Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYK:F4:E7
Extra
PDB:
ATOM 1 O3' G A 3 45.629 18.217 45.372 1.00 78.22 O
ATOM 2 P A A 4 46.113 19.527 46.174 1.00 72.81 P
ATOM 3 OP1 A A 4 45.148 20.615 45.878 1.00 67.90 O
ATOM 4 OP2 A A 4 47.559 19.731 45.884 1.00 50.14 O
ATOM 5 O5' A A 4 45.936 19.116 47.704 1.00 59.45 O
ATOM 6 C5' A A 4 44.637 18.878 48.235 1.00 61.16 C
ATOM 7 C4' A A 4 44.718 18.549 49.704 1.00 66.90 C
ATOM 8 O4' A A 4 45.387 17.275 49.889 1.00 69.91 O
ATOM 9 C3' A A 4 45.540 19.504 50.548 1.00 68.39 C
ATOM 10 O3' A A 4 44.799 20.664 50.889 1.00 72.82 O
ATOM 11 C2' A A 4 45.846 18.650 51.768 1.00 63.71 C
ATOM 12 O2' A A 4 44.749 18.564 52.655 1.00 60.73 O
ATOM 13 C1' A A 4 46.103 17.291 51.115 1.00 61.99 C
ATOM 14 N9 A A 4 47.519 17.078 50.821 1.00 56.60 N
ATOM 15 C8 A A 4 48.172 17.187 49.616 1.00 54.69 C
ATOM 16 N7 A A 4 49.458 16.933 49.688 1.00 51.85 N
ATOM 17 C5 A A 4 49.663 16.632 51.028 1.00 51.00 C
ATOM 18 C6 A A 4 50.812 16.275 51.754 1.00 47.84 C
ATOM 19 N6 A A 4 52.021 16.141 51.208 1.00 54.19 N
ATOM 20 N1 A A 4 50.676 16.058 53.081 1.00 46.97 N
ATOM 21 C2 A A 4 49.463 16.186 53.631 1.00 45.39 C
ATOM 22 N3 A A 4 48.307 16.508 53.054 1.00 52.56 N
ATOM 23 C4 A A 4 48.478 16.721 51.737 1.00 54.73 C
ATOM 24 P A A 5 45.564 22.061 51.080 1.00 66.57 P
ATOM 25 OP1 A A 5 44.532 23.092 51.352 1.00 77.69 O
ATOM 26 OP2 A A 5 46.500 22.235 49.939 1.00 65.30 O
ATOM 27 O5' A A 5 46.415 21.847 52.408 1.00 59.16 O
TER
ATOM 1 O3' U B 6 59.158 13.187 57.607 1.00 42.03 O
ATOM 2 P U B 7 58.452 11.784 57.264 1.00 48.49 P
ATOM 3 OP1 U B 7 58.903 10.812 58.289 1.00 49.24 O
ATOM 4 OP2 U B 7 58.653 11.474 55.827 1.00 34.01 O
ATOM 5 O5' U B 7 56.906 12.064 57.518 1.00 45.87 O
ATOM 6 C5' U B 7 56.415 12.250 58.839 1.00 56.49 C
ATOM 7 C4' U B 7 54.945 12.597 58.814 1.00 65.59 C
ATOM 8 O4' U B 7 54.762 13.896 58.191 1.00 68.46 O
ATOM 9 C3' U B 7 54.042 11.674 58.012 1.00 66.26 C
ATOM 10 O3' U B 7 53.683 10.514 58.761 1.00 62.17 O
ATOM 11 C2' U B 7 52.841 12.576 57.758 1.00 67.95 C
ATOM 12 O2' U B 7 52.014 12.682 58.896 1.00 79.29 O
ATOM 13 C1' U B 7 53.520 13.925 57.508 1.00 64.46 C
ATOM 14 N1 U B 7 53.785 14.180 56.086 1.00 55.96 N
ATOM 15 C2 U B 7 52.826 14.863 55.362 1.00 46.77 C
ATOM 16 O2 U B 7 51.788 15.259 55.852 1.00 44.56 O
ATOM 17 N3 U B 7 53.132 15.064 54.041 1.00 40.02 N
ATOM 18 C4 U B 7 54.277 14.658 53.384 1.00 47.17 C
ATOM 19 O4 U B 7 54.410 14.909 52.185 1.00 49.31 O
ATOM 20 C5 U B 7 55.217 13.956 54.202 1.00 49.29 C
ATOM 21 C6 U B 7 54.946 13.748 55.493 1.00 53.17 C
