ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCE:0340:0287

Extra

PDB:
ATOM 1 O3' A A 339 36.886 134.895 9.271 1.00 62.35 O
ATOM 2 P A A 340 38.375 134.294 9.289 1.00 61.20 P
ATOM 3 OP1 A A 340 39.045 134.782 8.059 1.00 62.13 O
ATOM 4 OP2 A A 340 38.323 132.837 9.564 1.00 60.24 O
ATOM 5 O5' A A 340 39.057 135.031 10.522 1.00 60.31 O
ATOM 6 C5' A A 340 39.323 136.440 10.469 1.00 60.16 C
ATOM 7 C4' A A 340 40.067 136.870 11.703 1.00 60.44 C
ATOM 8 O4' A A 340 39.212 136.671 12.854 1.00 61.15 O
ATOM 9 C3' A A 340 41.317 136.066 12.018 1.00 60.81 C
ATOM 10 O3' A A 340 42.444 136.548 11.296 1.00 61.96 O
ATOM 11 C2' A A 340 41.454 136.279 13.516 1.00 61.17 C
ATOM 12 O2' A A 340 41.964 137.561 13.821 1.00 61.13 O
ATOM 13 C1' A A 340 39.988 136.220 13.951 1.00 61.43 C
ATOM 14 N9 A A 340 39.530 134.874 14.308 1.00 60.09 N
ATOM 15 C8 A A 340 38.889 133.963 13.506 1.00 57.84 C
ATOM 16 N7 A A 340 38.577 132.851 14.117 1.00 57.83 N
ATOM 17 C5 A A 340 39.048 133.037 15.411 1.00 58.52 C
ATOM 18 C6 A A 340 39.021 132.220 16.561 1.00 58.62 C
ATOM 19 N6 A A 340 38.454 131.011 16.602 1.00 58.34 N
ATOM 20 N1 A A 340 39.599 132.698 17.685 1.00 58.20 N
ATOM 21 C2 A A 340 40.146 133.916 17.654 1.00 58.32 C
ATOM 22 N3 A A 340 40.219 134.782 16.645 1.00 59.94 N
ATOM 23 C4 A A 340 39.647 134.274 15.538 1.00 59.11 C
ATOM 24 P G A 341 43.756 135.631 11.155 1.00 62.35 P
ATOM 25 OP1 G A 341 44.715 136.408 10.334 1.00 63.72 O
ATOM 26 OP2 G A 341 43.383 134.247 10.745 1.00 62.18 O
ATOM 27 O5' G A 341 44.340 135.568 12.629 1.00 62.19 O
TER

ATOM 1 O3' C B 286 41.426 126.774 25.909 1.00 58.72 O
ATOM 2 P U B 287 40.107 127.650 26.182 1.00 58.06 P
ATOM 3 OP1 U B 287 39.966 127.752 27.655 1.00 58.51 O
ATOM 4 OP2 U B 287 38.996 127.094 25.377 1.00 56.68 O
ATOM 5 O5' U B 287 40.475 129.094 25.614 1.00 59.15 O
ATOM 6 C5' U B 287 41.542 129.867 26.203 1.00 59.56 C
ATOM 7 C4' U B 287 41.796 131.130 25.411 1.00 59.09 C
ATOM 8 O4' U B 287 42.213 130.791 24.061 1.00 59.07 O
ATOM 9 C3' U B 287 40.607 132.048 25.191 1.00 58.90 C
ATOM 10 O3' U B 287 40.332 132.884 26.303 1.00 59.01 O
ATOM 11 C2' U B 287 41.065 132.870 24.001 1.00 59.22 C
ATOM 12 O2' U B 287 41.983 133.873 24.380 1.00 59.53 O
ATOM 13 C1' U B 287 41.778 131.805 23.165 1.00 59.97 C
ATOM 14 N1 U B 287 40.884 131.206 22.163 1.00 59.99 N
ATOM 15 C2 U B 287 40.505 131.994 21.091 1.00 60.33 C
ATOM 16 O2 U B 287 40.867 133.152 20.957 1.00 60.92 O
ATOM 17 N3 U B 287 39.682 131.379 20.181 1.00 60.94 N
ATOM 18 C4 U B 287 39.206 130.088 20.233 1.00 61.23 C
ATOM 19 O4 U B 287 38.515 129.660 19.309 1.00 60.79 O
ATOM 20 C5 U B 287 39.630 129.344 21.378 1.00 61.76 C
ATOM 21 C6 U B 287 40.436 129.914 22.280 1.00 60.65 C
ATOM 22 P U B 288 38.904 133.611 26.403 1.00 59.00 P
ATOM 23 OP1 U B 288 38.853 134.386 27.675 1.00 57.32 O
ATOM 24 OP2 U B 288 37.871 132.585 26.128 1.00 60.24 O
ATOM 25 O5' U B 288 38.887 134.605 25.154 1.00 59.85 O
TER

Atoms:
OP1: (39.045,134.782,8.059)
OP2: (38.323,132.837,9.564)
C3': (41.317,136.066,12.018)
C1': (39.988,136.220,13.951)
C5': (39.323,136.440,10.469)
O4': (39.212,136.671,12.854)
C8: (38.889,133.963,13.506)
O2': (41.964,137.561,13.821)
C6: (39.021,132.220,16.561)
C5: (39.048,133.037,15.411)
C4: (39.647,134.274,15.538)
P: (38.375,134.294,9.289)
C4': (40.067,136.870,11.703)
C2': (41.454,136.279,13.516)
C2: (40.146,133.916,17.654)
N1: (39.599,132.698,17.685)
N3: (40.219,134.782,16.645)
N6: (38.454,131.011,16.602)
N7: (38.577,132.851,14.117)
N9: (39.530,134.874,14.308)
O5': (39.057,135.031,10.522)
O3': (42.444,136.548,11.296)
C4: (39.206,130.088,20.233)
N3: (39.682,131.379,20.181)
OP1: (39.966,127.752,27.655)
OP2: (38.996,127.094,25.377)
C2: (40.505,131.994,21.091)
C1': (41.778,131.805,23.165)
C3': (40.607,132.048,25.191)
O5': (40.475,129.094,25.614)
O4': (42.213,130.791,24.061)
C5': (41.542,129.867,26.203)
P: (40.107,127.650,26.182)
C4': (41.796,131.130,25.411)
C2': (41.065,132.870,24.001)
O2': (41.983,133.873,24.380)
N1: (40.884,131.206,22.163)
O4: (38.515,129.660,19.309)
O2: (40.867,133.152,20.957)
C6: (40.436,129.914,22.280)
C5: (39.630,129.344,21.378)
O3': (40.332,132.884,26.303)
Image (generated by PyMOL):
PyMOL image
show in jmol