Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02331:02372
Extra
PDB:
ATOM 1 O3' G A2330 56.989 115.023 110.889 1.00 40.66 O
ATOM 2 P A A2331 57.043 113.845 111.982 1.00 43.26 P
ATOM 3 OP1 A A2331 56.145 114.224 113.114 1.00 41.09 O
ATOM 4 OP2 A A2331 58.466 113.511 112.247 1.00 42.21 O
ATOM 5 O5' A A2331 56.426 112.585 111.233 1.00 41.47 O
ATOM 6 C5' A A2331 55.070 112.581 110.793 1.00 37.81 C
ATOM 7 C4' A A2331 54.807 111.347 109.978 1.00 39.55 C
ATOM 8 O4' A A2331 55.626 111.366 108.777 1.00 38.64 O
ATOM 9 C3' A A2331 55.182 110.041 110.655 1.00 39.57 C
ATOM 10 O3' A A2331 54.165 109.623 111.556 1.00 41.07 O
ATOM 11 C2' A A2331 55.342 109.105 109.464 1.00 40.69 C
ATOM 12 O2' A A2331 54.100 108.667 108.943 1.00 41.64 O
ATOM 13 C1' A A2331 56.007 110.038 108.446 1.00 39.71 C
ATOM 14 N9 A A2331 57.469 109.954 108.462 1.00 37.51 N
ATOM 15 C8 A A2331 58.373 110.871 108.935 1.00 38.16 C
ATOM 16 N7 A A2331 59.623 110.504 108.787 1.00 38.08 N
ATOM 17 C5 A A2331 59.537 109.262 108.180 1.00 36.54 C
ATOM 18 C6 A A2331 60.515 108.356 107.738 1.00 37.83 C
ATOM 19 N6 A A2331 61.827 108.572 107.843 1.00 37.34 N
ATOM 20 N1 A A2331 60.094 107.206 107.169 1.00 38.66 N
ATOM 21 C2 A A2331 58.778 106.995 107.050 1.00 38.78 C
ATOM 22 N3 A A2331 57.762 107.775 107.420 1.00 38.27 N
ATOM 23 C4 A A2331 58.216 108.907 107.982 1.00 37.04 C
ATOM 24 P G A2332 54.566 108.889 112.926 1.00 39.30 P
ATOM 25 OP1 G A2332 53.347 108.892 113.770 1.00 38.22 O
ATOM 26 OP2 G A2332 55.819 109.494 113.444 1.00 39.44 O
ATOM 27 O5' G A2332 54.900 107.397 112.483 1.00 38.43 O
TER
ATOM 1 O3' C B2371 67.358 99.731 106.031 1.00 42.38 O
ATOM 2 P U B2372 67.033 100.110 104.505 1.00 41.85 P
ATOM 3 OP1 U B2372 67.305 98.881 103.714 1.00 41.88 O
ATOM 4 OP2 U B2372 67.728 101.377 104.161 1.00 40.85 O
ATOM 5 O5' U B2372 65.467 100.387 104.496 1.00 42.05 O
ATOM 6 C5' U B2372 64.519 99.352 104.818 1.00 39.75 C
ATOM 7 C4' U B2372 63.128 99.930 104.872 1.00 38.38 C
ATOM 8 O4' U B2372 63.084 100.962 105.885 1.00 39.91 O
ATOM 9 C3' U B2372 62.695 100.664 103.615 1.00 38.45 C
ATOM 10 O3' U B2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 11 C2' U B2372 61.589 101.583 104.130 1.00 39.03 C
ATOM 12 O2' U B2372 60.328 100.951 104.229 1.00 39.95 O
ATOM 13 C1' U B2372 62.082 101.905 105.545 1.00 39.24 C
ATOM 14 N1 U B2372 62.591 103.269 105.770 1.00 38.04 N
ATOM 15 C2 U B2372 61.666 104.244 106.107 1.00 39.03 C
ATOM 16 O2 U B2372 60.472 104.018 106.217 1.00 41.70 O
ATOM 17 N3 U B2372 62.189 105.497 106.310 1.00 37.81 N
ATOM 18 C4 U B2372 63.509 105.873 106.209 1.00 36.64 C
ATOM 19 O4 U B2372 63.818 107.050 106.397 1.00 33.19 O
ATOM 20 C5 U B2372 64.404 104.812 105.856 1.00 36.63 C
ATOM 21 C6 U B2372 63.927 103.578 105.654 1.00 36.25 C