ATOM 22 P C B 8 53.429 9.120 57.997 1.00 66.82 P
ATOM 23 OP1 C B 8 53.424 8.026 59.003 1.00 63.61 O
ATOM 24 OP2 C B 8 54.369 9.057 56.856 1.00 56.84 O
ATOM 25 O5' C B 8 51.959 9.266 57.397 1.00 69.98 O
TER
ATOM 2 P A A 4 46.113 19.527 46.174 1.00 72.81 P
ATOM 3 OP1 A A 4 45.148 20.615 45.878 1.00 67.90 O
ATOM 4 OP2 A A 4 47.559 19.731 45.884 1.00 50.14 O
ATOM 5 O5' A A 4 45.936 19.116 47.704 1.00 59.45 O
ATOM 6 C5' A A 4 44.637 18.878 48.235 1.00 61.16 C
ATOM 7 C4' A A 4 44.718 18.549 49.704 1.00 66.90 C
ATOM 8 O4' A A 4 45.387 17.275 49.889 1.00 69.91 O
ATOM 9 C3' A A 4 45.540 19.504 50.548 1.00 68.39 C
ATOM 10 O3' A A 4 44.799 20.664 50.889 1.00 72.82 O
ATOM 11 C2' A A 4 45.846 18.650 51.768 1.00 63.71 C
ATOM 12 O2' A A 4 44.749 18.564 52.655 1.00 60.73 O
ATOM 13 C1' A A 4 46.103 17.291 51.115 1.00 61.99 C
ATOM 14 N9 A A 4 47.519 17.078 50.821 1.00 56.60 N
ATOM 15 C8 A A 4 48.172 17.187 49.616 1.00 54.69 C
ATOM 16 N7 A A 4 49.458 16.933 49.688 1.00 51.85 N
ATOM 17 C5 A A 4 49.663 16.632 51.028 1.00 51.00 C
ATOM 18 C6 A A 4 50.812 16.275 51.754 1.00 47.84 C
ATOM 19 N6 A A 4 52.021 16.141 51.208 1.00 54.19 N
ATOM 20 N1 A A 4 50.676 16.058 53.081 1.00 46.97 N
ATOM 21 C2 A A 4 49.463 16.186 53.631 1.00 45.39 C
ATOM 22 N3 A A 4 48.307 16.508 53.054 1.00 52.56 N
ATOM 23 C4 A A 4 48.478 16.721 51.737 1.00 54.73 C
ATOM 24 P A A 5 45.564 22.061 51.080 1.00 66.57 P
ATOM 25 OP1 A A 5 44.532 23.092 51.352 1.00 77.69 O
ATOM 26 OP2 A A 5 46.500 22.235 49.939 1.00 65.30 O
ATOM 27 O5' A A 5 46.415 21.847 52.408 1.00 59.16 O
TER
ATOM 1 O3' U B 6 59.158 13.187 57.607 1.00 42.03 O
ATOM 2 P U B 7 58.452 11.784 57.264 1.00 48.49 P
ATOM 3 OP1 U B 7 58.903 10.812 58.289 1.00 49.24 O
ATOM 4 OP2 U B 7 58.653 11.474 55.827 1.00 34.01 O
ATOM 5 O5' U B 7 56.906 12.064 57.518 1.00 45.87 O
ATOM 6 C5' U B 7 56.415 12.250 58.839 1.00 56.49 C
ATOM 7 C4' U B 7 54.945 12.597 58.814 1.00 65.59 C
ATOM 8 O4' U B 7 54.762 13.896 58.191 1.00 68.46 O
ATOM 9 C3' U B 7 54.042 11.674 58.012 1.00 66.26 C
ATOM 10 O3' U B 7 53.683 10.514 58.761 1.00 62.17 O
ATOM 11 C2' U B 7 52.841 12.576 57.758 1.00 67.95 C
ATOM 12 O2' U B 7 52.014 12.682 58.896 1.00 79.29 O
ATOM 13 C1' U B 7 53.520 13.925 57.508 1.00 64.46 C
ATOM 14 N1 U B 7 53.785 14.180 56.086 1.00 55.96 N
ATOM 15 C2 U B 7 52.826 14.863 55.362 1.00 46.77 C
ATOM 16 O2 U B 7 51.788 15.259 55.852 1.00 44.56 O
ATOM 17 N3 U B 7 53.132 15.064 54.041 1.00 40.02 N
ATOM 18 C4 U B 7 54.277 14.658 53.384 1.00 47.17 C
ATOM 19 O4 U B 7 54.410 14.909 52.185 1.00 49.31 O
ATOM 20 C5 U B 7 55.217 13.956 54.202 1.00 49.29 C
