ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUW:B36:B27

Extra

PDB:
ATOM 1 O3' G A 35 0.638 2.719 -2.864 1.00 67.92 O
ATOM 2 P A A 36 0.249 2.516 -1.329 1.00 69.25 P
ATOM 3 OP1 A A 36 1.525 2.540 -0.582 1.00 70.17 O
ATOM 4 OP2 A A 36 -0.661 1.351 -1.240 1.00 68.53 O
ATOM 5 O5' A A 36 -0.635 3.778 -0.889 1.00 68.59 O
ATOM 6 C5' A A 36 -0.307 5.121 -1.243 1.00 68.78 C
ATOM 7 C4' A A 36 -1.538 5.991 -1.082 1.00 68.06 C
ATOM 8 O4' A A 36 -2.591 5.645 -2.028 1.00 66.75 O
ATOM 9 C3' A A 36 -2.219 5.800 0.264 1.00 69.22 C
ATOM 10 O3' A A 36 -1.559 6.495 1.309 1.00 69.49 O
ATOM 11 C2' A A 36 -3.572 6.417 -0.028 1.00 68.19 C
ATOM 12 O2' A A 36 -3.438 7.819 -0.144 1.00 69.16 O
ATOM 13 C1' A A 36 -3.858 5.784 -1.390 1.00 67.14 C
ATOM 14 N9 A A 36 -4.656 4.526 -1.383 1.00 66.98 N
ATOM 15 C8 A A 36 -4.219 3.248 -1.598 1.00 66.18 C
ATOM 16 N7 A A 36 -5.181 2.346 -1.560 1.00 66.05 N
ATOM 17 C5 A A 36 -6.345 3.059 -1.303 1.00 65.73 C
ATOM 18 C6 A A 36 -7.713 2.689 -1.135 1.00 65.82 C
ATOM 19 N6 A A 36 -8.175 1.444 -1.209 1.00 66.13 N
ATOM 20 N1 A A 36 -8.625 3.640 -0.878 1.00 66.10 N
ATOM 21 C2 A A 36 -8.196 4.907 -0.798 1.00 66.66 C
ATOM 22 N3 A A 36 -6.943 5.376 -0.936 1.00 67.50 N
ATOM 23 C4 A A 36 -6.038 4.401 -1.188 1.00 66.54 C
ATOM 24 P C A 37 -1.405 5.802 2.744 1.00 70.78 P
ATOM 25 OP1 C A 37 -0.641 6.790 3.544 1.00 70.06 O
ATOM 26 OP2 C A 37 -0.945 4.403 2.550 1.00 69.14 O
ATOM 27 O5' C A 37 -2.877 5.665 3.362 1.00 69.71 O
TER

ATOM 1 O3' G B 26 -18.319 1.030 0.121 1.00 77.05 O
ATOM 2 P U B 27 -18.037 1.218 -1.443 1.00 78.89 P
ATOM 3 OP1 U B 27 -19.348 1.243 -2.121 1.00 78.94 O
ATOM 4 OP2 U B 27 -17.045 0.218 -1.889 1.00 79.55 O
ATOM 5 O5' U B 27 -17.337 2.661 -1.509 1.00 77.95 O
ATOM 6 C5' U B 27 -17.839 3.743 -0.710 1.00 77.18 C
ATOM 7 C4' U B 27 -16.801 4.836 -0.536 1.00 75.84 C
ATOM 8 O4' U B 27 -15.764 4.384 0.362 1.00 74.33 O
ATOM 9 C3' U B 27 -16.028 5.171 -1.798 1.00 76.24 C
ATOM 10 O3' U B 27 -16.717 6.057 -2.656 1.00 77.84 O
ATOM 11 C2' U B 27 -14.767 5.800 -1.235 1.00 75.32 C
ATOM 12 O2' U B 27 -14.962 7.160 -0.880 1.00 75.47 O
ATOM 13 C1' U B 27 -14.496 4.869 -0.050 1.00 73.35 C
ATOM 14 N1 U B 27 -13.556 3.718 -0.408 1.00 72.23 N
ATOM 15 C2 U B 27 -12.180 3.916 -0.379 1.00 72.09 C
ATOM 16 O2 U B 27 -11.644 4.967 -0.060 1.00 71.95 O
ATOM 17 N3 U B 27 -11.423 2.822 -0.728 1.00 72.10 N
ATOM 18 C4 U B 27 -11.883 1.573 -1.108 1.00 72.03 C
ATOM 19 O4 U B 27 -11.082 0.686 -1.394 1.00 71.60 O
ATOM 20 C5 U B 27 -13.319 1.448 -1.131 1.00 71.38 C
ATOM 21 C6 U B 27 -14.076 2.495 -0.789 1.00 71.30 C
ATOM 22 P C B 28 -16.586 5.733 -4.220 1.00 79.27 P
ATOM 23 OP1 C B 28 -17.658 6.497 -4.896 1.00 79.57 O
ATOM 24 OP2 C B 28 -16.524 4.256 -4.338 1.00 78.59 O
ATOM 25 O5' C B 28 -15.151 6.323 -4.649 1.00 77.68 O
TER

Atoms:
OP1: (1.525,2.540,-0.582)
OP2: (-0.661,1.351,-1.240)
C3': (-2.219,5.800,0.264)
C1': (-3.858,5.784,-1.390)
C5': (-0.307,5.121,-1.243)
O4': (-2.591,5.645,-2.028)
C8: (-4.219,3.248,-1.598)
O2': (-3.438,7.819,-0.144)
C6: (-7.713,2.689,-1.135)
C5: (-6.345,3.059,-1.303)
C4: (-6.038,4.401,-1.188)
P: (0.249,2.516,-1.329)
C4': (-1.538,5.991,-1.082)
C2': (-3.572,6.417,-0.028)
C2: (-8.196,4.907,-0.798)
N1: (-8.625,3.640,-0.878)
N3: (-6.943,5.376,-0.936)
N6: (-8.175,1.444,-1.209)
N7: (-5.181,2.346,-1.560)
N9: (-4.656,4.526,-1.383)
O5': (-0.635,3.778,-0.889)
O3': (-1.559,6.495,1.309)
C4: (-11.883,1.573,-1.108)
N3: (-11.423,2.822,-0.728)
OP1: (-19.348,1.243,-2.121)
OP2: (-17.045,0.218,-1.889)
C2: (-12.180,3.916,-0.379)
C1': (-14.496,4.869,-0.050)
C3': (-16.028,5.171,-1.798)
O5': (-17.337,2.661,-1.509)
O4': (-15.764,4.384,0.362)
C5': (-17.839,3.743,-0.710)
P: (-18.037,1.218,-1.443)
C4': (-16.801,4.836,-0.536)
C2': (-14.767,5.800,-1.235)
O2': (-14.962,7.160,-0.880)
N1: (-13.556,3.718,-0.408)
O4: (-11.082,0.686,-1.394)
O2: (-11.644,4.967,-0.060)
C6: (-14.076,2.495,-0.789)
C5: (-13.319,1.448,-1.131)
O3': (-16.717,6.057,-2.656)
Image (generated by PyMOL):
PyMOL image
show in jmol