ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5606:51389

Extra

PDB:
ATOM 1 O3' C A 605 110.597 9.853 219.014 1.00 36.71 O
ATOM 2 P A A 606 110.369 8.353 218.488 1.00 41.32 P
ATOM 3 OP1 A A 606 109.050 7.909 219.001 1.00 41.48 O
ATOM 4 OP2 A A 606 111.575 7.566 218.840 1.00 41.06 O
ATOM 5 O5' A A 606 110.282 8.550 216.916 1.00 41.63 O
ATOM 6 C5' A A 606 109.186 8.070 216.182 1.00 41.99 C
ATOM 7 C4' A A 606 109.410 8.263 214.709 1.00 42.24 C
ATOM 8 O4' A A 606 110.524 9.149 214.495 1.00 42.07 O
ATOM 9 C3' A A 606 109.774 7.019 213.938 1.00 42.36 C
ATOM 10 O3' A A 606 108.650 6.324 213.553 1.00 42.66 O
ATOM 11 C2' A A 606 110.542 7.559 212.765 1.00 42.46 C
ATOM 12 O2' A A 606 109.639 8.099 211.814 1.00 42.82 O
ATOM 13 C1' A A 606 111.283 8.707 213.404 1.00 42.17 C
ATOM 14 N9 A A 606 112.603 8.319 213.900 1.00 41.84 N
ATOM 15 C8 A A 606 112.887 8.293 215.218 1.00 41.52 C
ATOM 16 N7 A A 606 114.117 7.987 215.425 1.00 41.28 N
ATOM 17 C5 A A 606 114.705 7.835 214.170 1.00 41.45 C
ATOM 18 C6 A A 606 116.025 7.531 213.767 1.00 41.33 C
ATOM 19 N6 A A 606 117.027 7.331 214.628 1.00 41.00 N
ATOM 20 N1 A A 606 116.287 7.438 212.469 1.00 41.57 N
ATOM 21 C2 A A 606 115.276 7.681 211.639 1.00 41.91 C
ATOM 22 N3 A A 606 113.997 7.992 211.868 1.00 42.06 N
ATOM 23 C4 A A 606 113.769 8.059 213.199 1.00 41.80 C
ATOM 24 P A A 607 108.406 4.915 214.141 1.00 41.01 P
ATOM 25 OP1 A A 607 106.953 4.626 213.993 1.00 41.33 O
ATOM 26 OP2 A A 607 109.013 4.913 215.477 1.00 40.62 O
ATOM 27 O5' A A 607 109.240 4.008 213.159 1.00 41.09 O
TER

ATOM 1 O3' U B1388 124.989 3.189 209.708 1.00 39.07 O
ATOM 2 P U B1389 125.242 4.722 209.409 1.00 37.79 P
ATOM 3 OP1 U B1389 126.347 4.800 208.422 1.00 37.91 O
ATOM 4 OP2 U B1389 125.382 5.394 210.725 1.00 37.44 O
ATOM 5 O5' U B1389 123.884 5.156 208.731 1.00 38.10 O
ATOM 6 C5' U B1389 123.576 4.816 207.401 1.00 38.47 C
ATOM 7 C4' U B1389 122.198 5.303 207.027 1.00 38.72 C
ATOM 8 O4' U B1389 121.192 4.655 207.834 1.00 38.67 O
ATOM 9 C3' U B1389 121.921 6.773 207.255 1.00 38.65 C
ATOM 10 O3' U B1389 122.499 7.548 206.258 1.00 38.81 O
ATOM 11 C2' U B1389 120.418 6.795 207.235 1.00 38.85 C
ATOM 12 O2' U B1389 119.968 6.560 205.922 1.00 39.25 O
ATOM 13 C1' U B1389 120.120 5.547 208.039 1.00 38.73 C
ATOM 14 N1 U B1389 120.022 5.832 209.462 1.00 38.39 N
ATOM 15 C2 U B1389 118.800 6.257 209.930 1.00 38.43 C
ATOM 16 O2 U B1389 117.881 6.415 209.177 1.00 38.74 O
ATOM 17 N3 U B1389 118.705 6.500 211.280 1.00 38.13 N
ATOM 18 C4 U B1389 119.780 6.347 212.158 1.00 37.78 C
ATOM 19 O4 U B1389 119.665 6.609 213.355 1.00 37.53 O
ATOM 20 C5 U B1389 121.004 5.898 211.578 1.00 37.76 C
ATOM 21 C6 U B1389 121.085 5.639 210.281 1.00 38.06 C
ATOM 22 P G B1390 122.664 9.114 206.404 1.00 38.76 P
ATOM 23 OP1 G B1390 123.002 9.623 205.028 1.00 39.07 O
ATOM 24 OP2 G B1390 123.593 9.340 207.518 1.00 38.37 O
ATOM 25 O5' G B1390 121.226 9.606 206.777 1.00 38.84 O
TER

Atoms:
OP1: (109.050,7.909,219.001)
OP2: (111.575,7.566,218.840)
C3': (109.774,7.019,213.938)
C1': (111.283,8.707,213.404)
C5': (109.186,8.070,216.182)
O4': (110.524,9.149,214.495)
C8: (112.887,8.293,215.218)
O2': (109.639,8.099,211.814)
C6: (116.025,7.531,213.767)
C5: (114.705,7.835,214.170)
C4: (113.769,8.059,213.199)
P: (110.369,8.353,218.488)
C4': (109.410,8.263,214.709)
C2': (110.542,7.559,212.765)
C2: (115.276,7.681,211.639)
N1: (116.287,7.438,212.469)
N3: (113.997,7.992,211.868)
N6: (117.027,7.331,214.628)
N7: (114.117,7.987,215.425)
N9: (112.603,8.319,213.900)
O5': (110.282,8.550,216.916)
O3': (108.650,6.324,213.553)
C4: (119.780,6.347,212.158)
N3: (118.705,6.500,211.280)
OP1: (126.347,4.800,208.422)
OP2: (125.382,5.394,210.725)
C2: (118.800,6.257,209.930)
C1': (120.120,5.547,208.039)
C3': (121.921,6.773,207.255)
O5': (123.884,5.156,208.731)
O4': (121.192,4.655,207.834)
C5': (123.576,4.816,207.401)
P: (125.242,4.722,209.409)
C4': (122.198,5.303,207.027)
C2': (120.418,6.795,207.235)
O2': (119.968,6.560,205.922)
N1: (120.022,5.832,209.462)
O4: (119.665,6.609,213.355)
O2: (117.881,6.415,209.177)
C6: (121.085,5.639,210.281)
C5: (121.004,5.898,211.578)
O3': (122.499,7.548,206.258)
Image (generated by PyMOL):
PyMOL image
show in jmol