ATOM 21 C6 U B 7 54.946 13.748 55.493 1.00 53.17 C
ATOM 22 P C B 8 53.429 9.120 57.997 1.00 66.82 P
ATOM 23 OP1 C B 8 53.424 8.026 59.003 1.00 63.61 O
ATOM 24 OP2 C B 8 54.369 9.057 56.856 1.00 56.84 O
ATOM 25 O5' C B 8 51.959 9.266 57.397 1.00 69.98 O
TER
Atoms:
OP1: (45.148,20.615,45.878)
OP2: (47.559,19.731,45.884)
C3': (45.540,19.504,50.548)
C1': (46.103,17.291,51.115)
C5': (44.637,18.878,48.235)
O4': (45.387,17.275,49.889)
C8: (48.172,17.187,49.616)
O2': (44.749,18.564,52.655)
C6: (50.812,16.275,51.754)
C5: (49.663,16.632,51.028)
C4: (48.478,16.721,51.737)
P: (46.113,19.527,46.174)
C4': (44.718,18.549,49.704)
C2': (45.846,18.650,51.768)
C2: (49.463,16.186,53.631)
N1: (50.676,16.058,53.081)
N3: (48.307,16.508,53.054)
N6: (52.021,16.141,51.208)
N7: (49.458,16.933,49.688)
N9: (47.519,17.078,50.821)
O5': (45.936,19.116,47.704)
O3': (44.799,20.664,50.889)
OP2: (47.559,19.731,45.884)
C3': (45.540,19.504,50.548)
C1': (46.103,17.291,51.115)
C5': (44.637,18.878,48.235)
O4': (45.387,17.275,49.889)
C8: (48.172,17.187,49.616)
O2': (44.749,18.564,52.655)
C6: (50.812,16.275,51.754)
C5: (49.663,16.632,51.028)
C4: (48.478,16.721,51.737)
P: (46.113,19.527,46.174)
C4': (44.718,18.549,49.704)
C2': (45.846,18.650,51.768)
C2: (49.463,16.186,53.631)
N1: (50.676,16.058,53.081)
N3: (48.307,16.508,53.054)
N6: (52.021,16.141,51.208)
N7: (49.458,16.933,49.688)
N9: (47.519,17.078,50.821)
O5': (45.936,19.116,47.704)
O3': (44.799,20.664,50.889)
C4: (54.277,14.658,53.384)
N3: (53.132,15.064,54.041)
OP1: (58.903,10.812,58.289)
OP2: (58.653,11.474,55.827)
C2: (52.826,14.863,55.362)
C1': (53.520,13.925,57.508)
C3': (54.042,11.674,58.012)
O5': (56.906,12.064,57.518)
O4': (54.762,13.896,58.191)
C5': (56.415,12.250,58.839)
P: (58.452,11.784,57.264)
C4': (54.945,12.597,58.814)
C2': (52.841,12.576,57.758)
O2': (52.014,12.682,58.896)
N1: (53.785,14.180,56.086)
O4: (54.410,14.909,52.185)
O2: (51.788,15.259,55.852)
C6: (54.946,13.748,55.493)
C5: (55.217,13.956,54.202)
O3': (53.683,10.514,58.761)
N3: (53.132,15.064,54.041)
OP1: (58.903,10.812,58.289)
OP2: (58.653,11.474,55.827)
C2: (52.826,14.863,55.362)
C1': (53.520,13.925,57.508)
C3': (54.042,11.674,58.012)
O5': (56.906,12.064,57.518)
O4': (54.762,13.896,58.191)
C5': (56.415,12.250,58.839)
P: (58.452,11.784,57.264)
C4': (54.945,12.597,58.814)
C2': (52.841,12.576,57.758)
O2': (52.014,12.682,58.896)
N1: (53.785,14.180,56.086)
O4: (54.410,14.909,52.185)
O2: (51.788,15.259,55.852)
C6: (54.946,13.748,55.493)
C5: (55.217,13.956,54.202)
O3': (53.683,10.514,58.761)
Image (generated by PyMOL):