ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SLM:A15:A27

Extra

PDB:
ATOM 1 O3' U A 14 4.224 6.934 43.055 1.00 27.99 O
ATOM 2 P A A 15 2.687 7.218 42.684 1.00 30.80 P
ATOM 3 OP1 A A 15 1.945 7.312 43.961 1.00 33.71 O
ATOM 4 OP2 A A 15 2.266 6.201 41.697 1.00 26.50 O
ATOM 5 O5' A A 15 2.765 8.648 41.993 1.00 26.90 O
ATOM 6 C5' A A 15 3.147 9.788 42.744 1.00 27.43 C
ATOM 7 C4' A A 15 3.352 10.997 41.868 1.00 26.70 C
ATOM 8 O4' A A 15 4.338 10.716 40.847 1.00 26.51 O
ATOM 9 C3' A A 15 2.153 11.461 41.068 1.00 24.74 C
ATOM 10 O3' A A 15 1.202 12.154 41.845 1.00 24.25 O
ATOM 11 C2' A A 15 2.812 12.316 39.996 1.00 25.90 C
ATOM 12 O2' A A 15 3.227 13.562 40.540 1.00 29.91 O
ATOM 13 C1' A A 15 4.065 11.499 39.706 1.00 24.66 C
ATOM 14 N9 A A 15 3.901 10.611 38.549 1.00 22.24 N
ATOM 15 C8 A A 15 3.711 9.261 38.559 1.00 23.95 C
ATOM 16 N7 A A 15 3.648 8.762 37.345 1.00 28.02 N
ATOM 17 C5 A A 15 3.812 9.851 36.490 1.00 23.52 C
ATOM 18 C6 A A 15 3.834 9.986 35.083 1.00 24.66 C
ATOM 19 N6 A A 15 3.695 8.986 34.201 1.00 22.87 N
ATOM 20 N1 A A 15 4.026 11.222 34.582 1.00 26.68 N
ATOM 21 C2 A A 15 4.179 12.241 35.436 1.00 26.32 C
ATOM 22 N3 A A 15 4.168 12.229 36.763 1.00 25.66 N
ATOM 23 C4 A A 15 3.978 10.992 37.233 1.00 22.18 C
ATOM 24 P G A 16 -0.322 12.254 41.350 1.00 29.58 P
ATOM 25 OP1 G A 16 -1.084 12.920 42.428 1.00 28.54 O
ATOM 26 OP2 G A 16 -0.734 10.904 40.913 1.00 23.20 O
ATOM 27 O5' G A 16 -0.225 13.218 40.094 1.00 27.40 O
TER

ATOM 1 O3' C B 26 3.743 12.619 24.832 1.00 30.11 O
ATOM 2 P U B 27 5.300 12.382 25.164 1.00 37.95 P
ATOM 3 OP1 U B 27 6.077 12.960 24.046 1.00 35.77 O
ATOM 4 OP2 U B 27 5.475 10.939 25.481 1.00 38.46 O
ATOM 5 O5' U B 27 5.514 13.251 26.472 1.00 27.70 O
ATOM 6 C5' U B 27 5.354 14.656 26.435 1.00 29.91 C
ATOM 7 C4' U B 27 5.246 15.233 27.820 1.00 27.81 C
ATOM 8 O4' U B 27 4.157 14.602 28.535 1.00 25.71 O
ATOM 9 C3' U B 27 6.436 15.010 28.731 1.00 28.76 C
ATOM 10 O3' U B 27 7.517 15.882 28.440 1.00 25.89 O
ATOM 11 C2' U B 27 5.806 15.222 30.110 1.00 26.74 C
ATOM 12 O2' U B 27 5.564 16.604 30.349 1.00 26.37 O
ATOM 13 C1' U B 27 4.455 14.553 29.911 1.00 21.87 C
ATOM 14 N1 U B 27 4.441 13.146 30.347 1.00 21.04 N
ATOM 15 C2 U B 27 4.318 12.877 31.693 1.00 23.48 C
ATOM 16 O2 U B 27 4.254 13.760 32.527 1.00 28.85 O
ATOM 17 N3 U B 27 4.281 11.554 32.044 1.00 21.79 N
ATOM 18 C4 U B 27 4.337 10.482 31.181 1.00 23.94 C
ATOM 19 O4 U B 27 4.288 9.336 31.616 1.00 24.96 O
ATOM 20 C5 U B 27 4.451 10.834 29.806 1.00 25.48 C
ATOM 21 C6 U B 27 4.488 12.123 29.443 1.00 26.84 C
ATOM 22 P A B 28 9.028 15.474 28.803 1.00 32.61 P
ATOM 23 OP1 A B 28 9.899 16.522 28.236 1.00 23.84 O
ATOM 24 OP2 A B 28 9.238 14.063 28.368 1.00 25.59 O
ATOM 25 O5' A B 28 9.037 15.560 30.396 1.00 28.44 O
TER

Atoms:
OP1: (1.945,7.312,43.961)
OP2: (2.266,6.201,41.697)
C3': (2.153,11.461,41.068)
C1': (4.065,11.499,39.706)
C5': (3.147,9.788,42.744)
O4': (4.338,10.716,40.847)
C8: (3.711,9.261,38.559)
O2': (3.227,13.562,40.540)
C6: (3.834,9.986,35.083)
C5: (3.812,9.851,36.490)
C4: (3.978,10.992,37.233)
P: (2.687,7.218,42.684)
C4': (3.352,10.997,41.868)
C2': (2.812,12.316,39.996)
C2: (4.179,12.241,35.436)
N1: (4.026,11.222,34.582)
N3: (4.168,12.229,36.763)
N6: (3.695,8.986,34.201)
N7: (3.648,8.762,37.345)
N9: (3.901,10.611,38.549)
O5': (2.765,8.648,41.993)
O3': (1.202,12.154,41.845)
C4: (4.337,10.482,31.181)
N3: (4.281,11.554,32.044)
OP1: (6.077,12.960,24.046)
OP2: (5.475,10.939,25.481)
C2: (4.318,12.877,31.693)
C1': (4.455,14.553,29.911)
C3': (6.436,15.010,28.731)
O5': (5.514,13.251,26.472)
O4': (4.157,14.602,28.535)
C5': (5.354,14.656,26.435)
P: (5.300,12.382,25.164)
C4': (5.246,15.233,27.820)
C2': (5.806,15.222,30.110)
O2': (5.564,16.604,30.349)
N1: (4.441,13.146,30.347)
O4: (4.288,9.336,31.616)
O2: (4.254,13.760,32.527)
C6: (4.488,12.123,29.443)
C5: (4.451,10.834,29.806)
O3': (7.517,15.882,28.440)
Image (generated by PyMOL):
PyMOL image
show in jmol