Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1GTR:B5:B63
Extra
PDB:
ATOM 1 O3' U A 4 28.862 33.245 28.040 1.00 18.60 O
ATOM 2 P A A 5 27.304 33.161 28.426 1.00 21.45 P
ATOM 3 OP1 A A 5 26.650 32.497 27.280 1.00 20.70 O
ATOM 4 OP2 A A 5 26.720 34.388 29.006 1.00 22.82 O
ATOM 5 O5' A A 5 27.504 32.098 29.604 1.00 22.30 O
ATOM 6 C5' A A 5 26.456 31.773 30.505 1.00 23.91 C
ATOM 7 C4' A A 5 26.974 30.801 31.554 1.00 25.41 C
ATOM 8 O4' A A 5 27.995 31.458 32.317 1.00 25.94 O
ATOM 9 C3' A A 5 25.906 30.388 32.555 1.00 25.66 C
ATOM 10 O3' A A 5 26.300 29.157 33.174 1.00 25.14 O
ATOM 11 C2' A A 5 25.984 31.523 33.541 1.00 25.79 C
ATOM 12 O2' A A 5 25.507 31.103 34.823 1.00 28.34 O
ATOM 13 C1' A A 5 27.470 31.788 33.607 1.00 25.24 C
ATOM 14 N9 A A 5 27.677 33.203 33.903 1.00 23.73 N
ATOM 15 C8 A A 5 27.598 34.279 33.061 1.00 23.10 C
ATOM 16 N7 A A 5 27.821 35.418 33.647 1.00 23.93 N
ATOM 17 C5 A A 5 28.064 35.066 34.967 1.00 23.46 C
ATOM 18 C6 A A 5 28.361 35.823 36.094 1.00 24.01 C
ATOM 19 N6 A A 5 28.472 37.146 36.049 1.00 25.21 N
ATOM 20 N1 A A 5 28.539 35.166 37.246 1.00 24.98 N
ATOM 21 C2 A A 5 28.428 33.845 37.267 1.00 25.30 C
ATOM 22 N3 A A 5 28.153 33.015 36.277 1.00 24.45 N
ATOM 23 C4 A A 5 27.979 33.715 35.134 1.00 24.31 C
ATOM 24 P U A 6 26.050 27.764 32.413 1.00 26.62 P
ATOM 25 OP1 U A 6 26.488 27.271 33.738 1.00 27.62 O
ATOM 26 OP2 U A 6 26.503 27.068 31.193 1.00 27.76 O
ATOM 27 O5' U A 6 24.439 27.793 32.386 1.00 24.76 O
TER
ATOM 1 O3' G B 62 30.164 40.658 45.836 1.00 44.97 O
ATOM 2 P U B 63 31.674 40.425 45.303 1.00 43.96 P
ATOM 3 OP1 U B 63 32.700 40.491 46.369 1.00 44.28 O
ATOM 4 OP2 U B 63 31.834 41.251 44.084 1.00 43.72 O
ATOM 5 O5' U B 63 31.501 38.877 44.873 1.00 41.70 O
ATOM 6 C5' U B 63 31.182 37.890 45.863 1.00 40.35 C
ATOM 7 C4' U B 63 30.603 36.614 45.259 1.00 39.84 C
ATOM 8 O4' U B 63 29.467 36.869 44.418 1.00 40.16 O
ATOM 9 C3' U B 63 31.597 36.006 44.316 1.00 39.34 C
ATOM 10 O3' U B 63 32.598 35.300 45.052 1.00 38.40 O
ATOM 11 C2' U B 63 30.738 35.070 43.507 1.00 40.06 C
ATOM 12 O2' U B 63 30.401 33.891 44.243 1.00 40.44 O
ATOM 13 C1' U B 63 29.476 35.905 43.335 1.00 39.32 C
ATOM 14 N1 U B 63 29.461 36.585 42.000 1.00 38.26 N
ATOM 15 C2 U B 63 29.110 35.843 40.871 1.00 37.19 C
ATOM 16 O2 U B 63 28.865 34.640 40.897 1.00 36.06 O
ATOM 17 N3 U B 63 29.069 36.546 39.678 1.00 36.50 N
ATOM 18 C4 U B 63 29.341 37.892 39.508 1.00 36.42 C
ATOM 19 O4 U B 63 29.244 38.423 38.408 1.00 35.79 O
ATOM 20 C5 U B 63 29.701 38.577 40.717 1.00 37.07 C
ATOM 21 C6 U B 63 29.749 37.921 41.893 1.00 37.62 C