ATOM 22 P A B2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 23 OP1 A B2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 24 OP2 A B2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 25 O5' A B2373 61.529 101.142 100.693 1.00 41.52 O
TER
ATOM 2 P A A2331 57.043 113.845 111.982 1.00 43.26 P
ATOM 3 OP1 A A2331 56.145 114.224 113.114 1.00 41.09 O
ATOM 4 OP2 A A2331 58.466 113.511 112.247 1.00 42.21 O
ATOM 5 O5' A A2331 56.426 112.585 111.233 1.00 41.47 O
ATOM 6 C5' A A2331 55.070 112.581 110.793 1.00 37.81 C
ATOM 7 C4' A A2331 54.807 111.347 109.978 1.00 39.55 C
ATOM 8 O4' A A2331 55.626 111.366 108.777 1.00 38.64 O
ATOM 9 C3' A A2331 55.182 110.041 110.655 1.00 39.57 C
ATOM 10 O3' A A2331 54.165 109.623 111.556 1.00 41.07 O
ATOM 11 C2' A A2331 55.342 109.105 109.464 1.00 40.69 C
ATOM 12 O2' A A2331 54.100 108.667 108.943 1.00 41.64 O
ATOM 13 C1' A A2331 56.007 110.038 108.446 1.00 39.71 C
ATOM 14 N9 A A2331 57.469 109.954 108.462 1.00 37.51 N
ATOM 15 C8 A A2331 58.373 110.871 108.935 1.00 38.16 C
ATOM 16 N7 A A2331 59.623 110.504 108.787 1.00 38.08 N
ATOM 17 C5 A A2331 59.537 109.262 108.180 1.00 36.54 C
ATOM 18 C6 A A2331 60.515 108.356 107.738 1.00 37.83 C
ATOM 19 N6 A A2331 61.827 108.572 107.843 1.00 37.34 N
ATOM 20 N1 A A2331 60.094 107.206 107.169 1.00 38.66 N
ATOM 21 C2 A A2331 58.778 106.995 107.050 1.00 38.78 C
ATOM 22 N3 A A2331 57.762 107.775 107.420 1.00 38.27 N
ATOM 23 C4 A A2331 58.216 108.907 107.982 1.00 37.04 C
ATOM 24 P G A2332 54.566 108.889 112.926 1.00 39.30 P
ATOM 25 OP1 G A2332 53.347 108.892 113.770 1.00 38.22 O
ATOM 26 OP2 G A2332 55.819 109.494 113.444 1.00 39.44 O
ATOM 27 O5' G A2332 54.900 107.397 112.483 1.00 38.43 O
TER
ATOM 1 O3' C B2371 67.358 99.731 106.031 1.00 42.38 O
ATOM 2 P U B2372 67.033 100.110 104.505 1.00 41.85 P
ATOM 3 OP1 U B2372 67.305 98.881 103.714 1.00 41.88 O
ATOM 4 OP2 U B2372 67.728 101.377 104.161 1.00 40.85 O
ATOM 5 O5' U B2372 65.467 100.387 104.496 1.00 42.05 O
ATOM 6 C5' U B2372 64.519 99.352 104.818 1.00 39.75 C
ATOM 7 C4' U B2372 63.128 99.930 104.872 1.00 38.38 C
ATOM 8 O4' U B2372 63.084 100.962 105.885 1.00 39.91 O
ATOM 9 C3' U B2372 62.695 100.664 103.615 1.00 38.45 C
ATOM 10 O3' U B2372 62.211 99.723 102.663 1.00 40.24 O
ATOM 11 C2' U B2372 61.589 101.583 104.130 1.00 39.03 C
ATOM 12 O2' U B2372 60.328 100.951 104.229 1.00 39.95 O
ATOM 13 C1' U B2372 62.082 101.905 105.545 1.00 39.24 C
ATOM 14 N1 U B2372 62.591 103.269 105.770 1.00 38.04 N
ATOM 15 C2 U B2372 61.666 104.244 106.107 1.00 39.03 C
ATOM 16 O2 U B2372 60.472 104.018 106.217 1.00 41.70 O
ATOM 17 N3 U B2372 62.189 105.497 106.310 1.00 37.81 N
ATOM 18 C4 U B2372 63.509 105.873 106.209 1.00 36.64 C
ATOM 19 O4 U B2372 63.818 107.050 106.397 1.00 33.19 O
ATOM 20 C5 U B2372 64.404 104.812 105.856 1.00 36.63 C
