Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11418:11402
Extra
PDB:
ATOM 1 O3' G A1417 42.539 65.365 103.843 1.00 61.17 O
ATOM 2 P A A1418 41.012 64.942 103.543 1.00 62.77 P
ATOM 3 OP1 A A1418 40.164 65.823 104.397 1.00 63.43 O
ATOM 4 OP2 A A1418 40.900 63.455 103.718 1.00 62.12 O
ATOM 5 O5' A A1418 40.837 65.353 102.005 1.00 62.57 O
ATOM 6 C5' A A1418 40.785 66.723 101.660 1.00 63.14 C
ATOM 7 C4' A A1418 40.828 66.952 100.178 1.00 62.89 C
ATOM 8 O4' A A1418 41.960 66.268 99.579 1.00 62.40 O
ATOM 9 C3' A A1418 39.659 66.437 99.381 1.00 62.46 C
ATOM 10 O3' A A1418 38.478 67.193 99.550 1.00 62.89 O
ATOM 11 C2' A A1418 40.226 66.456 97.972 1.00 62.13 C
ATOM 12 O2' A A1418 40.341 67.777 97.500 1.00 62.67 O
ATOM 13 C1' A A1418 41.633 65.922 98.239 1.00 61.92 C
ATOM 14 N9 A A1418 41.662 64.459 98.111 1.00 61.19 N
ATOM 15 C8 A A1418 41.707 63.508 99.107 1.00 60.98 C
ATOM 16 N7 A A1418 41.667 62.266 98.659 1.00 60.30 N
ATOM 17 C5 A A1418 41.564 62.403 97.285 1.00 60.05 C
ATOM 18 C6 A A1418 41.481 61.438 96.257 1.00 59.39 C
ATOM 19 N6 A A1418 41.496 60.112 96.423 1.00 58.83 N
ATOM 20 N1 A A1418 41.389 61.929 95.008 1.00 59.34 N
ATOM 21 C2 A A1418 41.386 63.279 94.848 1.00 59.93 C
ATOM 22 N3 A A1418 41.464 64.290 95.721 1.00 60.58 N
ATOM 23 C4 A A1418 41.552 63.760 96.938 1.00 60.60 C
ATOM 24 P A A1419 37.069 66.416 99.728 1.00 65.47 P
ATOM 25 OP1 A A1419 36.067 67.406 100.167 1.00 66.09 O
ATOM 26 OP2 A A1419 37.308 65.228 100.585 1.00 65.10 O
ATOM 27 O5' A A1419 36.749 65.934 98.244 1.00 64.90 O
TER
ATOM 1 O3' U B1401 40.718 55.534 87.102 1.00 55.58 O
ATOM 2 P U B1402 42.229 56.055 87.368 1.00 48.66 P
ATOM 3 OP1 U B1402 42.952 55.920 86.076 1.00 48.40 O
ATOM 4 OP2 U B1402 42.748 55.362 88.572 1.00 48.57 O
ATOM 5 O5' U B1402 42.016 57.579 87.701 1.00 49.36 O
ATOM 6 C5' U B1402 41.304 58.418 86.819 1.00 49.58 C
ATOM 7 C4' U B1402 41.160 59.780 87.409 1.00 50.27 C
ATOM 8 O4' U B1402 40.258 59.727 88.540 1.00 50.45 O
ATOM 9 C3' U B1402 42.412 60.381 88.009 1.00 50.62 C
ATOM 10 O3' U B1402 43.324 60.868 87.041 1.00 50.67 O
ATOM 11 C2' U B1402 41.832 61.448 88.927 1.00 51.25 C
ATOM 12 O2' U B1402 41.353 62.557 88.183 1.00 51.63 O
ATOM 13 C1' U B1402 40.623 60.714 89.475 1.00 51.04 C
ATOM 14 N1 U B1402 40.886 60.061 90.730 1.00 50.97 N
ATOM 15 C2 U B1402 40.997 60.870 91.834 1.00 51.53 C
ATOM 16 O2 U B1402 40.949 62.095 91.782 1.00 52.07 O
ATOM 17 N3 U B1402 41.170 60.183 93.004 1.00 51.45 N
ATOM 18 C4 U B1402 41.210 58.814 93.123 1.00 50.87 C
ATOM 19 O4 U B1402 41.372 58.339 94.243 1.00 50.89 O
ATOM 20 C5 U B1402 41.049 58.066 91.913 1.00 50.32 C
ATOM 21 C6 U B1402 40.885 58.705 90.769 1.00 50.38 C
