ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIO:X81:X112

Extra

PDB:
ATOM 1 O3' A A 80 20.904 16.881 24.563 1.00 9.17 O
ATOM 2 P A A 81 19.467 17.597 24.486 1.00 8.09 P
ATOM 3 OP1 A A 81 19.028 17.833 25.878 1.00 9.05 O
ATOM 4 OP2 A A 81 18.599 16.819 23.584 1.00 7.71 O
ATOM 5 O5' A A 81 19.802 19.034 23.867 1.00 8.18 O
ATOM 6 C5' A A 81 19.271 19.458 22.625 1.00 7.35 C
ATOM 7 C4' A A 81 20.293 20.355 21.952 1.00 7.93 C
ATOM 8 O4' A A 81 21.444 19.599 21.479 1.00 6.95 O
ATOM 9 C3' A A 81 19.789 21.066 20.711 1.00 7.65 C
ATOM 10 O3' A A 81 19.015 22.182 21.071 1.00 8.62 O
ATOM 11 C2' A A 81 21.119 21.441 20.066 1.00 6.90 C
ATOM 12 O2' A A 81 21.779 22.517 20.705 1.00 6.85 O
ATOM 13 C1' A A 81 21.898 20.149 20.258 1.00 5.85 C
ATOM 14 N9 A A 81 21.693 19.191 19.165 1.00 6.01 N
ATOM 15 C8 A A 81 20.883 18.085 19.154 1.00 5.42 C
ATOM 16 N7 A A 81 20.902 17.424 18.020 1.00 5.56 N
ATOM 17 C5 A A 81 21.789 18.145 17.231 1.00 4.79 C
ATOM 18 C6 A A 81 22.259 17.972 15.910 1.00 3.92 C
ATOM 19 N6 A A 81 21.877 16.970 15.121 1.00 3.90 N
ATOM 20 N1 A A 81 23.142 18.872 15.425 1.00 4.02 N
ATOM 21 C2 A A 81 23.537 19.886 16.210 1.00 4.29 C
ATOM 22 N3 A A 81 23.170 20.153 17.464 1.00 4.84 N
ATOM 23 C4 A A 81 22.287 19.237 17.921 1.00 5.04 C
ATOM 24 P G A 82 17.903 22.738 20.073 1.00 10.29 P
ATOM 25 OP1 G A 82 17.089 23.731 20.807 1.00 11.75 O
ATOM 26 OP2 G A 82 17.255 21.594 19.398 1.00 10.80 O
ATOM 27 O5' G A 82 18.768 23.483 18.964 1.00 10.80 O
TER

ATOM 1 O3' C B 111 26.996 18.920 5.632 1.00 17.09 O
ATOM 2 P U B 112 28.033 17.956 6.368 1.00 18.21 P
ATOM 3 OP1 U B 112 29.303 18.067 5.611 1.00 18.47 O
ATOM 4 OP2 U B 112 27.397 16.632 6.563 1.00 17.44 O
ATOM 5 O5' U B 112 28.199 18.614 7.819 1.00 16.81 O
ATOM 6 C5' U B 112 28.929 19.816 8.021 1.00 15.19 C
ATOM 7 C4' U B 112 28.748 20.320 9.443 1.00 14.26 C
ATOM 8 O4' U B 112 27.341 20.560 9.706 1.00 14.25 O
ATOM 9 C3' U B 112 29.150 19.363 10.561 1.00 13.83 C
ATOM 10 O3' U B 112 30.550 19.397 10.790 1.00 13.71 O
ATOM 11 C2' U B 112 28.418 19.991 11.738 1.00 13.07 C
ATOM 12 O2' U B 112 29.131 21.093 12.268 1.00 11.95 O
ATOM 13 C1' U B 112 27.098 20.428 11.096 1.00 12.42 C
ATOM 14 N1 U B 112 25.998 19.441 11.367 1.00 11.48 N
ATOM 15 C2 U B 112 25.310 19.540 12.570 1.00 10.94 C
ATOM 16 O2 U B 112 25.535 20.392 13.411 1.00 10.84 O
ATOM 17 N3 U B 112 24.329 18.599 12.764 1.00 10.13 N
ATOM 18 C4 U B 112 23.976 17.581 11.898 1.00 9.77 C
ATOM 19 O4 U B 112 23.074 16.819 12.224 1.00 9.72 O
ATOM 20 C5 U B 112 24.732 17.535 10.662 1.00 9.82 C
ATOM 21 C6 U B 112 25.697 18.442 10.448 1.00 10.23 C
ATOM 22 P G B 113 31.433 18.072 10.815 1.00 13.08 P
ATOM 23 OP1 G B 113 32.817 18.547 10.626 1.00 13.82 O
ATOM 24 OP2 G B 113 30.850 17.035 9.934 1.00 13.03 O
ATOM 25 O5' G B 113 31.356 17.578 12.330 1.00 13.29 O
TER

Atoms:
OP1: (19.028,17.833,25.878)
OP2: (18.599,16.819,23.584)
C3': (19.789,21.066,20.711)
C1': (21.898,20.149,20.258)
C5': (19.271,19.458,22.625)
O4': (21.444,19.599,21.479)
C8: (20.883,18.085,19.154)
O2': (21.779,22.517,20.705)
C6: (22.259,17.972,15.910)
C5: (21.789,18.145,17.231)
C4: (22.287,19.237,17.921)
P: (19.467,17.597,24.486)
C4': (20.293,20.355,21.952)
C2': (21.119,21.441,20.066)
C2: (23.537,19.886,16.210)
N1: (23.142,18.872,15.425)
N3: (23.170,20.153,17.464)
N6: (21.877,16.970,15.121)
N7: (20.902,17.424,18.020)
N9: (21.693,19.191,19.165)
O5': (19.802,19.034,23.867)
O3': (19.015,22.182,21.071)
C4: (23.976,17.581,11.898)
N3: (24.329,18.599,12.764)
OP1: (29.303,18.067,5.611)
OP2: (27.397,16.632,6.563)
C2: (25.310,19.540,12.570)
C1': (27.098,20.428,11.096)
C3': (29.150,19.363,10.561)
O5': (28.199,18.614,7.819)
O4': (27.341,20.560,9.706)
C5': (28.929,19.816,8.021)
P: (28.033,17.956,6.368)
C4': (28.748,20.320,9.443)
C2': (28.418,19.991,11.738)
O2': (29.131,21.093,12.268)
N1: (25.998,19.441,11.367)
O4: (23.074,16.819,12.224)
O2: (25.535,20.392,13.411)
C6: (25.697,18.442,10.448)
C5: (24.732,17.535,10.662)
O3': (30.550,19.397,10.790)
Image (generated by PyMOL):
PyMOL image
show in jmol