Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:X28:Z37
Extra
PDB:
ATOM 1 O3' G A 27 32.206 -73.858 -87.987 1.00 74.68 O
ATOM 2 P A A 28 31.578 -72.401 -87.718 1.00 87.30 P
ATOM 3 OP1 A A 28 32.147 -71.489 -88.741 1.00 79.21 O
ATOM 4 OP2 A A 28 31.793 -72.090 -86.281 1.00 88.21 O
ATOM 5 O5' A A 28 30.027 -72.627 -88.000 1.00 82.64 O
ATOM 6 C5' A A 28 29.590 -73.060 -89.277 1.00 75.58 C
ATOM 7 C4' A A 28 28.118 -73.384 -89.293 1.00 72.23 C
ATOM 8 O4' A A 28 27.825 -74.443 -88.351 1.00 74.71 O
ATOM 9 C3' A A 28 27.175 -72.265 -88.893 1.00 74.15 C
ATOM 10 O3' A A 28 26.972 -71.331 -89.939 1.00 70.53 O
ATOM 11 C2' A A 28 25.909 -73.029 -88.496 1.00 74.38 C
ATOM 12 O2' A A 28 25.146 -73.373 -89.642 1.00 70.60 O
ATOM 13 C1' A A 28 26.490 -74.319 -87.903 1.00 74.58 C
ATOM 14 N9 A A 28 26.479 -74.322 -86.429 1.00 70.79 N
ATOM 15 C8 A A 28 27.560 -74.296 -85.588 1.00 71.55 C
ATOM 16 N7 A A 28 27.234 -74.329 -84.322 1.00 73.67 N
ATOM 17 C5 A A 28 25.849 -74.391 -84.336 1.00 72.49 C
ATOM 18 C6 A A 28 24.901 -74.449 -83.306 1.00 71.17 C
ATOM 19 N6 A A 28 25.239 -74.458 -82.015 1.00 66.33 N
ATOM 20 N1 A A 28 23.595 -74.501 -83.651 1.00 72.24 N
ATOM 21 C2 A A 28 23.273 -74.495 -84.950 1.00 70.38 C
ATOM 22 N3 A A 28 24.076 -74.445 -86.011 1.00 68.17 N
ATOM 23 C4 A A 28 25.366 -74.396 -85.628 1.00 70.43 C
ATOM 24 P C A 29 26.625 -69.794 -89.613 1.00 67.79 P
ATOM 25 OP1 C A 29 27.540 -69.347 -88.524 1.00 69.56 O
ATOM 26 OP2 C A 29 26.649 -69.065 -90.907 1.00 64.34 O
ATOM 27 O5' C A 29 25.129 -69.882 -89.069 1.00 66.32 O
TER
ATOM 1 O3' G B 36 16.474 -75.015 -76.806 1.00 55.79 O
ATOM 2 P U B 37 16.338 -76.466 -77.474 1.00 58.31 P
ATOM 3 OP1 U B 37 15.003 -76.999 -77.087 1.00 55.27 O
ATOM 4 OP2 U B 37 17.544 -77.235 -77.097 1.00 54.88 O
ATOM 5 O5' U B 37 16.363 -76.131 -79.033 1.00 58.92 O
ATOM 6 C5' U B 37 15.419 -75.223 -79.592 1.00 61.55 C
ATOM 7 C4' U B 37 15.571 -75.091 -81.088 1.00 63.31 C
ATOM 8 O4' U B 37 16.825 -74.424 -81.380 1.00 64.45 O
ATOM 9 C3' U B 37 15.582 -76.405 -81.865 1.00 64.90 C
ATOM 10 O3' U B 37 14.887 -76.241 -83.097 1.00 70.04 O
ATOM 11 C2' U B 37 17.063 -76.644 -82.139 1.00 64.35 C
ATOM 12 O2' U B 37 17.330 -77.381 -83.312 1.00 68.39 O
ATOM 13 C1' U B 37 17.622 -75.227 -82.230 1.00 65.43 C
ATOM 14 N1 U B 37 19.012 -75.133 -81.764 1.00 63.39 N
ATOM 15 C2 U B 37 20.009 -74.748 -82.628 1.00 66.79 C
ATOM 16 O2 U B 37 19.793 -74.450 -83.786 1.00 69.34 O
ATOM 17 N3 U B 37 21.265 -74.728 -82.070 1.00 68.67 N
ATOM 18 C4 U B 37 21.604 -75.057 -80.769 1.00 66.53 C
ATOM 19 O4 U B 37 22.774 -75.005 -80.389 1.00 70.12 O
ATOM 20 C5 U B 37 20.508 -75.446 -79.946 1.00 62.11 C
ATOM 21 C6 U B 37 19.282 -75.479 -80.463 1.00 62.22 C
ATOM 22 P C B 38 13.378 -76.769 -83.235 1.00 67.33 P