ATOM 22 P A B 64 34.074 35.140 44.443 1.00 37.59 P
ATOM 23 OP1 A B 64 35.079 34.654 45.420 1.00 38.39 O
ATOM 24 OP2 A B 64 34.299 36.428 43.739 1.00 37.59 O
ATOM 25 O5' A B 64 33.876 33.986 43.349 1.00 33.80 O
TER
ATOM 2 P A A 5 27.304 33.161 28.426 1.00 21.45 P
ATOM 3 OP1 A A 5 26.650 32.497 27.280 1.00 20.70 O
ATOM 4 OP2 A A 5 26.720 34.388 29.006 1.00 22.82 O
ATOM 5 O5' A A 5 27.504 32.098 29.604 1.00 22.30 O
ATOM 6 C5' A A 5 26.456 31.773 30.505 1.00 23.91 C
ATOM 7 C4' A A 5 26.974 30.801 31.554 1.00 25.41 C
ATOM 8 O4' A A 5 27.995 31.458 32.317 1.00 25.94 O
ATOM 9 C3' A A 5 25.906 30.388 32.555 1.00 25.66 C
ATOM 10 O3' A A 5 26.300 29.157 33.174 1.00 25.14 O
ATOM 11 C2' A A 5 25.984 31.523 33.541 1.00 25.79 C
ATOM 12 O2' A A 5 25.507 31.103 34.823 1.00 28.34 O
ATOM 13 C1' A A 5 27.470 31.788 33.607 1.00 25.24 C
ATOM 14 N9 A A 5 27.677 33.203 33.903 1.00 23.73 N
ATOM 15 C8 A A 5 27.598 34.279 33.061 1.00 23.10 C
ATOM 16 N7 A A 5 27.821 35.418 33.647 1.00 23.93 N
ATOM 17 C5 A A 5 28.064 35.066 34.967 1.00 23.46 C
ATOM 18 C6 A A 5 28.361 35.823 36.094 1.00 24.01 C
ATOM 19 N6 A A 5 28.472 37.146 36.049 1.00 25.21 N
ATOM 20 N1 A A 5 28.539 35.166 37.246 1.00 24.98 N
ATOM 21 C2 A A 5 28.428 33.845 37.267 1.00 25.30 C
ATOM 22 N3 A A 5 28.153 33.015 36.277 1.00 24.45 N
ATOM 23 C4 A A 5 27.979 33.715 35.134 1.00 24.31 C
ATOM 24 P U A 6 26.050 27.764 32.413 1.00 26.62 P
ATOM 25 OP1 U A 6 26.488 27.271 33.738 1.00 27.62 O
ATOM 26 OP2 U A 6 26.503 27.068 31.193 1.00 27.76 O
ATOM 27 O5' U A 6 24.439 27.793 32.386 1.00 24.76 O
TER
ATOM 1 O3' G B 62 30.164 40.658 45.836 1.00 44.97 O
ATOM 2 P U B 63 31.674 40.425 45.303 1.00 43.96 P
ATOM 3 OP1 U B 63 32.700 40.491 46.369 1.00 44.28 O
ATOM 4 OP2 U B 63 31.834 41.251 44.084 1.00 43.72 O
ATOM 5 O5' U B 63 31.501 38.877 44.873 1.00 41.70 O
ATOM 6 C5' U B 63 31.182 37.890 45.863 1.00 40.35 C
ATOM 7 C4' U B 63 30.603 36.614 45.259 1.00 39.84 C
ATOM 8 O4' U B 63 29.467 36.869 44.418 1.00 40.16 O
ATOM 9 C3' U B 63 31.597 36.006 44.316 1.00 39.34 C
ATOM 10 O3' U B 63 32.598 35.300 45.052 1.00 38.40 O
ATOM 11 C2' U B 63 30.738 35.070 43.507 1.00 40.06 C
ATOM 12 O2' U B 63 30.401 33.891 44.243 1.00 40.44 O
ATOM 13 C1' U B 63 29.476 35.905 43.335 1.00 39.32 C
ATOM 14 N1 U B 63 29.461 36.585 42.000 1.00 38.26 N
ATOM 15 C2 U B 63 29.110 35.843 40.871 1.00 37.19 C
ATOM 16 O2 U B 63 28.865 34.640 40.897 1.00 36.06 O
ATOM 17 N3 U B 63 29.069 36.546 39.678 1.00 36.50 N
ATOM 18 C4 U B 63 29.341 37.892 39.508 1.00 36.42 C
ATOM 19 O4 U B 63 29.244 38.423 38.408 1.00 35.79 O
ATOM 20 C5 U B 63 29.701 38.577 40.717 1.00 37.07 C
