Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2506:A2564
Extra
PDB:
ATOM 1 O3' C A2505 -65.685 -64.996 -24.638 1.00 0.01 O
ATOM 2 P A A2506 -66.430 -64.911 -26.046 1.00 0.01 P
ATOM 3 OP1 A A2506 -66.429 -66.241 -26.609 1.00 0.01 O
ATOM 4 OP2 A A2506 -65.825 -63.837 -26.814 1.00 0.01 O
ATOM 5 O5' A A2506 -67.872 -64.495 -25.634 1.00 0.01 O
ATOM 6 C5' A A2506 -68.943 -65.370 -25.809 1.00 0.01 C
ATOM 7 C4' A A2506 -69.434 -65.850 -24.502 1.00 0.01 C
ATOM 8 O4' A A2506 -69.657 -64.729 -23.633 1.00 0.01 O
ATOM 9 C3' A A2506 -70.747 -66.574 -24.510 1.00 0.01 C
ATOM 10 O3' A A2506 -70.605 -67.920 -24.911 1.00 0.01 O
ATOM 11 C2' A A2506 -71.173 -66.434 -23.063 1.00 0.01 C
ATOM 12 O2' A A2506 -70.500 -67.393 -22.265 1.00 0.01 O
ATOM 13 C1' A A2506 -70.629 -65.060 -22.696 1.00 0.01 C
ATOM 14 N9 A A2506 -71.652 -64.007 -22.686 1.00 0.01 N
ATOM 15 C8 A A2506 -71.534 -62.796 -23.275 1.00 0.01 C
ATOM 16 N7 A A2506 -72.548 -62.009 -23.075 1.00 0.01 N
ATOM 17 C5 A A2506 -73.388 -62.752 -22.287 1.00 0.01 C
ATOM 18 C6 A A2506 -74.634 -62.477 -21.724 1.00 0.01 C
ATOM 19 N6 A A2506 -75.313 -61.339 -21.870 1.00 0.01 N
ATOM 20 N1 A A2506 -75.197 -63.424 -20.980 1.00 0.01 N
ATOM 21 C2 A A2506 -74.549 -64.564 -20.810 1.00 0.01 C
ATOM 22 N3 A A2506 -73.377 -64.921 -21.283 1.00 0.01 N
ATOM 23 C4 A A2506 -72.839 -63.968 -22.026 1.00 0.01 C
ATOM 24 P U A2507 -71.148 -68.430 -26.324 1.00 0.01 P
ATOM 25 OP1 U A2507 -70.123 -69.280 -26.900 1.00 0.01 O
ATOM 26 OP2 U A2507 -71.607 -67.263 -27.078 1.00 0.01 O
ATOM 27 O5' U A2507 -72.375 -69.303 -25.909 1.00 0.01 O
TER
ATOM 1 O3' G B2563 -84.278 -64.086 -16.235 1.00 0.01 O
ATOM 2 P U B2564 -83.235 -63.561 -15.178 1.00 0.01 P
ATOM 3 OP1 U B2564 -83.813 -63.826 -13.844 1.00 0.01 O
ATOM 4 OP2 U B2564 -82.913 -62.190 -15.549 1.00 0.01 O
ATOM 5 O5' U B2564 -81.967 -64.489 -15.442 1.00 0.01 O
ATOM 6 C5' U B2564 -82.066 -65.902 -15.344 1.00 0.01 C
ATOM 7 C4' U B2564 -80.789 -66.583 -15.736 1.00 0.01 C
ATOM 8 O4' U B2564 -80.537 -66.347 -17.122 1.00 0.01 O
ATOM 9 C3' U B2564 -79.542 -66.099 -15.046 1.00 0.01 C
ATOM 10 O3' U B2564 -79.359 -66.710 -13.809 1.00 0.01 O
ATOM 11 C2' U B2564 -78.450 -66.433 -16.049 1.00 0.01 C
ATOM 12 O2' U B2564 -78.095 -67.808 -15.977 1.00 0.01 O
ATOM 13 C1' U B2564 -79.165 -66.192 -17.356 1.00 0.01 C
ATOM 14 N1 U B2564 -78.947 -64.844 -17.898 1.00 0.01 N
ATOM 15 C2 U B2564 -77.980 -64.732 -18.812 1.00 0.01 C
ATOM 16 O2 U B2564 -77.338 -65.700 -19.047 1.00 0.01 O
ATOM 17 N3 U B2564 -77.775 -63.514 -19.392 1.00 0.01 N
ATOM 18 C4 U B2564 -78.482 -62.378 -19.145 1.00 0.01 C
ATOM 19 O4 U B2564 -78.191 -61.339 -19.732 1.00 0.01 O
ATOM 20 C5 U B2564 -79.513 -62.546 -18.173 1.00 0.01 C
ATOM 21 C6 U B2564 -79.710 -63.748 -17.610 1.00 0.01 C
ATOM 22 P A B2565 -78.065 -66.411 -12.954 1.00 0.01 P