ATOM 23 OP1 C B 38 12.914 -76.404 -84.592 1.00 79.49 O
ATOM 24 OP2 C B 38 12.627 -76.262 -82.060 1.00 72.04 O
ATOM 25 O5' C B 38 13.543 -78.343 -83.129 1.00 67.39 O
TER
ATOM 2 P A A 28 31.578 -72.401 -87.718 1.00 87.30 P
ATOM 3 OP1 A A 28 32.147 -71.489 -88.741 1.00 79.21 O
ATOM 4 OP2 A A 28 31.793 -72.090 -86.281 1.00 88.21 O
ATOM 5 O5' A A 28 30.027 -72.627 -88.000 1.00 82.64 O
ATOM 6 C5' A A 28 29.590 -73.060 -89.277 1.00 75.58 C
ATOM 7 C4' A A 28 28.118 -73.384 -89.293 1.00 72.23 C
ATOM 8 O4' A A 28 27.825 -74.443 -88.351 1.00 74.71 O
ATOM 9 C3' A A 28 27.175 -72.265 -88.893 1.00 74.15 C
ATOM 10 O3' A A 28 26.972 -71.331 -89.939 1.00 70.53 O
ATOM 11 C2' A A 28 25.909 -73.029 -88.496 1.00 74.38 C
ATOM 12 O2' A A 28 25.146 -73.373 -89.642 1.00 70.60 O
ATOM 13 C1' A A 28 26.490 -74.319 -87.903 1.00 74.58 C
ATOM 14 N9 A A 28 26.479 -74.322 -86.429 1.00 70.79 N
ATOM 15 C8 A A 28 27.560 -74.296 -85.588 1.00 71.55 C
ATOM 16 N7 A A 28 27.234 -74.329 -84.322 1.00 73.67 N
ATOM 17 C5 A A 28 25.849 -74.391 -84.336 1.00 72.49 C
ATOM 18 C6 A A 28 24.901 -74.449 -83.306 1.00 71.17 C
ATOM 19 N6 A A 28 25.239 -74.458 -82.015 1.00 66.33 N
ATOM 20 N1 A A 28 23.595 -74.501 -83.651 1.00 72.24 N
ATOM 21 C2 A A 28 23.273 -74.495 -84.950 1.00 70.38 C
ATOM 22 N3 A A 28 24.076 -74.445 -86.011 1.00 68.17 N
ATOM 23 C4 A A 28 25.366 -74.396 -85.628 1.00 70.43 C
ATOM 24 P C A 29 26.625 -69.794 -89.613 1.00 67.79 P
ATOM 25 OP1 C A 29 27.540 -69.347 -88.524 1.00 69.56 O
ATOM 26 OP2 C A 29 26.649 -69.065 -90.907 1.00 64.34 O
ATOM 27 O5' C A 29 25.129 -69.882 -89.069 1.00 66.32 O
TER
ATOM 1 O3' G B 36 16.474 -75.015 -76.806 1.00 55.79 O
ATOM 2 P U B 37 16.338 -76.466 -77.474 1.00 58.31 P
ATOM 3 OP1 U B 37 15.003 -76.999 -77.087 1.00 55.27 O
ATOM 4 OP2 U B 37 17.544 -77.235 -77.097 1.00 54.88 O
ATOM 5 O5' U B 37 16.363 -76.131 -79.033 1.00 58.92 O
ATOM 6 C5' U B 37 15.419 -75.223 -79.592 1.00 61.55 C
ATOM 7 C4' U B 37 15.571 -75.091 -81.088 1.00 63.31 C
ATOM 8 O4' U B 37 16.825 -74.424 -81.380 1.00 64.45 O
ATOM 9 C3' U B 37 15.582 -76.405 -81.865 1.00 64.90 C
ATOM 10 O3' U B 37 14.887 -76.241 -83.097 1.00 70.04 O
ATOM 11 C2' U B 37 17.063 -76.644 -82.139 1.00 64.35 C
ATOM 12 O2' U B 37 17.330 -77.381 -83.312 1.00 68.39 O
ATOM 13 C1' U B 37 17.622 -75.227 -82.230 1.00 65.43 C
ATOM 14 N1 U B 37 19.012 -75.133 -81.764 1.00 63.39 N
ATOM 15 C2 U B 37 20.009 -74.748 -82.628 1.00 66.79 C
ATOM 16 O2 U B 37 19.793 -74.450 -83.786 1.00 69.34 O
ATOM 17 N3 U B 37 21.265 -74.728 -82.070 1.00 68.67 N
ATOM 18 C4 U B 37 21.604 -75.057 -80.769 1.00 66.53 C
ATOM 19 O4 U B 37 22.774 -75.005 -80.389 1.00 70.12 O
ATOM 20 C5 U B 37 20.508 -75.446 -79.946 1.00 62.11 C