ATOM 22 P C B1403 44.872 61.078 87.429 1.00 52.19 P
ATOM 23 OP1 C B1403 45.604 61.335 86.169 1.00 52.10 O
ATOM 24 OP2 C B1403 45.292 59.914 88.269 1.00 51.82 O
ATOM 25 O5' C B1403 44.817 62.417 88.320 1.00 52.94 O
TER
ATOM 2 P A A1418 41.012 64.942 103.543 1.00 62.77 P
ATOM 3 OP1 A A1418 40.164 65.823 104.397 1.00 63.43 O
ATOM 4 OP2 A A1418 40.900 63.455 103.718 1.00 62.12 O
ATOM 5 O5' A A1418 40.837 65.353 102.005 1.00 62.57 O
ATOM 6 C5' A A1418 40.785 66.723 101.660 1.00 63.14 C
ATOM 7 C4' A A1418 40.828 66.952 100.178 1.00 62.89 C
ATOM 8 O4' A A1418 41.960 66.268 99.579 1.00 62.40 O
ATOM 9 C3' A A1418 39.659 66.437 99.381 1.00 62.46 C
ATOM 10 O3' A A1418 38.478 67.193 99.550 1.00 62.89 O
ATOM 11 C2' A A1418 40.226 66.456 97.972 1.00 62.13 C
ATOM 12 O2' A A1418 40.341 67.777 97.500 1.00 62.67 O
ATOM 13 C1' A A1418 41.633 65.922 98.239 1.00 61.92 C
ATOM 14 N9 A A1418 41.662 64.459 98.111 1.00 61.19 N
ATOM 15 C8 A A1418 41.707 63.508 99.107 1.00 60.98 C
ATOM 16 N7 A A1418 41.667 62.266 98.659 1.00 60.30 N
ATOM 17 C5 A A1418 41.564 62.403 97.285 1.00 60.05 C
ATOM 18 C6 A A1418 41.481 61.438 96.257 1.00 59.39 C
ATOM 19 N6 A A1418 41.496 60.112 96.423 1.00 58.83 N
ATOM 20 N1 A A1418 41.389 61.929 95.008 1.00 59.34 N
ATOM 21 C2 A A1418 41.386 63.279 94.848 1.00 59.93 C
ATOM 22 N3 A A1418 41.464 64.290 95.721 1.00 60.58 N
ATOM 23 C4 A A1418 41.552 63.760 96.938 1.00 60.60 C
ATOM 24 P A A1419 37.069 66.416 99.728 1.00 65.47 P
ATOM 25 OP1 A A1419 36.067 67.406 100.167 1.00 66.09 O
ATOM 26 OP2 A A1419 37.308 65.228 100.585 1.00 65.10 O
ATOM 27 O5' A A1419 36.749 65.934 98.244 1.00 64.90 O
TER
ATOM 1 O3' U B1401 40.718 55.534 87.102 1.00 55.58 O
ATOM 2 P U B1402 42.229 56.055 87.368 1.00 48.66 P
ATOM 3 OP1 U B1402 42.952 55.920 86.076 1.00 48.40 O
ATOM 4 OP2 U B1402 42.748 55.362 88.572 1.00 48.57 O
ATOM 5 O5' U B1402 42.016 57.579 87.701 1.00 49.36 O
ATOM 6 C5' U B1402 41.304 58.418 86.819 1.00 49.58 C
ATOM 7 C4' U B1402 41.160 59.780 87.409 1.00 50.27 C
ATOM 8 O4' U B1402 40.258 59.727 88.540 1.00 50.45 O
ATOM 9 C3' U B1402 42.412 60.381 88.009 1.00 50.62 C
ATOM 10 O3' U B1402 43.324 60.868 87.041 1.00 50.67 O
ATOM 11 C2' U B1402 41.832 61.448 88.927 1.00 51.25 C
ATOM 12 O2' U B1402 41.353 62.557 88.183 1.00 51.63 O
ATOM 13 C1' U B1402 40.623 60.714 89.475 1.00 51.04 C
ATOM 14 N1 U B1402 40.886 60.061 90.730 1.00 50.97 N
ATOM 15 C2 U B1402 40.997 60.870 91.834 1.00 51.53 C
ATOM 16 O2 U B1402 40.949 62.095 91.782 1.00 52.07 O
ATOM 17 N3 U B1402 41.170 60.183 93.004 1.00 51.45 N
ATOM 18 C4 U B1402 41.210 58.814 93.123 1.00 50.87 C
ATOM 19 O4 U B1402 41.372 58.339 94.243 1.00 50.89 O
