ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HOM:A33:A11

Extra

PDB:
ATOM 1 O3' A A 32 6.573 39.955 63.570 1.00 95.19 O
ATOM 2 P A A 33 5.640 39.915 62.266 1.00 95.24 P
ATOM 3 OP1 A A 33 4.892 41.203 62.206 1.00 94.52 O
ATOM 4 OP2 A A 33 4.901 38.622 62.231 1.00 94.14 O
ATOM 5 O5' A A 33 6.687 39.920 61.072 1.00 96.33 O
ATOM 6 C5' A A 33 6.327 39.472 59.772 1.00 95.44 C
ATOM 7 C4' A A 33 7.379 39.896 58.785 1.00 94.56 C
ATOM 8 O4' A A 33 8.684 39.678 59.375 1.00 93.08 O
ATOM 9 C3' A A 33 7.398 39.111 57.490 1.00 95.93 C
ATOM 10 O3' A A 33 6.500 39.697 56.559 1.00101.18 O
ATOM 11 C2' A A 33 8.846 39.274 57.047 1.00 93.74 C
ATOM 12 O2' A A 33 9.064 40.545 56.463 1.00 93.75 O
ATOM 13 C1' A A 33 9.580 39.210 58.388 1.00 90.75 C
ATOM 14 N9 A A 33 10.044 37.880 58.789 1.00 84.05 N
ATOM 15 C8 A A 33 9.615 36.645 58.374 1.00 81.02 C
ATOM 16 N7 A A 33 10.263 35.647 58.929 1.00 76.79 N
ATOM 17 C5 A A 33 11.176 36.268 59.764 1.00 77.26 C
ATOM 18 C6 A A 33 12.161 35.767 60.623 1.00 76.43 C
ATOM 19 N6 A A 33 12.407 34.470 60.789 1.00 77.92 N
ATOM 20 N1 A A 33 12.900 36.657 61.318 1.00 76.04 N
ATOM 21 C2 A A 33 12.659 37.962 61.149 1.00 76.16 C
ATOM 22 N3 A A 33 11.765 38.556 60.367 1.00 77.03 N
ATOM 23 C4 A A 33 11.049 37.642 59.692 1.00 79.52 C
ATOM 24 P U A 34 5.536 38.757 55.671 1.00103.94 P
ATOM 25 OP1 U A 34 5.102 39.580 54.507 1.00102.98 O
ATOM 26 OP2 U A 34 4.516 38.157 56.585 1.00102.35 O
ATOM 27 O5' U A 34 6.481 37.597 55.113 1.00103.26 O
TER

ATOM 1 O3' G B 10 19.924 34.496 67.397 1.00 67.34 O
ATOM 2 P U B 11 18.791 34.106 68.474 1.00 69.72 P
ATOM 3 OP1 U B 11 19.428 34.240 69.815 1.00 67.94 O
ATOM 4 OP2 U B 11 18.187 32.810 68.067 1.00 70.75 O
ATOM 5 O5' U B 11 17.683 35.246 68.307 1.00 67.65 O
ATOM 6 C5' U B 11 18.093 36.593 68.325 1.00 64.78 C
ATOM 7 C4' U B 11 16.943 37.551 68.143 1.00 64.09 C
ATOM 8 O4' U B 11 16.536 37.558 66.739 1.00 64.68 O
ATOM 9 C3' U B 11 15.688 37.146 68.888 1.00 63.48 C
ATOM 10 O3' U B 11 15.246 37.686 70.094 1.00 67.10 O
ATOM 11 C2' U B 11 14.684 36.585 67.920 1.00 64.08 C
ATOM 12 O2' U B 11 13.488 37.305 68.143 1.00 63.57 O
ATOM 13 C1' U B 11 15.207 37.089 66.591 1.00 63.02 C
ATOM 14 N1 U B 11 15.102 36.075 65.536 1.00 61.23 N
ATOM 15 C2 U B 11 14.588 36.494 64.331 1.00 62.06 C
ATOM 16 O2 U B 11 14.302 37.658 64.111 1.00 64.97 O
ATOM 17 N3 U B 11 14.411 35.508 63.394 1.00 60.85 N
ATOM 18 C4 U B 11 14.693 34.182 63.536 1.00 58.57 C
ATOM 19 O4 U B 11 14.457 33.425 62.604 1.00 61.36 O
ATOM 20 C5 U B 11 15.247 33.818 64.806 1.00 58.86 C
ATOM 21 C6 U B 11 15.438 34.759 65.739 1.00 59.39 C
ATOM 22 P G B 12 14.676 36.693 71.211 1.00 65.86 P
ATOM 23 OP1 G B 12 14.699 35.310 70.679 1.00 67.18 O
ATOM 24 OP2 G B 12 13.387 37.279 71.672 1.00 66.82 O
ATOM 25 O5' G B 12 15.793 36.787 72.335 1.00 65.62 O
TER

Atoms:
OP1: (4.892,41.203,62.206)
OP2: (4.901,38.622,62.231)
C3': (7.398,39.111,57.490)
C1': (9.580,39.210,58.388)
C5': (6.327,39.472,59.772)
O4': (8.684,39.678,59.375)
C8: (9.615,36.645,58.374)
O2': (9.064,40.545,56.463)
C6: (12.161,35.767,60.623)
C5: (11.176,36.268,59.764)
C4: (11.049,37.642,59.692)
P: (5.640,39.915,62.266)
C4': (7.379,39.896,58.785)
C2': (8.846,39.274,57.047)
C2: (12.659,37.962,61.149)
N1: (12.900,36.657,61.318)
N3: (11.765,38.556,60.367)
N6: (12.407,34.470,60.789)
N7: (10.263,35.647,58.929)
N9: (10.044,37.880,58.789)
O5': (6.687,39.920,61.072)
O3': (6.500,39.697,56.559)
C4: (14.693,34.182,63.536)
N3: (14.411,35.508,63.394)
OP1: (19.428,34.240,69.815)
OP2: (18.187,32.810,68.067)
C2: (14.588,36.494,64.331)
C1': (15.207,37.089,66.591)
C3': (15.688,37.146,68.888)
O5': (17.683,35.246,68.307)
O4': (16.536,37.558,66.739)
C5': (18.093,36.593,68.325)
P: (18.791,34.106,68.474)
C4': (16.943,37.551,68.143)
C2': (14.684,36.585,67.920)
O2': (13.488,37.305,68.143)
N1: (15.102,36.075,65.536)
O4: (14.457,33.425,62.604)
O2: (14.302,37.658,64.111)
C6: (15.438,34.759,65.739)
C5: (15.247,33.818,64.806)
O3': (15.246,37.686,70.094)
Image (generated by PyMOL):
PyMOL image
show in jmol