ATOM 21 C6 U B2372 63.927 103.578 105.654 1.00 36.25 C
ATOM 22 P A B2373 62.493 99.942 101.097 1.00 40.81 P
ATOM 23 OP1 A B2373 62.003 98.718 100.402 1.00 41.35 O
ATOM 24 OP2 A B2373 63.896 100.386 100.906 1.00 39.79 O
ATOM 25 O5' A B2373 61.529 101.142 100.693 1.00 41.52 O
TER
Atoms:
OP1: (56.145,114.224,113.114)
OP2: (58.466,113.511,112.247)
C3': (55.182,110.041,110.655)
C1': (56.007,110.038,108.446)
C5': (55.070,112.581,110.793)
O4': (55.626,111.366,108.777)
C8: (58.373,110.871,108.935)
O2': (54.100,108.667,108.943)
C6: (60.515,108.356,107.738)
C5: (59.537,109.262,108.180)
C4: (58.216,108.907,107.982)
P: (57.043,113.845,111.982)
C4': (54.807,111.347,109.978)
C2': (55.342,109.105,109.464)
C2: (58.778,106.995,107.050)
N1: (60.094,107.206,107.169)
N3: (57.762,107.775,107.420)
N6: (61.827,108.572,107.843)
N7: (59.623,110.504,108.787)
N9: (57.469,109.954,108.462)
O5': (56.426,112.585,111.233)
O3': (54.165,109.623,111.556)
OP2: (58.466,113.511,112.247)
C3': (55.182,110.041,110.655)
C1': (56.007,110.038,108.446)
C5': (55.070,112.581,110.793)
O4': (55.626,111.366,108.777)
C8: (58.373,110.871,108.935)
O2': (54.100,108.667,108.943)
C6: (60.515,108.356,107.738)
C5: (59.537,109.262,108.180)
C4: (58.216,108.907,107.982)
P: (57.043,113.845,111.982)
C4': (54.807,111.347,109.978)
C2': (55.342,109.105,109.464)
C2: (58.778,106.995,107.050)
N1: (60.094,107.206,107.169)
N3: (57.762,107.775,107.420)
N6: (61.827,108.572,107.843)
N7: (59.623,110.504,108.787)
N9: (57.469,109.954,108.462)
O5': (56.426,112.585,111.233)
O3': (54.165,109.623,111.556)
C4: (63.509,105.873,106.209)
N3: (62.189,105.497,106.310)
OP1: (67.305,98.881,103.714)
OP2: (67.728,101.377,104.161)
C2: (61.666,104.244,106.107)
C1': (62.082,101.905,105.545)
C3': (62.695,100.664,103.615)
O5': (65.467,100.387,104.496)
O4': (63.084,100.962,105.885)
C5': (64.519,99.352,104.818)
P: (67.033,100.110,104.505)
C4': (63.128,99.930,104.872)
C2': (61.589,101.583,104.130)
O2': (60.328,100.951,104.229)
N1: (62.591,103.269,105.770)
O4: (63.818,107.050,106.397)
O2: (60.472,104.018,106.217)
C6: (63.927,103.578,105.654)
C5: (64.404,104.812,105.856)
O3': (62.211,99.723,102.663)
N3: (62.189,105.497,106.310)
OP1: (67.305,98.881,103.714)
OP2: (67.728,101.377,104.161)
C2: (61.666,104.244,106.107)
C1': (62.082,101.905,105.545)
C3': (62.695,100.664,103.615)
O5': (65.467,100.387,104.496)
O4': (63.084,100.962,105.885)
C5': (64.519,99.352,104.818)
P: (67.033,100.110,104.505)
C4': (63.128,99.930,104.872)
C2': (61.589,101.583,104.130)
O2': (60.328,100.951,104.229)
N1: (62.591,103.269,105.770)
O4: (63.818,107.050,106.397)
O2: (60.472,104.018,106.217)
C6: (63.927,103.578,105.654)
C5: (64.404,104.812,105.856)
O3': (62.211,99.723,102.663)
Image (generated by PyMOL):