ATOM 23 OP1 A B2565 -76.970 -66.240 -13.874 1.00 0.01 O
ATOM 24 OP2 A B2565 -77.967 -67.454 -11.935 1.00 0.01 O
ATOM 25 O5' A B2565 -78.433 -65.048 -12.280 1.00 0.01 O
TER
ATOM 2 P A A2506 -66.430 -64.911 -26.046 1.00 0.01 P
ATOM 3 OP1 A A2506 -66.429 -66.241 -26.609 1.00 0.01 O
ATOM 4 OP2 A A2506 -65.825 -63.837 -26.814 1.00 0.01 O
ATOM 5 O5' A A2506 -67.872 -64.495 -25.634 1.00 0.01 O
ATOM 6 C5' A A2506 -68.943 -65.370 -25.809 1.00 0.01 C
ATOM 7 C4' A A2506 -69.434 -65.850 -24.502 1.00 0.01 C
ATOM 8 O4' A A2506 -69.657 -64.729 -23.633 1.00 0.01 O
ATOM 9 C3' A A2506 -70.747 -66.574 -24.510 1.00 0.01 C
ATOM 10 O3' A A2506 -70.605 -67.920 -24.911 1.00 0.01 O
ATOM 11 C2' A A2506 -71.173 -66.434 -23.063 1.00 0.01 C
ATOM 12 O2' A A2506 -70.500 -67.393 -22.265 1.00 0.01 O
ATOM 13 C1' A A2506 -70.629 -65.060 -22.696 1.00 0.01 C
ATOM 14 N9 A A2506 -71.652 -64.007 -22.686 1.00 0.01 N
ATOM 15 C8 A A2506 -71.534 -62.796 -23.275 1.00 0.01 C
ATOM 16 N7 A A2506 -72.548 -62.009 -23.075 1.00 0.01 N
ATOM 17 C5 A A2506 -73.388 -62.752 -22.287 1.00 0.01 C
ATOM 18 C6 A A2506 -74.634 -62.477 -21.724 1.00 0.01 C
ATOM 19 N6 A A2506 -75.313 -61.339 -21.870 1.00 0.01 N
ATOM 20 N1 A A2506 -75.197 -63.424 -20.980 1.00 0.01 N
ATOM 21 C2 A A2506 -74.549 -64.564 -20.810 1.00 0.01 C
ATOM 22 N3 A A2506 -73.377 -64.921 -21.283 1.00 0.01 N
ATOM 23 C4 A A2506 -72.839 -63.968 -22.026 1.00 0.01 C
ATOM 24 P U A2507 -71.148 -68.430 -26.324 1.00 0.01 P
ATOM 25 OP1 U A2507 -70.123 -69.280 -26.900 1.00 0.01 O
ATOM 26 OP2 U A2507 -71.607 -67.263 -27.078 1.00 0.01 O
ATOM 27 O5' U A2507 -72.375 -69.303 -25.909 1.00 0.01 O
TER
ATOM 1 O3' G B2563 -84.278 -64.086 -16.235 1.00 0.01 O
ATOM 2 P U B2564 -83.235 -63.561 -15.178 1.00 0.01 P
ATOM 3 OP1 U B2564 -83.813 -63.826 -13.844 1.00 0.01 O
ATOM 4 OP2 U B2564 -82.913 -62.190 -15.549 1.00 0.01 O
ATOM 5 O5' U B2564 -81.967 -64.489 -15.442 1.00 0.01 O
ATOM 6 C5' U B2564 -82.066 -65.902 -15.344 1.00 0.01 C
ATOM 7 C4' U B2564 -80.789 -66.583 -15.736 1.00 0.01 C
ATOM 8 O4' U B2564 -80.537 -66.347 -17.122 1.00 0.01 O
ATOM 9 C3' U B2564 -79.542 -66.099 -15.046 1.00 0.01 C
ATOM 10 O3' U B2564 -79.359 -66.710 -13.809 1.00 0.01 O
ATOM 11 C2' U B2564 -78.450 -66.433 -16.049 1.00 0.01 C
ATOM 12 O2' U B2564 -78.095 -67.808 -15.977 1.00 0.01 O
ATOM 13 C1' U B2564 -79.165 -66.192 -17.356 1.00 0.01 C
ATOM 14 N1 U B2564 -78.947 -64.844 -17.898 1.00 0.01 N
ATOM 15 C2 U B2564 -77.980 -64.732 -18.812 1.00 0.01 C
ATOM 16 O2 U B2564 -77.338 -65.700 -19.047 1.00 0.01 O
ATOM 17 N3 U B2564 -77.775 -63.514 -19.392 1.00 0.01 N
ATOM 18 C4 U B2564 -78.482 -62.378 -19.145 1.00 0.01 C
ATOM 19 O4 U B2564 -78.191 -61.339 -19.732 1.00 0.01 O
ATOM 20 C5 U B2564 -79.513 -62.546 -18.173 1.00 0.01 C
ATOM 21 C6 U B2564 -79.710 -63.748 -17.610 1.00 0.01 C