ATOM 21 C6 U B 37 19.282 -75.479 -80.463 1.00 62.22 C
ATOM 22 P C B 38 13.378 -76.769 -83.235 1.00 67.33 P
ATOM 23 OP1 C B 38 12.914 -76.404 -84.592 1.00 79.49 O
ATOM 24 OP2 C B 38 12.627 -76.262 -82.060 1.00 72.04 O
ATOM 25 O5' C B 38 13.543 -78.343 -83.129 1.00 67.39 O
TER
Atoms:
OP1: (32.147,-71.489,-88.741)
OP2: (31.793,-72.090,-86.281)
C3': (27.175,-72.265,-88.893)
C1': (26.490,-74.319,-87.903)
C5': (29.590,-73.060,-89.277)
O4': (27.825,-74.443,-88.351)
C8: (27.560,-74.296,-85.588)
O2': (25.146,-73.373,-89.642)
C6: (24.901,-74.449,-83.306)
C5: (25.849,-74.391,-84.336)
C4: (25.366,-74.396,-85.628)
P: (31.578,-72.401,-87.718)
C4': (28.118,-73.384,-89.293)
C2': (25.909,-73.029,-88.496)
C2: (23.273,-74.495,-84.950)
N1: (23.595,-74.501,-83.651)
N3: (24.076,-74.445,-86.011)
N6: (25.239,-74.458,-82.015)
N7: (27.234,-74.329,-84.322)
N9: (26.479,-74.322,-86.429)
O5': (30.027,-72.627,-88.000)
O3': (26.972,-71.331,-89.939)
OP2: (31.793,-72.090,-86.281)
C3': (27.175,-72.265,-88.893)
C1': (26.490,-74.319,-87.903)
C5': (29.590,-73.060,-89.277)
O4': (27.825,-74.443,-88.351)
C8: (27.560,-74.296,-85.588)
O2': (25.146,-73.373,-89.642)
C6: (24.901,-74.449,-83.306)
C5: (25.849,-74.391,-84.336)
C4: (25.366,-74.396,-85.628)
P: (31.578,-72.401,-87.718)
C4': (28.118,-73.384,-89.293)
C2': (25.909,-73.029,-88.496)
C2: (23.273,-74.495,-84.950)
N1: (23.595,-74.501,-83.651)
N3: (24.076,-74.445,-86.011)
N6: (25.239,-74.458,-82.015)
N7: (27.234,-74.329,-84.322)
N9: (26.479,-74.322,-86.429)
O5': (30.027,-72.627,-88.000)
O3': (26.972,-71.331,-89.939)
C4: (21.604,-75.057,-80.769)
N3: (21.265,-74.728,-82.070)
OP1: (15.003,-76.999,-77.087)
OP2: (17.544,-77.235,-77.097)
C2: (20.009,-74.748,-82.628)
C1': (17.622,-75.227,-82.230)
C3': (15.582,-76.405,-81.865)
O5': (16.363,-76.131,-79.033)
O4': (16.825,-74.424,-81.380)
C5': (15.419,-75.223,-79.592)
P: (16.338,-76.466,-77.474)
C4': (15.571,-75.091,-81.088)
C2': (17.063,-76.644,-82.139)
O2': (17.330,-77.381,-83.312)
N1: (19.012,-75.133,-81.764)
O4: (22.774,-75.005,-80.389)
O2: (19.793,-74.450,-83.786)
C6: (19.282,-75.479,-80.463)
C5: (20.508,-75.446,-79.946)
O3': (14.887,-76.241,-83.097)
N3: (21.265,-74.728,-82.070)
OP1: (15.003,-76.999,-77.087)
OP2: (17.544,-77.235,-77.097)
C2: (20.009,-74.748,-82.628)
C1': (17.622,-75.227,-82.230)
C3': (15.582,-76.405,-81.865)
O5': (16.363,-76.131,-79.033)
O4': (16.825,-74.424,-81.380)
C5': (15.419,-75.223,-79.592)
P: (16.338,-76.466,-77.474)
C4': (15.571,-75.091,-81.088)
C2': (17.063,-76.644,-82.139)
O2': (17.330,-77.381,-83.312)
N1: (19.012,-75.133,-81.764)
O4: (22.774,-75.005,-80.389)
O2: (19.793,-74.450,-83.786)
C6: (19.282,-75.479,-80.463)
C5: (20.508,-75.446,-79.946)
O3': (14.887,-76.241,-83.097)
Image (generated by PyMOL):