59.194,109.991)
C2': (61.064,59.745,109.598)
O2': (59.728,59.296,109.684)
N1: (61.145,61.688,111.166)
O4: (60.058,65.502,111.813)
O2: (59.423,61.087,112.544)
C6: (61.846,62.707,110.563)
C5: (61.544,63.996,110.740)
O3': (61.681,57.490,110.134)
N3: (59.791,63.291,112.159)
OP1: (65.036,60.878,106.331)
OP2: (63.510,62.874,106.835)
C2: (60.075,61.958,111.996)
C1': (61.505,60.280,110.954)
C3': (62.072,58.622,109.375)
O5': (63.707,61.012,108.431)
O4': (62.910,60.163,110.985)
C5': (64.316,59.863,109.041)
P: (64.462,61.841,107.303)
C4': (63.345,59.194,109.991)
C2': (61.064,59.745,109.598)
O2': (59.728,59.296,109.684)
N1: (61.145,61.688,111.166)
O4: (60.058,65.502,111.813)
O2: (59.423,61.087,112.544)
C6: (61.846,62.707,110.563)
C5: (61.544,63.996,110.740)
O3': (61.681,57.490,110.134)
Image (generated by PyMOL):