ATOM 20 C5 U B1402 41.049 58.066 91.913 1.00 50.32 C
ATOM 21 C6 U B1402 40.885 58.705 90.769 1.00 50.38 C
ATOM 22 P C B1403 44.872 61.078 87.429 1.00 52.19 P
ATOM 23 OP1 C B1403 45.604 61.335 86.169 1.00 52.10 O
ATOM 24 OP2 C B1403 45.292 59.914 88.269 1.00 51.82 O
ATOM 25 O5' C B1403 44.817 62.417 88.320 1.00 52.94 O
TER
Atoms:
OP1: (40.164,65.823,104.397)
OP2: (40.900,63.455,103.718)
C3': (39.659,66.437,99.381)
C1': (41.633,65.922,98.239)
C5': (40.785,66.723,101.660)
O4': (41.960,66.268,99.579)
C8: (41.707,63.508,99.107)
O2': (40.341,67.777,97.500)
C6: (41.481,61.438,96.257)
C5: (41.564,62.403,97.285)
C4: (41.552,63.760,96.938)
P: (41.012,64.942,103.543)
C4': (40.828,66.952,100.178)
C2': (40.226,66.456,97.972)
C2: (41.386,63.279,94.848)
N1: (41.389,61.929,95.008)
N3: (41.464,64.290,95.721)
N6: (41.496,60.112,96.423)
N7: (41.667,62.266,98.659)
N9: (41.662,64.459,98.111)
O5': (40.837,65.353,102.005)
O3': (38.478,67.193,99.550)
OP2: (40.900,63.455,103.718)
C3': (39.659,66.437,99.381)
C1': (41.633,65.922,98.239)
C5': (40.785,66.723,101.660)
O4': (41.960,66.268,99.579)
C8: (41.707,63.508,99.107)
O2': (40.341,67.777,97.500)
C6: (41.481,61.438,96.257)
C5: (41.564,62.403,97.285)
C4: (41.552,63.760,96.938)
P: (41.012,64.942,103.543)
C4': (40.828,66.952,100.178)
C2': (40.226,66.456,97.972)
C2: (41.386,63.279,94.848)
N1: (41.389,61.929,95.008)
N3: (41.464,64.290,95.721)
N6: (41.496,60.112,96.423)
N7: (41.667,62.266,98.659)
N9: (41.662,64.459,98.111)
O5': (40.837,65.353,102.005)
O3': (38.478,67.193,99.550)
C4: (41.210,58.814,93.123)
N3: (41.170,60.183,93.004)
OP1: (42.952,55.920,86.076)
OP2: (42.748,55.362,88.572)
C2: (40.997,60.870,91.834)
C1': (40.623,60.714,89.475)
C3': (42.412,60.381,88.009)
O5': (42.016,57.579,87.701)
O4': (40.258,59.727,88.540)
C5': (41.304,58.418,86.819)
P: (42.229,56.055,87.368)
C4': (41.160,59.780,87.409)
C2': (41.832,61.448,88.927)
O2': (41.353,62.557,88.183)
N1: (40.886,60.061,90.730)
O4: (41.372,58.339,94.243)
O2: (40.949,62.095,91.782)
C6: (40.885,58.705,90.769)
C5: (41.049,58.066,91.913)
O3': (43.324,60.868,87.041)
N3: (41.170,60.183,93.004)
OP1: (42.952,55.920,86.076)
OP2: (42.748,55.362,88.572)
C2: (40.997,60.870,91.834)
C1': (40.623,60.714,89.475)
C3': (42.412,60.381,88.009)
O5': (42.016,57.579,87.701)
O4': (40.258,59.727,88.540)
C5': (41.304,58.418,86.819)
P: (42.229,56.055,87.368)
C4': (41.160,59.780,87.409)
C2': (41.832,61.448,88.927)
O2': (41.353,62.557,88.183)
N1: (40.886,60.061,90.730)
O4: (41.372,58.339,94.243)
O2: (40.949,62.095,91.782)
C6: (40.885,58.705,90.769)
C5: (41.049,58.066,91.913)
O3': (43.324,60.868,87.041)
Image (generated by PyMOL):