ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01201:01081

Extra

PDB:
ATOM 1 O3' G A1200 28.459 119.022 128.550 1.00 42.43 O
ATOM 2 P A A1201 29.357 118.984 129.886 1.00 43.93 P
ATOM 3 OP1 A A1201 29.056 120.232 130.622 1.00 45.40 O
ATOM 4 OP2 A A1201 30.750 118.685 129.506 1.00 45.00 O
ATOM 5 O5' A A1201 28.848 117.725 130.730 1.00 44.72 O
ATOM 6 C5' A A1201 27.515 117.661 131.262 1.00 41.49 C
ATOM 7 C4' A A1201 26.911 116.302 130.986 1.00 41.92 C
ATOM 8 O4' A A1201 27.501 115.784 129.761 1.00 43.46 O
ATOM 9 C3' A A1201 27.163 115.188 131.994 1.00 41.46 C
ATOM 10 O3' A A1201 26.232 115.235 133.069 1.00 42.63 O
ATOM 11 C2' A A1201 26.925 113.950 131.144 1.00 42.56 C
ATOM 12 O2' A A1201 25.554 113.732 130.889 1.00 43.09 O
ATOM 13 C1' A A1201 27.581 114.366 129.829 1.00 42.95 C
ATOM 14 N9 A A1201 28.989 113.961 129.745 1.00 41.91 N
ATOM 15 C8 A A1201 30.122 114.740 129.837 1.00 40.93 C
ATOM 16 N7 A A1201 31.240 114.063 129.706 1.00 40.80 N
ATOM 17 C5 A A1201 30.817 112.753 129.518 1.00 40.34 C
ATOM 18 C6 A A1201 31.520 111.546 129.317 1.00 40.28 C
ATOM 19 N6 A A1201 32.850 111.458 129.252 1.00 37.18 N
ATOM 20 N1 A A1201 30.794 110.415 129.178 1.00 40.51 N
ATOM 21 C2 A A1201 29.456 110.500 129.229 1.00 40.65 C
ATOM 22 N3 A A1201 28.685 111.570 129.403 1.00 40.95 N
ATOM 23 C4 A A1201 29.435 112.676 129.546 1.00 40.35 C
ATOM 24 P C A1202 26.598 114.571 134.492 1.00 41.94 P
ATOM 25 OP1 C A1202 25.589 115.067 135.450 1.00 42.20 O
ATOM 26 OP2 C A1202 28.034 114.792 134.775 1.00 41.01 O
ATOM 27 O5' C A1202 26.335 113.014 134.279 1.00 40.73 O
TER

ATOM 1 O3' G B1080 35.908 101.064 128.354 1.00 40.85 O
ATOM 2 P U B1081 35.796 101.738 126.898 1.00 41.32 P
ATOM 3 OP1 U B1081 35.753 100.636 125.901 1.00 42.68 O
ATOM 4 OP2 U B1081 36.822 102.794 126.780 1.00 38.67 O
ATOM 5 O5' U B1081 34.369 102.437 126.904 1.00 41.41 O
ATOM 6 C5' U B1081 33.174 101.647 126.835 1.00 39.24 C
ATOM 7 C4' U B1081 31.964 102.538 126.776 1.00 40.69 C
ATOM 8 O4' U B1081 31.889 103.335 127.988 1.00 41.40 O
ATOM 9 C3' U B1081 31.949 103.598 125.691 1.00 41.54 C
ATOM 10 O3' U B1081 31.615 103.082 124.408 1.00 43.75 O
ATOM 11 C2' U B1081 30.880 104.540 126.217 1.00 40.85 C
ATOM 12 O2' U B1081 29.572 104.031 126.032 1.00 43.33 O
ATOM 13 C1' U B1081 31.211 104.547 127.710 1.00 39.63 C
ATOM 14 N1 U B1081 32.073 105.686 128.061 1.00 39.60 N
ATOM 15 C2 U B1081 31.445 106.887 128.353 1.00 39.45 C
ATOM 16 O2 U B1081 30.240 107.008 128.385 1.00 41.89 O
ATOM 17 N3 U B1081 32.284 107.941 128.601 1.00 38.36 N
ATOM 18 C4 U B1081 33.655 107.924 128.593 1.00 37.64 C
ATOM 19 O4 U B1081 34.266 108.973 128.776 1.00 38.40 O
ATOM 20 C5 U B1081 34.236 106.646 128.316 1.00 38.28 C
ATOM 21 C6 U B1081 33.445 105.593 128.071 1.00 39.17 C
ATOM 22 P A B1082 32.222 103.778 123.091 1.00 45.44 P
ATOM 23 OP1 A B1082 32.089 105.259 123.217 1.00 42.32 O
ATOM 24 OP2 A B1082 31.637 103.072 121.916 1.00 43.16 O
ATOM 25 O5' A B1082 33.776 103.442 123.146 1.00 45.29 O
TER

Atoms:
OP1: (29.056,120.232,130.622)
OP2: (30.750,118.685,129.506)
C3': (27.163,115.188,131.994)
C1': (27.581,114.366,129.829)
C5': (27.515,117.661,131.262)
O4': (27.501,115.784,129.761)
C8: (30.122,114.740,129.837)
O2': (25.554,113.732,130.889)
C6: (31.520,111.546,129.317)
C5: (30.817,112.753,129.518)
C4: (29.435,112.676,129.546)
P: (29.357,118.984,129.886)
C4': (26.911,116.302,130.986)
C2': (26.925,113.950,131.144)
C2: (29.456,110.500,129.229)
N1: (30.794,110.415,129.178)
N3: (28.685,111.570,129.403)
N6: (32.850,111.458,129.252)
N7: (31.240,114.063,129.706)
N9: (28.989,113.961,129.745)
O5': (28.848,117.725,130.730)
O3': (26.232,115.235,133.069)
C4: (33.655,107.924,128.593)
N3: (32.284,107.941,128.601)
OP1: (35.753,100.636,125.901)
OP2: (36.822,102.794,126.780)
C2: (31.445,106.887,128.353)
C1': (31.211,104.547,127.710)
C3': (31.949,103.598,125.691)
O5': (34.369,102.437,126.904)
O4': (31.889,103.335,127.988)
C5': (33.174,101.647,126.835)
P: (35.796,101.738,126.898)
C4': (31.964,102.538,126.776)
C2': (30.880,104.540,126.217)
O2': (29.572,104.031,126.032)
N1: (32.073,105.686,128.061)
O4: (34.266,108.973,128.776)
O2: (30.240,107.008,128.385)
C6: (33.445,105.593,128.071)
C5: (34.236,106.646,128.316)
O3': (31.615,103.082,124.408)
Image (generated by PyMOL):
PyMOL image
show in jmol