ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GID:A89:A28

Extra

PDB:
ATOM 1 O3' G A 88 13.040 65.878 61.352 1.00 64.50 O
ATOM 2 P A A 89 12.899 65.160 59.916 1.00 64.80 P
ATOM 3 OP1 A A 89 11.721 65.720 59.202 1.00 65.27 O
ATOM 4 OP2 A A 89 12.984 63.678 60.148 1.00 63.48 O
ATOM 5 O5' A A 89 14.194 65.681 59.157 1.00 63.47 O
ATOM 6 C5' A A 89 14.289 65.637 57.750 1.00 64.49 C
ATOM 7 C4' A A 89 14.497 67.020 57.200 1.00 66.70 C
ATOM 8 O4' A A 89 15.281 67.839 58.119 1.00 70.11 O
ATOM 9 C3' A A 89 15.270 67.022 55.894 1.00 69.53 C
ATOM 10 O3' A A 89 14.352 66.914 54.821 1.00 68.99 O
ATOM 11 C2' A A 89 16.030 68.347 55.981 1.00 72.38 C
ATOM 12 O2' A A 89 15.228 69.496 55.724 1.00 72.21 O
ATOM 13 C1' A A 89 16.447 68.314 57.452 1.00 72.42 C
ATOM 14 N9 A A 89 17.511 67.334 57.663 1.00 74.92 N
ATOM 15 C8 A A 89 17.423 66.143 58.343 1.00 78.15 C
ATOM 16 N7 A A 89 18.536 65.450 58.346 1.00 79.90 N
ATOM 17 C5 A A 89 19.415 66.238 57.624 1.00 78.44 C
ATOM 18 C6 A A 89 20.754 66.057 57.266 1.00 79.01 C
ATOM 19 N6 A A 89 21.465 64.979 57.593 1.00 80.33 N
ATOM 20 N1 A A 89 21.351 67.031 56.547 1.00 80.19 N
ATOM 21 C2 A A 89 20.628 68.112 56.212 1.00 80.82 C
ATOM 22 N3 A A 89 19.352 68.395 56.490 1.00 79.15 N
ATOM 23 C4 A A 89 18.798 67.405 57.204 1.00 76.77 C
ATOM 24 P C A 90 13.949 65.454 54.280 1.00 70.52 P
ATOM 25 OP1 C A 90 12.645 65.556 53.569 1.00 70.83 O
ATOM 26 OP2 C A 90 14.087 64.514 55.428 1.00 72.23 O
ATOM 27 O5' C A 90 15.080 65.127 53.209 1.00 69.41 O
TER

ATOM 1 O3' U B 27 32.136 66.917 54.814 0.00 83.82 O
ATOM 2 P U B 28 30.824 67.699 55.313 1.00 89.31 P
ATOM 3 OP1 U B 28 31.021 69.175 55.139 1.00 88.63 O
ATOM 4 OP2 U B 28 30.491 67.155 56.673 1.00 90.05 O
ATOM 5 O5' U B 28 29.697 67.230 54.274 1.00 91.17 O
ATOM 6 C5' U B 28 29.628 67.775 52.947 1.00 91.10 C
ATOM 7 C4' U B 28 28.307 68.493 52.745 1.00 89.75 C
ATOM 8 O4' U B 28 27.192 67.547 52.618 1.00 89.62 O
ATOM 9 C3' U B 28 27.891 69.337 53.928 1.00 87.73 C
ATOM 10 O3' U B 28 28.573 70.552 54.027 1.00 86.97 O
ATOM 11 C2' U B 28 26.401 69.511 53.698 1.00 86.68 C
ATOM 12 O2' U B 28 26.096 70.469 52.704 1.00 83.89 O
ATOM 13 C1' U B 28 26.021 68.098 53.242 1.00 88.06 C
ATOM 14 N1 U B 28 25.686 67.291 54.435 1.00 85.40 N
ATOM 15 C2 U B 28 24.358 67.259 54.858 1.00 83.38 C
ATOM 16 O2 U B 28 23.450 67.839 54.278 1.00 82.94 O
ATOM 17 N3 U B 28 24.132 66.520 55.993 1.00 82.16 N
ATOM 18 C4 U B 28 25.069 65.815 56.732 1.00 82.42 C
ATOM 19 O4 U B 28 24.713 65.188 57.730 1.00 81.52 O
ATOM 20 C5 U B 28 26.406 65.894 56.231 1.00 83.92 C
ATOM 21 C6 U B 28 26.664 66.609 55.129 1.00 84.73 C
ATOM 22 P C B 29 28.593 71.282 55.449 1.00 89.01 P
ATOM 23 OP1 C B 29 29.563 72.414 55.374 1.00 90.81 O
ATOM 24 OP2 C B 29 28.779 70.223 56.500 1.00 90.09 O
ATOM 25 O5' C B 29 27.106 71.860 55.568 1.00 85.70 O
TER

Atoms:
OP1: (11.721,65.720,59.202)
OP2: (12.984,63.678,60.148)
C3': (15.270,67.022,55.894)
C1': (16.447,68.314,57.452)
C5': (14.289,65.637,57.750)
O4': (15.281,67.839,58.119)
C8: (17.423,66.143,58.343)
O2': (15.228,69.496,55.724)
C6: (20.754,66.057,57.266)
C5: (19.415,66.238,57.624)
C4: (18.798,67.405,57.204)
P: (12.899,65.160,59.916)
C4': (14.497,67.020,57.200)
C2': (16.030,68.347,55.981)
C2: (20.628,68.112,56.212)
N1: (21.351,67.031,56.547)
N3: (19.352,68.395,56.490)
N6: (21.465,64.979,57.593)
N7: (18.536,65.450,58.346)
N9: (17.511,67.334,57.663)
O5': (14.194,65.681,59.157)
O3': (14.352,66.914,54.821)
C4: (25.069,65.815,56.732)
N3: (24.132,66.520,55.993)
OP1: (31.021,69.175,55.139)
OP2: (30.491,67.155,56.673)
C2: (24.358,67.259,54.858)
C1': (26.021,68.098,53.242)
C3': (27.891,69.337,53.928)
O5': (29.697,67.230,54.274)
O4': (27.192,67.547,52.618)
C5': (29.628,67.775,52.947)
P: (30.824,67.699,55.313)
C4': (28.307,68.493,52.745)
C2': (26.401,69.511,53.698)
O2': (26.096,70.469,52.704)
N1: (25.686,67.291,54.435)
O4: (24.713,65.188,57.730)
O2: (23.450,67.839,54.278)
C6: (26.664,66.609,55.129)
C5: (26.406,65.894,56.231)
O3': (28.573,70.552,54.027)
Image (generated by PyMOL):
PyMOL image
show in jmol