ATOM 21 C6 U B 63 29.749 37.921 41.893 1.00 37.62 C
ATOM 22 P A B 64 34.074 35.140 44.443 1.00 37.59 P
ATOM 23 OP1 A B 64 35.079 34.654 45.420 1.00 38.39 O
ATOM 24 OP2 A B 64 34.299 36.428 43.739 1.00 37.59 O
ATOM 25 O5' A B 64 33.876 33.986 43.349 1.00 33.80 O
TER
Atoms:
OP1: (26.650,32.497,27.280)
OP2: (26.720,34.388,29.006)
C3': (25.906,30.388,32.555)
C1': (27.470,31.788,33.607)
C5': (26.456,31.773,30.505)
O4': (27.995,31.458,32.317)
C8: (27.598,34.279,33.061)
O2': (25.507,31.103,34.823)
C6: (28.361,35.823,36.094)
C5: (28.064,35.066,34.967)
C4: (27.979,33.715,35.134)
P: (27.304,33.161,28.426)
C4': (26.974,30.801,31.554)
C2': (25.984,31.523,33.541)
C2: (28.428,33.845,37.267)
N1: (28.539,35.166,37.246)
N3: (28.153,33.015,36.277)
N6: (28.472,37.146,36.049)
N7: (27.821,35.418,33.647)
N9: (27.677,33.203,33.903)
O5': (27.504,32.098,29.604)
O3': (26.300,29.157,33.174)
OP2: (26.720,34.388,29.006)
C3': (25.906,30.388,32.555)
C1': (27.470,31.788,33.607)
C5': (26.456,31.773,30.505)
O4': (27.995,31.458,32.317)
C8: (27.598,34.279,33.061)
O2': (25.507,31.103,34.823)
C6: (28.361,35.823,36.094)
C5: (28.064,35.066,34.967)
C4: (27.979,33.715,35.134)
P: (27.304,33.161,28.426)
C4': (26.974,30.801,31.554)
C2': (25.984,31.523,33.541)
C2: (28.428,33.845,37.267)
N1: (28.539,35.166,37.246)
N3: (28.153,33.015,36.277)
N6: (28.472,37.146,36.049)
N7: (27.821,35.418,33.647)
N9: (27.677,33.203,33.903)
O5': (27.504,32.098,29.604)
O3': (26.300,29.157,33.174)
C4: (29.341,37.892,39.508)
N3: (29.069,36.546,39.678)
OP1: (32.700,40.491,46.369)
OP2: (31.834,41.251,44.084)
C2: (29.110,35.843,40.871)
C1': (29.476,35.905,43.335)
C3': (31.597,36.006,44.316)
O5': (31.501,38.877,44.873)
O4': (29.467,36.869,44.418)
C5': (31.182,37.890,45.863)
P: (31.674,40.425,45.303)
C4': (30.603,36.614,45.259)
C2': (30.738,35.070,43.507)
O2': (30.401,33.891,44.243)
N1: (29.461,36.585,42.000)
O4: (29.244,38.423,38.408)
O2: (28.865,34.640,40.897)
C6: (29.749,37.921,41.893)
C5: (29.701,38.577,40.717)
O3': (32.598,35.300,45.052)
N3: (29.069,36.546,39.678)
OP1: (32.700,40.491,46.369)
OP2: (31.834,41.251,44.084)
C2: (29.110,35.843,40.871)
C1': (29.476,35.905,43.335)
C3': (31.597,36.006,44.316)
O5': (31.501,38.877,44.873)
O4': (29.467,36.869,44.418)
C5': (31.182,37.890,45.863)
P: (31.674,40.425,45.303)
C4': (30.603,36.614,45.259)
C2': (30.738,35.070,43.507)
O2': (30.401,33.891,44.243)
N1: (29.461,36.585,42.000)
O4: (29.244,38.423,38.408)
O2: (28.865,34.640,40.897)
C6: (29.749,37.921,41.893)
C5: (29.701,38.577,40.717)
O3': (32.598,35.300,45.052)
Image (generated by PyMOL):