ATOM 22 P A B2565 -78.065 -66.411 -12.954 1.00 0.01 P
ATOM 23 OP1 A B2565 -76.970 -66.240 -13.874 1.00 0.01 O
ATOM 24 OP2 A B2565 -77.967 -67.454 -11.935 1.00 0.01 O
ATOM 25 O5' A B2565 -78.433 -65.048 -12.280 1.00 0.01 O
TER
Atoms:
OP1: (-66.429,-66.241,-26.609)
OP2: (-65.825,-63.837,-26.814)
C3': (-70.747,-66.574,-24.510)
C1': (-70.629,-65.060,-22.696)
C5': (-68.943,-65.370,-25.809)
O4': (-69.657,-64.729,-23.633)
C8: (-71.534,-62.796,-23.275)
O2': (-70.500,-67.393,-22.265)
C6: (-74.634,-62.477,-21.724)
C5: (-73.388,-62.752,-22.287)
C4: (-72.839,-63.968,-22.026)
P: (-66.430,-64.911,-26.046)
C4': (-69.434,-65.850,-24.502)
C2': (-71.173,-66.434,-23.063)
C2: (-74.549,-64.564,-20.810)
N1: (-75.197,-63.424,-20.980)
N3: (-73.377,-64.921,-21.283)
N6: (-75.313,-61.339,-21.870)
N7: (-72.548,-62.009,-23.075)
N9: (-71.652,-64.007,-22.686)
O5': (-67.872,-64.495,-25.634)
O3': (-70.605,-67.920,-24.911)
OP2: (-65.825,-63.837,-26.814)
C3': (-70.747,-66.574,-24.510)
C1': (-70.629,-65.060,-22.696)
C5': (-68.943,-65.370,-25.809)
O4': (-69.657,-64.729,-23.633)
C8: (-71.534,-62.796,-23.275)
O2': (-70.500,-67.393,-22.265)
C6: (-74.634,-62.477,-21.724)
C5: (-73.388,-62.752,-22.287)
C4: (-72.839,-63.968,-22.026)
P: (-66.430,-64.911,-26.046)
C4': (-69.434,-65.850,-24.502)
C2': (-71.173,-66.434,-23.063)
C2: (-74.549,-64.564,-20.810)
N1: (-75.197,-63.424,-20.980)
N3: (-73.377,-64.921,-21.283)
N6: (-75.313,-61.339,-21.870)
N7: (-72.548,-62.009,-23.075)
N9: (-71.652,-64.007,-22.686)
O5': (-67.872,-64.495,-25.634)
O3': (-70.605,-67.920,-24.911)
C4: (-78.482,-62.378,-19.145)
N3: (-77.775,-63.514,-19.392)
OP1: (-83.813,-63.826,-13.844)
OP2: (-82.913,-62.190,-15.549)
C2: (-77.980,-64.732,-18.812)
C1': (-79.165,-66.192,-17.356)
C3': (-79.542,-66.099,-15.046)
O5': (-81.967,-64.489,-15.442)
O4': (-80.537,-66.347,-17.122)
C5': (-82.066,-65.902,-15.344)
P: (-83.235,-63.561,-15.178)
C4': (-80.789,-66.583,-15.736)
C2': (-78.450,-66.433,-16.049)
O2': (-78.095,-67.808,-15.977)
N1: (-78.947,-64.844,-17.898)
O4: (-78.191,-61.339,-19.732)
O2: (-77.338,-65.700,-19.047)
C6: (-79.710,-63.748,-17.610)
C5: (-79.513,-62.546,-18.173)
O3': (-79.359,-66.710,-13.809)
N3: (-77.775,-63.514,-19.392)
OP1: (-83.813,-63.826,-13.844)
OP2: (-82.913,-62.190,-15.549)
C2: (-77.980,-64.732,-18.812)
C1': (-79.165,-66.192,-17.356)
C3': (-79.542,-66.099,-15.046)
O5': (-81.967,-64.489,-15.442)
O4': (-80.537,-66.347,-17.122)
C5': (-82.066,-65.902,-15.344)
P: (-83.235,-63.561,-15.178)
C4': (-80.789,-66.583,-15.736)
C2': (-78.450,-66.433,-16.049)
O2': (-78.095,-67.808,-15.977)
N1: (-78.947,-64.844,-17.898)
O4: (-78.191,-61.339,-19.732)
O2: (-77.338,-65.700,-19.047)
C6: (-79.710,-63.748,-17.610)
C5: (-79.513,-62.546,-18.173)
O3': (-79.359,-66.710,-13.809)
Image (generated by PyMOL):